Array 1 196387-192459 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEHI01000002.1 Klebsiella pneumoniae subsp. pneumoniae strain M1A NODE_2_length_386826_cov_85.7736, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 196386 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 196327 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 196266 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 196205 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 196144 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 196083 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 196022 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 195961 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 195900 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 195839 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 195778 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 195717 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 195656 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 195595 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 195534 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 195473 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 195412 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 195351 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 195290 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 195229 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 195168 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 195107 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 195046 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 194985 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 194924 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 194863 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 194802 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 194741 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 194680 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 194619 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 194558 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 194497 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 194436 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 194375 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 194314 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 194253 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 194192 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 194131 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 194070 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 194009 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 193948 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 193887 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 193826 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 193765 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 193704 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 193643 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 193582 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 193521 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 193460 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 193399 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 193338 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 193277 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 193216 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 193155 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 193094 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 193033 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 192972 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 192911 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 192850 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 192789 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 192728 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 192667 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 192606 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 192545 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 192487 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //