Array 1 597-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVWU010000020.1 Gordonia paraffinivorans strain F9-ML765/3 NODE_20_length_86415_cov_121.458153, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 596 36 75.0 36 .....GCC....T...C..A..T....T....A... GCTGGCCGCCGTCAGGACTTCCAGTTCGGATCGCTC 524 36 88.9 45 .......C............T.T.........A... GCGGTCCACGATCGGCACCGTCATGTACTCGGTCAGTTCGTCGGC 443 36 97.2 40 ................................A... CGGCGGCGGAGAACTGCTGGAACTTGCCTTCGGCATCCTC 367 36 100.0 39 .................................... CGCGGTTGCCTTCCTGGTGGCCGGGGTAGGTTGATGCCT 292 36 100.0 36 .................................... CCACCGCCATTCACTAGCCACTCTCCGTAGTGCTTG 220 36 100.0 39 .................................... GGCGGTCATCACCGGTGTTCTGGCAACCCGGTCGAAGGT 145 36 100.0 37 .................................... TCGAGGAAACGGGCAGCGTGACTCTGTGCAATATCGG 72 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================= ================== 8 36 95.1 39 GCCTCAATGGAACCCGGTCGCGAAGACCGGGAGCAC # Left flank : GGCCTCACGATCAACGGCGCGAACGTCCTCGCCTTCGACCCGACCCTGAGCTACGACATCAAACGCGTCCAGGGCGCCGGCGCGCTGGGCAACGCCGGCATGTTCAACTGCGTCTTCACCGGCCGGGGGCGCATCGCGATCACCACCGACGGCTCACCCGTGGTCCTCAACGTCGATGCCGCGACCTACGCCGATCCGCAGGCCGCGGTCGCCTGGTCGTCGAGCCTGCGCACCTCGATCAAGACCAACGACTCGTTCAACCTGGGCACACTGATCGGCCGCAGCACGGGCGAACGATTCACAATCGCCTTCTCCGGCCAGGGCTTCGTCGTCGTCCAACCGTCGGAACTGCCGCCGGGCGGCTTCATCGGAGGCACCGGAGGAGGCGGCGACGCCGGCGTCGGCGGGATGCTGGGCGGGTTCCTGGGGCGGTGAGACAGAGCGCCGACGGTGATGCCCTAACACCGCCCACAGAAACTCCTGCGAAATGCGTACTTCTG # Right flank : CCTACTGCCGACGCGGGCACCATCACCACCAGCAGGC # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGAACCCGGTCGCGAAGACCGGGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.30,-14.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,1.01 Confidence: MEDIUM] # Array family : NA // Array 1 40799-39134 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVWU010000036.1 Gordonia paraffinivorans strain F9-ML765/3 NODE_36_length_40839_cov_123.038492, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 40798 36 100.0 35 .................................... AGGCTGCCGACGCCGCGATCGGCGCGGCGAAACGT 40727 36 100.0 39 .................................... ATGATGCCGCGGGTGCGGGTGGTCAGTCCTCGGTCTGCC 40652 36 100.0 41 .................................... CCGGGCGCGGCCTGCGCGCCGATGCGCTTTGCCTCCAGCGC 40575 36 100.0 38 .................................... GCGGCACCGATCGGCACCATCGCCGGGGCCATCTGCTG 40501 36 100.0 35 .................................... CTGCAGCGAGCCGGCGCCCGACTCGGCGAGGTTCT 40430 36 100.0 35 .................................... ATCATGATCCCCCTGAACGACTCAGCCACTATTTT 40359 36 100.0 36 .................................... GACATAAGAGCGAGGTCGCTCTCGCACAGTCCGACC 40287 36 100.0 35 .................................... AGTACGCGGTCACCAGCAGCTACGTGTCCCACACC 40216 36 100.0 38 .................................... CGGGATGTGCGTGTGCGAGGCACGTCACCCAACTGTTC 40142 36 100.0 41 .................................... CCAGCTTCAACACGAAACCACCAGCCTGCCTGCTCATGTTG 40065 36 100.0 37 .................................... GGTGTCGGAGGTCGCCACATAGATGGCGGTGGTTTGC 39992 36 100.0 38 .................................... CTGTTCACTGTGGCGTGGATTCTCCTGCTGGGCGGGTT 39918 36 100.0 38 .................................... CTGGCGATGTCATTGCGCTCGGTTTCGATGGTTCGCGC 39844 36 100.0 43 .................................... GGAGAGCTGGTTGACGGGCTCAGAGAGTGATCCCGTTGATGTC 39765 36 100.0 38 .................................... CCCTCATCGCCCTCAGCCGGGGCCTCCTTGATGACAGC 39691 36 100.0 41 .................................... ACCTGCCGTGCGTGCGACGCCCCGGCTGGCGAGTCATGCCG 39614 36 100.0 35 .................................... ACGTCGTCGTCGGCGATGTGGTCGGCGGGGTTGTG 39543 36 100.0 39 .................................... CAGTAGTCAATCAGCCAGTGCCGCGCAGCAATCAATAGT 39468 36 100.0 39 .................................... GTGCCTGAGAACCGGCAGATAGTTCGACGTATCCGAATA 39393 36 100.0 37 .................................... CTTCGACGATTCCGAAGATACTGTCGATCTTGTGGAT 39320 36 100.0 38 .................................... CCGACGACCAGCAACACCTGTGGCGGCAGAAGTACCGG 39246 36 100.0 41 .................................... ATGGCGGACGAGCTGGTTCGGAAGTCGAGGGTTCGCCTGGG 39169 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================== ================== 23 36 100.0 38 GCCTCAATGGAACCCGGTCGCGAAGACCGGGAGCAC # Left flank : ACGTGCCTGAGAACCGGCAGATAGTTCGACGTATCCGAAT # Right flank : CGCTCGCACAGATTACAGGCTTTGACCTGCCAGAATTCAGGCGGTTGCGAGAGGTGCCGAGCAACACATCCCTCTTGGCACAGATCTTCACATCTGAAGTTCTCAAAGAACGCACCGACCAGCATGCGAGCAGTCCCCTGGGTTGCTGCCGTCAAGTCACCACTCGCAAGCCGCTCATATGATGGCCGGCCCGGATTTCGGCAGGTCACGGGGACGTCCCAGCTGTGTTACGGATGCGGCCGCCCCTTCTGGCCCGAGGTCGATCATCACGACAGAATCCTCACCGTAATCGATGACCTCATGAACATCCGCCCTCCAGCGCACCAACTCTAGCTTCGACAGATCGCACAGGAACACGGAGTACTGCAGTCGCTGACCGTACGCCTCCATAACCCTGCACACCCGTCTAAGGCGGGCCGGGTCCGCAATGTCGTATGCGATGAGATACCGCCGCCTCGCCACCGCGAATCACCTCGTCATCATGGGTGTATAGGTCGGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGAACCCGGTCGCGAAGACCGGGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.30,-14.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA //