Array 1 5168-2920 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQZV010000016.1 Halomonas meridiana strain IOP_44 contig16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5167 28 100.0 32 ............................ GCATCTATGCCGAGCCGGTCCGCGAAGCTGGC 5107 28 100.0 32 ............................ TTCTGCGTGGAGAGCGCTATGCCGCTTGGCGA 5047 28 100.0 32 ............................ CATGGAAGCCGTCAATAAGAAGATTCTCGACC 4987 28 100.0 32 ............................ TCTTCGCGGGCGATCTCGTCGAAGACCTCGTC 4927 28 100.0 32 ............................ ACAGCGCGTCGGTGGCCACCCGCTGCACCACC 4867 28 100.0 32 ............................ CTGGCTTCGACGATCATCTCGTGCAGGTCGTC 4807 28 100.0 32 ............................ GGCCTGGCCGACAAGATCGGCGGGCTGATCGG 4747 28 100.0 32 ............................ TGCTTGCCGCCGGAGCCGCCGACGGTATGCCG 4687 28 100.0 32 ............................ GAGATCAATTATTTGAAGCTGCAGGTGTTCTG 4627 28 100.0 32 ............................ TCACTTGGACGTTTGGTTTGACTCCGAAGCTC 4567 28 100.0 32 ............................ TTGATGTCCGCAGCCCGGCCCAGCACATGCTG 4507 28 100.0 32 ............................ GTCCACCTCTTGCCAATCACGCATGACCTCTT 4447 28 100.0 32 ............................ TCCCGCACATCACCACCCAGCACCATCTGCAG 4387 28 100.0 32 ............................ GACGCGCCCGAGCTCCTGGTGCCGATCACCGG 4327 28 100.0 32 ............................ TCTGCTTTCTGCGCTTCGGTGGTGGGGTAGTC 4267 28 100.0 32 ............................ ATCAACCCAGAGCGCGGCAGCTTAGGCCTCAC 4207 28 100.0 32 ............................ TGCAGCGGCGCAGCGATGGCGGGTGGATCGAG 4147 28 100.0 32 ............................ ATGATGCTGGCCAAGCTACGCCGCGGCCAGAC 4087 28 100.0 32 ............................ ACCACCTCGATGAGGTAACTCGCAATGGAAAT 4027 28 100.0 32 ............................ AGCACGACGCGGCTAGCGGAAAGATCCGCCAG 3967 28 100.0 32 ............................ ACACAGCGCCCCACGTCGGGCGCTTAGCCCGT 3907 28 100.0 32 ............................ GCCGGTCAGCGAGTCAAAAATGCCATAGTGGC 3847 28 100.0 32 ............................ AGCAAGGTTCGCTGGAAGAAAGACACCGAATT 3787 28 100.0 32 ............................ TTGATTCCAGCAGCGTAAAAACGTCATCCCTT 3727 28 100.0 32 ............................ AACTACGCAAAACCAGGAGACCGAATACTAGA 3667 28 100.0 32 ............................ CATCGACGAAGAGGGGCATCCCGACGAACCAC 3607 28 100.0 32 ............................ TAGCCGCCATGGTTGGAGCGATGCAGTCAGGA 3547 28 100.0 32 ............................ ATTACCTCAACGGATGCGCCTTCGTTATCGGT 3487 28 100.0 32 ............................ CGCATACAGGCCGCTGCGATTAAATGCGATAC 3427 28 100.0 32 ............................ AAATAATGAGCGACTGCGTTGGGCGTAACCAC 3367 28 100.0 32 ............................ AGGAGGCCGTAAGGCCGAAGAGCGCCGCGAAG 3307 28 100.0 32 ............................ GGCAGGCAGTGGCCGCCGACCGCGCCCATGTG 3247 28 100.0 32 ............................ TAGGCGTTGACCGCATGACTATCGCTAACATC 3187 28 100.0 32 ............................ CATGCCGAGACGCGCAAAGACTTGGAGTTATC 3127 28 100.0 32 ............................ TGGGTGACAGGTGTCGCGCCGTTGGCCACCAG 3067 28 100.0 32 ............................ ACGGTGGGCGGTGCCGTCACCATGACGTTTGC 3007 28 100.0 32 ............................ TGGTGGACTACCTAGAAGGCGAGGGCGAAGGC 2947 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 38 28 100.0 32 GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : AGCGACTAAAGCAGCTGATGGGTATGGATTGGCTGACAGGCATGCGGGATCACACGCAGGTAAGCGCAGTGTTGGAAGTTCCTGCGGGTGCTCAGCACATCAACGTGGCGCGGAAGCAGTTCAACACGGGCAGCGAGAGCCGTGCCAAGCGCTATGCCAAACGGCACAGCATTAGCGAAGAGGAGGCAAGGAGCATTTACGCCAAGGTGGCGGCACGACGAATTGAGCTACCGTTTGTGCAGATCAATAGTCGATCTACTCAACAGCGTTTCAGCCTATTTATTGAACATGGCAAACCTGCAGCGTCTTCATCGGAAGGCTCATTCAGCCATTACGGCTTGAGCCCCAGCGCCACCGTGCCCTGGTTTTGACCCTTTTTTCTAACATGAAAATAGGCAGATAATAATCAATGACTTAGCGGTATTGCTCCTGAAAGGGTAATACCGCTTTTTTTGGTGAAAGCTCTTTAATAATCAGCACAATAATTTTGATATACTCTA # Right flank : TTGAAATATCCAAGAGTGGATGGGCTTTTCTCTTCATTGTGTCGCGCACCGTTGGGTGCGTGGCCGCGCATCAGAAATTCCGCAACTACTCCTTCTCCTTCTCCTCATCCTCATCCTTATCCTCTTCCCAGCGTTCGATGGCGCGTTTGTCGTCGGGGAGTCGCACCATATCGCCCACGTTGAGATGTTGGTGTGACTGAAAACGGTGGCCGCGTTGGTCGAGAATGGCGGCCACGCTGCCAATGCTCACGGCATCTTCTTCGCGGTAGGCTTCTACTTTGACCCGCACAATGCGGCCTTGGTAACGGGCGGAAAGCACGGCACCTGGGTAGGGGGGCGTGTGTTCGGGGTCGTCCTTGAAGAGGGCTGCTACGCTGGCGCTGCCGGGCTCGTCCCATTCAATGTGCTTGTGCATGGTGAGCGTCCTTACTATGGGTGAATAAAAATAAGAAGGCTCGTTAAGTGTAGTGTGCGTTGGCAGAACTCGGCCAATCTAATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //