Array 1 515-2428 **** Predicted by CRISPRDetect 2.4 *** >NZ_SGTV01000066.1 Halorubrum sp. SD690R NODE_66_length_4998_cov_44.778896, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 515 37 100.0 36 ..................................... AGATGTGTTCTGACCTAGTGACACAGCCGGAAGCGC 588 37 100.0 36 ..................................... GTCTTGGCGGTTGGTGTGTGGCTTACCTACGATATT 661 37 100.0 37 ..................................... ACGAAGATAACCGTGAGTAAGACGAGGAGCATCAGCG 735 37 100.0 34 ..................................... GGGACCGAATCCGAGCCCATGGACGTGTACGGGG 806 37 100.0 33 ..................................... GAGGACGGCCGGCTGGTCGTCGAATTGGAGGGG 876 37 100.0 37 ..................................... GGCAGCGCGCGAGCTCCAACACGGCGTCCCGCTCTTG 950 37 100.0 35 ..................................... CGCGGCTCGCGGGCGGCGTCCCAGCGGCGCGGCAG 1022 37 100.0 32 ..................................... GAGATACTCATCTTCGAATTCGCCACCCGACT 1091 37 100.0 34 ..................................... TCTTTCAGCCGGTCGATGGCGTTCGACGCGGTCG 1162 37 100.0 34 ..................................... AGTTCACTTTCGGGGACGGCTCGGCACCCGCGAC 1233 37 100.0 35 ..................................... GGTTCTGCTGAGAGCCACTATCGTCTCCACCAGTT 1305 37 100.0 35 ..................................... CAATCAGTCGCGATGGTAAGTGAGCAGATGGGTGA 1377 37 100.0 34 ..................................... AACCGCTGCTCTCCTCCGCGAGCTTGCGCTTCCC 1448 37 100.0 35 ..................................... CTGGCGTCGGTAAAGGAGAGCCAAGCGTCCGGGTC 1520 37 100.0 34 ..................................... TTGTCGATCGTCGGCAGGGACTGCTGAACCTGCG 1591 37 100.0 38 ..................................... ATGATGGATACGAGTGTGTCTACTGTGGCTCAGCTTGG 1666 37 100.0 36 ..................................... TGTTCGAGATCGTTTTTGTGGAGACGCTACTTCACT 1739 37 100.0 37 ..................................... GATGGGAGAAGGTAGACGAGGAGTGGGACGATATGTC 1813 37 100.0 34 ..................................... GGTTGTGATGGTCGTTCGACGGGTCTTCCATGCC 1884 37 100.0 34 ..................................... GCGACGCCGGCGTATGCGACCGACCTCACCGTTA 1955 37 100.0 36 ..................................... TCCCGGCCCACTCACGTCGTGTATGAGGTTCAGTCC 2028 37 100.0 35 ..................................... GGTCAGTCACGCCGCCGCCGAGCTGCGCGCCGAGA 2100 37 100.0 35 ..................................... GCCTTGGTGCGAAGGCGGGCGTGCTTGCGGGCGCG 2172 37 100.0 36 ..................................... GGACGTACTCGACTATGACCGACGACACCAACGTCA 2245 37 100.0 37 ..................................... TGTTGCGCGTCGCTCATAGGGCATCGATCATCGGTAG 2319 37 97.3 36 .....G............................... GCAAGCATGAACACGACACTCAACACAGCCGCGCCG 2392 37 86.5 0 .....G..........................TC.GT | ========== ====== ====== ====== ===================================== ====================================== ================== 27 37 99.4 35 GTCGCAGCGAGGAGAAAACCCAGCACGGGATTGAAAC # Left flank : CCGCTGCATTCAAGAACTCGTCGACCGAAGCTTCGTTTTGCAGGGCTTTGGAGCTTGTAGACACCGTCTCCAAACCCTGCTGCTTCGCACGTGAGGCTTTCTATGACAGGCTCATGCGCCTAGCAATCGCCTACGACGTGAGCGACGACAGGAACCGCCGGCAGGTGTATCGCACGCTCCAGCGGTACGGAGCCTGGCGGCAGTACAGTGTGTTCGAGGTCGATGTAACCAAGGCCGAGCGCGTCGAACTTGAAGACGAGCTTGAAGCCAAAATCGACCCGGACGACGGTGATCGCATCCGGATCTACCGGCTGTGTGAGTCCTGCCAGGACAAGACGACCGATATCGGTTCAGAGCCACCGGACGAACAGTCGAACGTGCTCTGAAATGGCTACGTCGACCCTTATTATAGGACTGTACAGCCCCGGTTGACGTAATCGGGGCATGATTTCGGCCACTGAGAAAGCTTTTTTACACCTATAGCTGTATTTTCACCCCCT # Right flank : TATTTATCTTATGATGATACAGTTTCTATTAACTAAATCCTCTGTATCTTACACCTACCGACCTACTAGATCCTGAGTATGTTGCCGGCTTGGTATCGTTAGTCCGAGATATCTGATCTCGACTATGTCGAGAAGGAAGTGCTTCTAACTACTTCATCTCATACCTGATTTGGGCAGATACCAATTTTGAACATCTACAATCGTAGATTACGTTGACGACAATATTACATGGGCCTTCGCGTCTTAGCATGCTGCGTATCCACGCAAAGCAGCCTCTATAGTGGTATTGCCACTGCCATTAGCATACAGCACTGCGAATTGAGAGTAGAGAGAGGCAGTATGTTTCAAAAAAGCGTGTGTGCTTGTTACTGTTGTTTGGTGTTTATGGCTCGTACGTCCGAAGGACTGTCTTTTCGCCGCCTATGTCCCCAATTATTTGGACATTGGAATCACTGTGTTCCACGGTTACAGTGTCGCCTACCTCTTCTAGAGTTCCAGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGCGAGGAGAAAACCCAGCACGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [13,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA //