Array 1 136153-138562 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCDF010000002.1 Halomonas salicampi strain BH103 NODE_2_length_505455_cov_83.468179, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 136153 29 100.0 32 ............................. CCGGTCTGTCCGGTGCCAGCAGTTGCCGCATT 136214 29 100.0 32 ............................. GTTCCAGCCGCGAGCTAACCGCCATTTGGGAA 136275 29 100.0 32 ............................. TCATGGTGATCTGGCCCGAGTTCACCGGCTGG 136336 29 100.0 32 ............................. CGACCCGCTGAGCGTAGCCCCAAACACCAGAC 136397 29 100.0 32 ............................. CTTTCATCAGGGCTTGTCTCCACCAACTCCGC 136458 29 100.0 32 ............................. AATTGGAACACCTGAATAGCTGGACTGGGCAT 136519 29 100.0 32 ............................. CTTCCATTCCTTCCGCTGATTCGTTGCTTACG 136580 29 100.0 32 ............................. CGATGACCCGCCTGTGCGGTGGTAGCCTGCAC 136641 29 100.0 32 ............................. CATCTACGGCTTTTGGGGCACCTCTGTTCCAT 136702 29 100.0 33 ............................. ATAGACTTTGACTACATAGCGGCCAACAGCAGC 136764 29 100.0 32 ............................. TACGACGACATCGGCGAAGAACTAACTGAGCT 136825 29 100.0 32 ............................. TCGGCATCATCCAGAGTAAACGGCGGCAAGCC 136886 29 100.0 32 ............................. CTACTACCAGAACTACTTTACCGAAGCCGAGC 136947 29 100.0 32 ............................. CGAAAGGACTGAAGATCATGACGCAAAGATGA 137008 29 100.0 32 ............................. ACGATTGGTAAACACCACACCCGCCCACCGAG 137069 29 100.0 32 ............................. TACCAATTGATACCCTCGCCCGCGAGTGGAAT 137130 29 100.0 32 ............................. CGTTTGCATCTGCGTGTTTGCAGCTCAGCGAA 137191 29 100.0 32 ............................. GGAGAGCGTTTGCCCGCCAGACAGACGAACAG 137252 29 100.0 32 ............................. CTCGATACCATCAATATCGGAATAGACAGGGC 137313 29 96.6 33 ............................T GCCGGCGTGCAAACCACTTATGAGCATCGTTAT 137375 29 100.0 32 ............................. GATGGCTACGTGGTCGCATTTTGGTCGCAGAT 137436 29 100.0 32 ............................. AATGGGGCCAGCTACAAGAAGAATTGATGATG 137497 29 100.0 32 ............................. GCGATGTCGATATCCCGAAAAAGGTCAACGGT 137558 29 100.0 32 ............................. GCAGCGGTACCGATAACCAGCCGTTAGGGCTG 137619 29 100.0 32 ............................. TGACGGCAATAAGCGCAACGGTGACATTAGCT 137680 29 100.0 32 ............................. CACTGGGTACGGATCGGGATAGGCGCCTTCAT 137741 29 100.0 32 ............................. CTGATCCACAAAATCTTTGAAGAAGCTGAATA 137802 29 100.0 32 ............................. CACAAAGGGCCTGTTCTACGCTCCGACAGCGA 137863 29 100.0 32 ............................. TGGGTTACTGCGAATCCAAGGTTTACGCCATG 137924 29 100.0 32 ............................. ACCCGGCAACTGACCCTTACGGCAACCCATCG 137985 29 100.0 32 ............................. AACTGGCTGTTAAGACCCAGCAGGATTATGAA 138046 29 100.0 32 ............................. ATCACAGGCGCCCAAGGCAATACCGGGCTGTT 138107 29 100.0 32 ............................. TTCGTCAGCCAGTGGGGCGCGTTCGATGAAAC 138168 29 100.0 32 ............................. CGGCGGGCGGGCGCTGATGTATCGCCCCGATT 138229 29 100.0 32 ............................. ATCATCGAAGGCGACTACCTCGGAAAGCAGAC 138290 29 100.0 32 ............................. CCTTTGAAGAGCGTCAGCGGCAGATCAGTGAA 138351 29 93.1 32 ...........A...............A. CTCGCGGTACAGCGCCCGGCTTTGCTTATAGA 138412 29 89.7 32 .C.........A.........G....... CCGAAGCCCTGCGAGGCACCGCCCACCACGGC 138473 29 89.7 32 .C.........A.........G....... GCGTTCGAGATTCTTATGCCGAGAACGGGAAC 138534 29 96.6 0 .C........................... | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.1 32 CAGATCCCCGCGCCTGCGGGGATGAACCG # Left flank : GGCGATATTCAGCCGCCACCGCCAGCCCCCGACGCAGTGCCACCTGCGATTCCAGAGCCACCATCGGTCGGCGATGCCGGGCACAGGAGCGGATAAATGGCGATGCTCGTAGTTATTACAGAAGCTGTACCACCGCGCCTACGCGGTAGATTAGCGGTATGGCTTTTGGAGATTAGAGCTGGTGTCTACGTGGGCGACGTTAGCAGACGCATCCGTGAAATGATCTGGGAACAGGTAGAAGCGTTAGCCGAAGATGGCAACGTGGCAATGGCCTGGGCCAGTAGCCATGAATCCGGTTTTGAATTCCAGACTTACGGCGAAAATCGCCGAGAACCCGTAGACCATGACGGGTTACGTTTGGTGCGCTTTTTACCGCCACAAGTTAACTAGCTGATTTTATTGGATCTTTAATAATTTAGCTTGATTAAAAAGTAAGCAAAATAGCTGGTAGATTTTTTATCTGCTATTTTCTTCTTGTAGATCAACTGTCTACAACAAGT # Right flank : GTTTACGAACCTTGAAAAGCACAGCGAGGACGTCTTTAATCAGTGCTTTTTAGAACCTTAACAAAGTCGAAAGTGGCAATGCCTATACAGTTTGCGCCAACGCAACTGGATGTCTCCGCTGACTATTGCGCTGCTTGGTATCTAACAGTCAAGATCGGAAGGTTAATATGCGGGACCCTTTGTCGCTGATCGCGTGTTTGCTAGAGACGTTCCTGGCTATCCTCTACGCCCTCCCGCGTAGACACGGTTGGCTCATAGGCGGTATCGAAATATTCCTGATGGCCGCGTCAGTTATCCTTGTCGTCTCGTATCTTCTGCGATGAAATTGAAATCCGCGCCCGACTTAGATGGATCGCCTTAATAAGAAAGGGCATAAACATGTTGTGTTCTGGATGCGTATGCCGCAGAAAGGCGGCGAGAGAGCGTGATTAAAGCGCAAGAAATCCCGCCATTGAGCGGGTTTTTTTATGGGTGATGAGATGACGAAAAAAGGCTGCAAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGATCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //