Array 1 182111-179645 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPHZ010000001.1 Klebsiella pneumoniae strain CCBH27588 NODE_1_length_460124_cov_27.043250, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 182110 29 100.0 32 ............................. TCGCGCGTTGGGGCGCTGACGCGTATCGACGA 182049 29 100.0 32 ............................. ATGACTGGGCCTTATAATCACGGAAATAATCC 181988 29 100.0 32 ............................. AAAACGCGACAATCGCAATCAACAGTTATTTT 181927 29 100.0 32 ............................. CGCAATGAACAGTCTGGTCTGGTTATTTACTC 181866 29 100.0 32 ............................. ATCCCGCCGCAAAAATTACACGGAGAAATAAC 181805 29 100.0 32 ............................. AACATCCTCGACTGACACAGGGCATCGCTCTT 181744 29 100.0 32 ............................. AGTAAAGGGAAGCTGAGTCATGACAATCAGTC 181683 29 100.0 32 ............................. CGTGTCGGTCATGGCGATGCTGGGCGGCGATA 181622 29 100.0 32 ............................. CGCCTGGGGGGATCGCGGTGAGTGATTCATTT 181561 29 100.0 32 ............................. CGCCTCAACAAATGCGACTTCATAGCCTGCTG 181500 29 100.0 32 ............................. GCTCGGTGTGGCCTAAATCAATTCGCGGATCC 181439 29 96.6 32 ............................C CTTGCATACGTGTTACCCTCCATAACCTCACA 181378 29 100.0 32 ............................. CGTCGCCTGGCCGTCTGGTAAGTCCGGTTTTA 181317 29 100.0 32 ............................. CAGATATCGGCACCGCGAGGTTCTGAGTCGTA 181256 29 100.0 32 ............................. AGATCGAATAGTCGTAGTTTGTTTTACGGCAG 181195 29 100.0 32 ............................. CTGGAACGGACCCTGAGCGCCTTTGGGGGAAA 181134 29 100.0 32 ............................. ATTTCTCCGGTTGCCCCGGGTTCCCGGGGCAT 181073 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 181012 29 100.0 32 ............................. TGCAGACGCGGCACTTTTACCCACGCTTGAGC 180951 29 100.0 32 ............................. ATATTCCGAGCGTTGCCAGCCTGCTGCGCAAT 180890 29 100.0 32 ............................. GCGGCGGCGTTAGAGCGCGCGCCAGCGTTTTC 180829 29 100.0 32 ............................. ACGGCATCTGCGAAATTCATGTTGCTAAATAC 180768 29 100.0 32 ............................. GCTGCGTATAAAGGCTGCAGACCGGAGAGAGG 180707 29 100.0 32 ............................. ACTGCGATTCGTTGACGATTATTCCTCCGCGA 180646 29 100.0 32 ............................. CGTTATTTTAAAAGCTGACGGCGAAGTGGTGG 180585 29 96.6 32 ............................A GCGCACCCGAACCATTACGGGGCTTGCCATTC 180524 29 100.0 32 ............................. GCCGAGTTCGTCAATGCTATGAATTTTATAAC 180463 29 100.0 32 ............................. AGTGGCGTTAAAAATGTCGCGGGTAATTTGTT 180402 29 100.0 32 ............................. TGCTGATTTCGTTTGCAGGGAAAATGGATTTT 180341 29 100.0 32 ............................. GGCAGCGAGGCGCAGATCCCGCAGCTTTACCA 180280 29 100.0 32 ............................. TTCGGCCAATAACCGACTATGTGAGGGACTTT 180219 29 100.0 32 ............................. CCCGATAAATTCACTCTGTGTCATACGGTGAT 180158 29 100.0 32 ............................. ATCTGATCAGCGAATACATGAAGAACAACCCA 180097 29 96.6 32 ......T...................... GTTTGATCGGCGTCAGGACAATATCCGCGGGC 180036 29 100.0 32 ............................. TGATCCACGTAAGCAAGCAAAGTGATCCGCCA 179975 29 100.0 32 ............................. AGGAACCGTTCCGGCAGATAGCTCTTACGCTC 179914 29 100.0 32 ............................. GCATCGACGCCCGTATCGTTATCGACAAAATA 179853 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 179792 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 179731 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 179673 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGTGATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //