Array 1 2373305-2370164 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGKO01000001.1 Klebsiella pneumoniae strain NCTC13686, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2373304 28 100.0 33 ............................ CTCCTTTGCAGGGCTCACTTGATAAGCTTCATG 2373243 28 100.0 33 ............................ ATCAGCAATTCTTTGCGCTTTGACGCTCAGTTT 2373182 28 100.0 34 ............................ TCGACGTTCACATTAAAGCCGCACAGGCCAACGG 2373120 28 100.0 33 ............................ TGCGACTCACTATAAGAGACATTACTTGAGATT 2373059 28 100.0 33 ............................ CAGGCGTCTTTAGTCTATACTTTAAGATAGGCA 2372998 28 100.0 33 ............................ CACGAAGTAACCTGCAGTAAGATACAAATCGCT 2372937 28 100.0 33 ............................ CGAAGATGGCGACTGGATCGAAGCTTGACATCC 2372876 28 100.0 33 ............................ TACGACTCACTATAAGGAGACATTACTTGAGAA 2372815 28 100.0 33 ............................ CGCCATGCGATCGCTGTATATGACACGTTTGGC 2372754 28 100.0 33 ............................ TGCCTTCACTTGCCATCACGCTAAAGATGTCAG 2372693 28 100.0 33 ............................ TTACATGTGTTCAACAATGGCCCATTCCCGGGG 2372632 28 100.0 33 ............................ TCGTTTACAGGGTTAACGTTGAGCGCGGGGCGC 2372571 28 100.0 33 ............................ CAAGGCGTCTTTAGTCTATACTTTAAGATAGGC 2372510 28 100.0 33 ............................ TACGACTCACTATAAGGAGACATTACTTTGAGA 2372449 28 100.0 33 ............................ TGGTTGGTGTTTCTTTGAGTTGGACATAGGGTG 2372388 28 100.0 33 ............................ CAAGTAAAGATTATCCCTTTATGGCTAACAACA 2372327 28 100.0 33 ............................ CGCTATCGGCATCCGCAACGACGATTTCGAAGA 2372266 28 100.0 33 ............................ TTGTACTTTTTTGCAAATGGGCGTAAAAAAGCC 2372205 28 100.0 33 ............................ TGGTTGGTGATTGGTGTTTCTTTGAGTTGGACA 2372144 28 100.0 33 ............................ CCATTCTCTACTAGGCTGTGAAAACTTTCTTTC 2372083 28 100.0 33 ............................ CAAATTTAACAAGGCTCGCTTCGGCGGGCCTTT 2372022 28 100.0 33 ............................ TTCTACATGCCTGAGCATCCGCGCACACAGGAC 2371961 28 100.0 33 ............................ CATCGCAAGTTTTATATATTTCGCGTAATTCCT 2371900 28 100.0 33 ............................ CCCATAGGATACTTACAGCCACCGAGAGGGAGA 2371839 28 100.0 33 ............................ TACGGCAGCAAAAAGACAATGGACATCTATACC 2371778 28 100.0 33 ............................ CTCGGGGAGGAAAATTCGCTGATGGCAATCACC 2371717 28 100.0 33 ............................ CCGGTAACGATGGTGTTGAAGGTGTGCGTTATG 2371656 28 100.0 33 ............................ CCAGTTCCGCCAGCGCCTGGTATTCATAAGTCT 2371595 28 100.0 33 ............................ TCGCAGACCATACCCTCCCGTCAACTTCACTGG 2371534 28 100.0 33 ............................ CGGGTTAAACAACAGCTTACGCGAAAAAGCAGT 2371473 28 100.0 33 ............................ CTTCAACGAGCAGCCGGTTGGAGACGAGGCTTT 2371412 28 100.0 33 ............................ CTTCAACGAGCAGCCGGTTGGAGACGAGGCTTT 2371351 28 100.0 33 ............................ TAAAAAAGCCTGCGGTTAGGCAGGCAATAAGCA 2371290 28 100.0 33 ............................ TCGCGAGGTGCGCCAGTCGCGCATTAAGGAGTT 2371229 28 100.0 33 ............................ CGTGGCGCTGGTGGCGCGCATCGTATCGTCGCA 2371168 28 100.0 33 ............................ TAAAATCGCAGGGGGCGCCATCAGGAGCGTCGC 2371107 28 100.0 33 ............................ TGAGCGAGCTTTCAGCCCCGTCCAGGTACCTTT 2371046 28 100.0 33 ............................ CTCGTTAACCAGGGCGGTTAGCTTCACATCACC 2370985 28 100.0 33 ............................ TTACTGTGAAGACGGCTGATGGTAACCACGTGG 2370924 28 100.0 33 ............................ CCATTTCCAGTTCCGGTGCCGAGATGAACACTT 2370863 28 100.0 33 ............................ CGTATGAACCCAACCGATGGTCACAATCTGCCT 2370802 28 100.0 33 ............................ TGCCACGATCAGTCAGTCAGCGGGCAAGTGGTA 2370741 28 92.9 33 ......................G.G... TGAGGAAAAAACTGATTGGCGTGATCGCCGGCG 2370680 28 100.0 33 ............................ CATAAGCAACTGCATGTAGTCTACGCTGTAATA 2370619 28 100.0 33 ............................ CGAGAAGCGCAGCAGAGGATCGACCAGGCGCGC 2370558 28 100.0 33 ............................ TTAAATTAGCCTCTCACGATAAAGGACTCGGTG 2370497 28 100.0 33 ............................ CACCACGAATATTTCGGTAAGTAAATGCTGTGG 2370436 28 100.0 34 ............................ CTATTCACTCTACACCACATTTTTTGACGGTACG 2370374 28 100.0 33 ............................ TGCCGACTTGGGACGAGGACCCGGAAGAATGCA 2370313 28 100.0 33 ............................ CACTGCGCGCATTGAGTCGCTGGAGTACACCAA 2370252 28 100.0 33 ............................ TGGAATGCTGGTCTGGCGCAGGAGTCATGCGAG 2370191 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 52 28 99.9 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TATTGAGATAAATATTCATTGTTTAAGTCAGGGAGTTTTTGGGTGGGGTAAAAATTTCCCCAGGCTGGGGTAAATTCTACCCATAATCATTACTATTCATTACTAATCAAAACTAATAAAAGAATAGAGTCAAAAAGAATCGCTGAAAGAAAAGGTAAGTCATCCTCTAGTTAACAAATAAAAAGAGCTACCTAAGTAGCCCTTCATTCTCTTCAGAGTCACATAGCATACGGCCTATTTCAATCTCTCTAACCAGAAATGAGCTTTATCCATTGCATCTTTATATTCACCATATTTACGTGCTTCATCCATTTCTTTACCCCATTCTTTCATTATGGCTTCATAGGTTCCATTCTCGATGGAGCGTTTCGTTAACTGGTTTAGCATTCTCATTCCTTCTTCGTGTCTCACTTTTTGCCAGTGGGTTAACTCTTTCTCTGGATTGGCCTCAGCTTCACGCTTCAGGGCTTGCTCGCGTTCCTCAGCGAAGAGTTGAGACA # Right flank : TTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGAAAGAGGGTAATGACTCCAACTTACTGATAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGTGACTTCCGTCCCAGCCTTGCCAGATGTTGTCTCAGATTCAGGTTATGTCGCTCAATGCGTTGAGTGTAACGCTTGCTGATAACGTGCAGCTTTCCCTTCAGGCGTGATTCATAAAGCGGCCAGCCATCCGTCATCCATACCACCACATCAAATACCGACAGCAGCTCCAGAAGACGCTCCAGTGTGGTCAGAGTACGCTCACCAAAGACGTGTGCCACCACCGTCCTGCGCATCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //