Array 1 34592-32046 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBAP01000002.1 Fusobacterium necrophorum strain KG35 NODE_2_length_126804_cov_50.188314, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 34591 36 100.0 30 .................................... AATTCTCTAGTGAACAAAACTTCTCACGTG 34525 36 100.0 30 .................................... ATGTGTCAGAATTTAAAAAAGTATAGATAA 34459 36 100.0 30 .................................... TGATTACAAATTTTTCGATATGTATTTATT 34393 36 100.0 30 .................................... ACTATTCCCTTGACAGTATATCTCTTTATT 34327 36 100.0 31 .................................... TTATTCCACTGTCATAAAGATAACTATCTAA 34260 36 100.0 31 .................................... AAAGACAGAGATGATGAGTTAGCATTTGACG 34193 36 100.0 30 .................................... TGATTATTTGCAACTTGTGAAGAGCTTTGA 34127 36 100.0 30 .................................... AGAAATGCTACTGATGAATGAAAAGACTGA 34061 36 100.0 30 .................................... TTATTATTTAAGAAATGTTATAAAATTAAA 33995 36 100.0 30 .................................... AAAAAAGCCGTACATTCAATATCCCCGCTC 33929 36 100.0 30 .................................... GAAAGGTGTATTGTGAAGCGGATACGTTAA 33863 36 100.0 30 .................................... TGACATCGCCCGATTTTAGACAACAAAGAG 33797 36 100.0 30 .................................... TTGCAACTGAAAAGCAATGAACCAATCATT 33731 36 100.0 30 .................................... CTTTACTTCTGCTTTACCAACGCCGAGTTT 33665 36 100.0 30 .................................... TTTTCTTTTCTTATTTCTTCTTCAAGCTGT 33599 36 100.0 30 .................................... GAAGATAAAAAGTTGTATAAGAAATATTTG 33533 36 100.0 30 .................................... AAAAATAAAAAAAATAAAAAAAGTTGTTGA 33467 36 100.0 30 .................................... AAATTAAAAAGCATTATCGTGAACTATGTA 33401 36 100.0 30 .................................... TATGTTTACTGATATGAGTTTAACAGACTT 33335 36 100.0 30 .................................... GAAAAAAAAGCAAACTATAATTGCCTTACA 33269 36 100.0 30 .................................... TGTATCAGCGCTTCCTTTCAGAGCTTATAA 33203 36 100.0 30 .................................... CGTAGGCTTGGCTAAGTGTACGAGACCTCT 33137 36 100.0 30 .................................... AAAAGCCTTACATTCAATATCCTCGTTCTA 33071 36 100.0 30 .................................... TGTGTCTGCGTTGCCTTTCAGAGCTTATAA 33005 36 100.0 30 .................................... TGGGACAGTATATTCACTGTGTTCCTCCTG 32939 36 100.0 30 .................................... TCCACACATCAAGTACCTGATTTTTCTAGG 32873 36 100.0 30 .................................... CGTTTCGGAAGTCTCCTATTCATGTTTATA 32807 36 100.0 30 .................................... ACCAGTCATGACTGGCGCATTACCTGTAAG 32741 36 100.0 30 .................................... TGCGTGATGTGAGAGGTGGATTGCGTTATA 32675 36 100.0 30 .................................... CGTTTCGGAAGTCTCCTATTCATGCTTATA 32609 36 100.0 30 .................................... CGCTTCGGAAGTCTCCTATTCATACTAATA 32543 36 100.0 30 .................................... GTTTCAAAAATTTATGAAACGGTTTCGGAA 32477 36 100.0 30 .................................... GCTTGTCACAGAAATCCAAACAGCAGGTTA 32411 36 100.0 30 .................................... CTGTTAAGGAGAATAAGAGAATGTCAATAG 32345 36 100.0 30 .................................... CAATGTTTCCACAAAAGACGGTTTGGGACG 32279 36 100.0 30 .................................... CGCTTAGGAAGTCTTCTATTCATGCTAATA 32213 36 100.0 30 .................................... AAAATACATCATGGATAGGGTAGATAAAGA 32147 36 91.7 30 .................T..........T..G.... TTTACAAGAAGACGACTTTATTATCAATAA 32081 36 91.7 0 ............................TT.G.... | ========== ====== ====== ====== ==================================== =============================== ================== 39 36 99.6 30 GTTTGAGAGTAATGTAACTTAAGATAGAACTAAAAC # Left flank : TTTTTCATCAGCTAAAGGAATATACTTTAAAAGACGAGATATATGCAGAAAAATTGGAAATGGAAGGGGTCTTGAAAGGCTTTTTGTATAGAATAATAGATAACTTTTCTTATCCTTTAGAGATGGAAGACAATATAGAATATGAAGATTTATTTAAATTATTTCATATCCATATAAGTGAAGATTATGATAGTTATTTGGAAAAATTGATAGACTATTTGACATTATCGTATGACTTAGATTTAATGAAATGTGTTATTTTTGTGAATTTAAAAACAATTTTAGGAGAAGATGAATGTCGTAAATTATATCAACAGTGCTTTTATAAAAAAATTCCGATAATTCTCTTTGAAAATAGAGAATATGAATATACAATAAAAGAAGAAGAAAAAATTATTGTTGATTTCGATTTATGTGAAATTCGACTTTAATTCTAAAGTTACAACTACTTATCGTAAGAGTAGGTTATTCTTCTCAAAGTACGAATTTTCGTTTTTGAG # Right flank : TGTTAGAGCAAGCGAAAAAAGAAAAGATAAAAAGACATTTAAAGTATATGTAACTGAATTAGATTGTGAAATTGAGTATAATCCTATTTTGCGGCAAGAATATCTGGATATATTCGGTACAAAGGATGAAGAATTATGAAATTATATACAATAGCTGCCTGATTTTTAGAAATGACGACTTAATAAAAAAAATTAAAGTGTGAATTTAGCCCGGTTGAGGTTGTTGATAAAGTTTTCTGCGTCTTCAATTAAAACTATTTTTATAGCAATCTGAAATCGAAAATGGAGTCATATCGAAGTATGTAAAACTGATGCAACGTGATATAAAAAACTAATCAAGAATGATTGGGAAGTATTCACGATTGTCCATTATCTACAAAAAGGGCATAATTTGAGAGAGATCCAGTCATTGAGGTTTATAGAACTGTATTTTTTATATCAAAATATTGACTTTTTTAATCATACTGGAGTATAATAAGAAGAAAATGAGGAGGGATTGA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAATGTAACTTAAGATAGAACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //