Array 1 148020-144569 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXRG01000183.1 Halomonas sp. ALS9 contig4_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 148019 28 100.0 32 ............................ TGCTGCTGGCAGAGTTGCACCATGCGGGCGGC 147959 28 100.0 32 ............................ CGTTGGCTGGCAGTAGAAGGCGACGACGAATT 147899 28 100.0 32 ............................ AGGGCCATTAGCACATAAGGGTCTTTAATCTG 147839 28 100.0 32 ............................ GCCAGGGCGTCGCGTTCTTGTATGACGGCTTG 147779 28 100.0 32 ............................ AATTGATGGTGGCGAACCGTACACGGGTTGGA 147719 28 100.0 32 ............................ TGTCCGGTGGGCGCGCTATCGGTGATATGCAC 147659 28 100.0 32 ............................ GGGGTAATGTCGCAATCAACCATATTGGCTCC 147599 28 100.0 32 ............................ GTGCAAACGCTTCAGCAATGGGAGTTCGCCGC 147539 28 100.0 32 ............................ CAAGGTCGTTTAGTTTTTTGCGGTTAGCTCCG 147479 28 100.0 32 ............................ AGCCGGGCAGTGCAGGCAGAACTGGAAAGTAG 147419 28 100.0 32 ............................ AGCAGCACGCCACCTGCAACACCCCAACCAAT 147359 28 100.0 32 ............................ CGGATGATTGGGCGGTTGCGGCGGGGATTGAG 147299 28 100.0 32 ............................ AACGCGCCCGCTTCAATATGCTGGATCTTGCG 147239 28 100.0 32 ............................ TGCGACAAGCTTAGCATTCACGAAAGATCGTT 147179 28 100.0 32 ............................ TCAAAACTGAACAAACTGGTTGAAAGGCACGG 147119 28 100.0 32 ............................ TGATTAGGCATAGCCTTCGCGAACTCTTCCGG 147059 28 100.0 32 ............................ TGCACCGAACGCACCCGCTCCTGGTATGAAGA 146999 28 100.0 32 ............................ TCGCAGCGCAAAACGCCAAGGCACACGCCGCG 146939 28 100.0 32 ............................ CAGCTGAGCTCTTCGGTTTCGCTCTGCTTTTC 146879 28 100.0 32 ............................ CGGACGTTTACCTATGCAAACCACAACCGAAC 146819 28 100.0 32 ............................ AATTACTGTCACCGCTGAACATTACGGGTACG 146759 28 100.0 32 ............................ GATAACGTTAGGACGGCGCTTAAGTTTGTACG 146699 28 100.0 32 ............................ GGATGCAGCGCCCAGCAAAGCGCTAGCAGCGC 146639 28 96.4 32 C........................... TGCTGCCGCCGCCCGGTCAACTGCTGAAACTC 146579 28 100.0 32 ............................ TGGTTAAGCAAGCACGCAGGTGGCACTCACAA 146519 28 100.0 32 ............................ ACCCCCAGCATATCAACGACCAGCCAGCACGC 146459 28 100.0 32 ............................ ACGAGCACGTCCAGGATGTTGGTCTTGGTTAC 146399 28 100.0 32 ............................ TAGATGCGCTCGCGCCTCCAAGCCTTTCAGAT 146339 28 100.0 32 ............................ GGCACCGGCGGCGCGGTGGTGGGCTGCATTGC 146279 28 100.0 32 ............................ CACAAAATAGGCCACCGCCCCAACTGGAAACA 146219 28 100.0 32 ............................ AAAAAGGTGGGGTATCGAAAAGCGCACTTAGT 146159 28 100.0 32 ............................ GAAGAAAGGAGAGCCGACGAAGACCTTCGGGA 146099 28 100.0 32 ............................ GGATCTCCCAAGCCGTAGGGGCGCGCCACTGT 146039 28 100.0 33 ............................ CCGCTGGGCGGCAATACTCGCACTGTTGACGAT 145978 28 100.0 32 ............................ TATGCCCGAAATGCCCCCGCTGCCGCAATTCC 145918 28 100.0 32 ............................ AAGTCGCCACGGCGTTGCAGCAGGTCAACGCC 145858 28 100.0 32 ............................ AGCGAGCGGAATATGCTGACGCCAGAGATTTG 145798 28 100.0 32 ............................ TGATCGACCAGCGCTTGCTGGATTTGCTCAAT 145738 28 100.0 32 ............................ TTCCTCTTTGGATATATTCAGCTGCTTAACGA 145678 28 100.0 32 ............................ CTGAAGGCAACTTGAACAAGGAAGACGTTTTA 145618 28 100.0 32 ............................ ACAGCGCCGCCTTTTTTCTATCTGAATTCGTA 145558 28 100.0 32 ............................ AGTGGCCGTGCGGAAGTTGGGCACCTCTGCGT 145498 28 100.0 32 ............................ GAAGCGCTGGAAAAGATCGAATCGCCGCTGGC 145438 28 100.0 32 ............................ AATTCGGACTCATTTATTCAGAGTTAGGTTCG 145378 28 100.0 32 ............................ GGCACGCGGAGGATCAAGCCCTTCACGTCATA 145318 28 100.0 32 ............................ TGTTTAGTCCCTACAGTGTAACGACTATTGTA 145258 28 100.0 32 ............................ AGCATCGTGATATGGCCCGGTAACGCCAAGGC 145198 28 100.0 32 ............................ TGCAGCCGAACAAGAGAACCAGGCTGACGAAT 145138 28 100.0 32 ............................ GCTCGGCTGCTGGCAGTAGGTGCGTTCGGAAT 145078 28 100.0 32 ............................ ATAAGAAGAGCTTTCGAGCGCTTGCTGTACGC 145018 28 100.0 32 ............................ AGACAAAATAAAACCGCCTCTTGGGCGGCTAG 144958 28 100.0 32 ............................ AGCGACACGGTTTGCTCGCCGATAATGCCGCG 144898 28 100.0 32 ............................ GTGTACATTTCCGACCAGCCGCCCGACGACGC 144838 28 100.0 32 ............................ GTGTACATTTCCGACCAGCCGCCCGACGACGC 144778 28 100.0 32 ............................ TGGTTAATGCCACGGACGGCATACCTGCCCCA 144718 28 100.0 32 ............................ CACGAGGATCGTTGTCCCGGTCTTTTCGGCAC 144658 28 100.0 33 ............................ AGAGGCGCAACTAGTCTTTACCATCGACTACAC 144597 28 78.6 0 .TG........CT.......T.....T. | G [144575] ========== ====== ====== ====== ============================ ================================= ================== 58 28 99.6 32 GCTCGCTGCCGTGCAGGCAGCTCAGAAA # Left flank : CGCGTTTGCAGCAGCTAATGAGTGCGGACTGGCTAACCGGTATGCGTGATCACGCTCAGGCGAGCGAGGTGCTTGCGGTGCCTGCTGGTGCTCAACATATCAACGTGGCGCGTAAGCAGTTCAATACGGGCAGCCCAAGTCGTGCCAAGCGCTATGCCAAACGGCATGACATCTCGGAAGAGGAAGCGCAACAGATTTACGCTAAGTTGGCCGAACGGCGTATTGAGCTCCCATTTGTGCAGATCAATAGCCGCTCCACACAGCAGCGCTTTAGCTTGTTTATTGAACATGGCAAACCGGCCGCATCTGCCACGGAGGGCACGTTTAGCCATTACGGCCTAAGCCCCAACGCCACGGTGCCCTGGTTTTGACCCTTTTTTTCAGCGATAAAATAGGACACTAATAATCAACCACTTAGCGGTATCGCTCAAAAAAGGGTGATACCGCTTTTTTCGGCTAAAGCTCTTTAACAATCAACACATTAATTTTGATATGCTCTA # Right flank : GATTTAAGGTATGTGCATCTGGCACCGCTGCGCGGTGCTTCCGCGGGTGCGCTGACGCTTACGCCGCGCTACTCGAAATGTGCACTGGGCGAGTAAGGTGGTCTGTGAACTATGATACGACTTAATGCTCAACAGGTTGAAATGTGACCGCTTCATCGAAACCGTACATGCATTGCTCTGGAAAGGCGTGCAGCTCGTTATCAGTCTCAATCGCTGCTGCGCGGCGGGCATCTCCATACGTTTCGTTCATCAGTTCAGGTAGTAATGCTTTCAAGCTGGGGTTGTCGTTAAGCAGGCGGGTTGTTTTGGCTTGAGCATCGATGATCGTCAACCGCCAGCTACGTGAGCGCTGTTCAGGCTGGTGATCCCATTTAAGCAGGTGCATTAACAGGCGAACCAGTTGACTGACCAGCAGGCGCCGTTCAGTTTTGCCCATGCTCTCAATCTCCTCGGCTAGATGCTCAAGATCAAGTTGTTCCAGTTTTCCAGCCCGCAGAAAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCGCTGCCGTGCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //