Array 1 930-49 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJSZ01000139.1 Flavobacterium psychrophilum strain NNS6-1804 contig00139, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 929 46 100.0 29 .............................................. TCTCTGCTTCTAATGAACAGACTCTTTAT 854 46 100.0 30 .............................................. CAGGTAAAAATCTAATAAGCGTACCAGGTA 778 46 100.0 30 .............................................. CGTAACTGATCCACCGTGATTTACGTTTCC 702 46 100.0 29 .............................................. ATAAAAAAGAAATAGAGAGTATAGATAGT 627 46 100.0 30 .............................................. TTTTTTTAAAAACAGATAAAGAGCAACTTC 551 46 100.0 31 .............................................. TGATGTTGTGGTTTATGATTTTGGTGATAAT 474 46 100.0 30 .............................................. ATAGAAGATCAGCAAGAACTAGATAGTTTA 398 46 100.0 30 .............................................. TTTAACGTTATGGTGCATTAGCAAAAAATA 322 46 100.0 30 .............................................. TATCTGTTTGTTTGGTATCATTGCGGGTGC 246 46 100.0 30 .............................................. GTTTATAAATGGAATGTATTTTAAAGTTCC 170 46 100.0 30 .............................................. TGTACAATTGTTCATTTTTTGGTCTAGCAA 94 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 12 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : CTCCGGAGTGACTGGAGTTCAGACGTGTGCTCTTCCGATCTG # Right flank : CAAATATGCTTTCGTTTATGCCGACTAAAGCGTTGTGAATTGCTTTCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 38-538 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJSZ01000146.1 Flavobacterium psychrophilum strain NNS6-1804 contig00146, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 38 46 100.0 30 .............................................. TGATTATGAGGTTTCTAATATAGAAAGGTC 114 46 100.0 30 .............................................. AATCCCCCAGAAAACAAGCTAAATGATTCC 190 46 100.0 29 .............................................. TTGTTCAATTTAATGAATAAGGTAATTGT 265 46 100.0 30 .............................................. GGATAAATAGTATACGGCAAATCTAACTGA 341 46 100.0 30 .............................................. CCATTTGGGAAGCACAATTTGGCGATTTCA 417 46 100.0 30 .............................................. TAATTTAGAATTTTTCATTTTCCCTCATGG 493 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 7 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : GAGTGACTGGAGTTCAGACGTGTGCTCTCCGATCTCTG # Right flank : AAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGGAGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 8611-8033 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJSZ01000080.1 Flavobacterium psychrophilum strain NNS6-1804 contig00080, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 8610 46 100.0 30 .............................................. AAATATGCTTTCGTTTATGCCGACTAAAGC 8534 46 100.0 30 .............................................. TTACATACATAATCAATGGATATGGTTGTT 8458 46 100.0 30 .............................................. CCTGAATAGATTCTTTTCCGTATTGTTTTT 8382 46 100.0 30 .............................................. TCAAAGAATATAAAGACGCTAAAGATGCTG 8306 46 100.0 30 .............................................. TCACGATGTATTTAGAAAATATGGTTATCC 8230 46 100.0 30 .............................................. TGCTTGTAGTAGCTGTTAGTGGCATACCAC 8154 46 100.0 30 .............................................. CGCAAAAATATTATTACTAGGAGCAATCCT 8078 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 8 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TTTTAGCTTATAATTACCAACTGTACAATTGTTCATTTTTTGGTCTAGCA # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 1836-45 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJSZ01000061.1 Flavobacterium psychrophilum strain NNS6-1804 contig00061, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1835 46 71.7 29 A.AA.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG T [1831] 1759 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 1683 46 100.0 29 .............................................. AAGTACATCCCCAGTATTGAAACTATGCG 1608 46 100.0 30 .............................................. AACACCCAAACATAAGAGATGAAACATAAG 1532 46 100.0 30 .............................................. GCAGACGCCCAAGGAATACAAGCAGCTGCA 1456 46 100.0 30 .............................................. CAGTTTTTTGAAATGGGTGTAGATATTCTT 1380 46 100.0 30 .............................................. TTGTCCATTCTAGCAGGTAGTAGAGATATA 1304 46 100.0 30 .............................................. ATTTCTTCATTAAGAAGCCGCACGTTAATA 1228 46 100.0 30 .............................................. AAGTCGTGAATAAAGATATACACGACCCTC 1152 46 100.0 30 .............................................. ACTATGATTTTTAATAATCGGATTACCTGC 1076 46 100.0 30 .............................................. TTTGAAATCTTTTCTTGCTTGTTCAGTTAA 1000 46 100.0 30 .............................................. TTTGGATCATTCCGCATATTTGCATCATGC 924 46 100.0 30 .............................................. TGAAACTATTGAGGTAACAAATGAAATGTA 848 46 100.0 30 .............................................. ACGACCTACCTTATTAACAAATGACTTTTC 772 46 100.0 30 .............................................. ACGAATTAATAGCTTTTAATAACGCGTTAT 696 46 100.0 30 .............................................. CTTTTGTGTTGTTTTATGTTGTACATTCGC 620 46 100.0 29 .............................................. TAGATAAAAGAACCTTTTGTTCGTCTTTT 545 46 100.0 30 .............................................. CTTTCGCAAAAGGAGTTGATTCAAAAAATG 469 46 100.0 30 .............................................. AGAATAACAAGAGATACTAATACATCATTT 393 46 100.0 30 .............................................. CTATTCATTGAATAAGCATTGAAGGTATCA 317 46 100.0 30 .............................................. TTGATGACTGGGAGAGCCATTATGACGTAG 241 46 100.0 29 .............................................. ACATTACAATATAATTACGGCTTTGAATA 166 46 100.0 30 .............................................. TTTGCCCAACAGACCCTTCTCCTAATTCCG 90 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 24 46 98.8 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ACTTTGCGGGATAGTGTCATCA # Right flank : CAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGGAGAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //