Array 1 188003-184075 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGVY010000005.1 Klebsiella pneumoniae strain 5012STDY7312594, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 188002 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 187943 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 187882 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187821 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 187760 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 187699 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 187638 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 187577 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 187516 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 187455 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 187394 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 187333 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 187272 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 187211 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 187150 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 187089 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 187028 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 186967 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 186906 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 186845 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 186784 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 186723 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 186662 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 186601 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 186540 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 186479 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 186418 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186357 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186296 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186235 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186174 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186113 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 186052 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 185991 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 185930 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 185869 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 185808 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 185747 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 185686 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 185625 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 185564 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 185503 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 185442 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185381 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185320 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185259 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 185198 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 185137 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 185076 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 185015 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 184954 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 184893 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 184832 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 184771 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 184710 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 184649 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 184588 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 184527 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 184466 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184405 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184344 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184283 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184222 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184161 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184103 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //