Array 1 2261881-2260258 **** Predicted by CRISPRDetect 2.4 *** >NC_017482.1 Lacticaseibacillus rhamnosus GG, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2261880 36 100.0 30 .................................... AAGAAACGATCCCGAGTTTCTGGATTGCTT 2261814 36 100.0 30 .................................... TCATCAGTATTCATGGAAATATAGGATGCT 2261748 36 100.0 30 .................................... ATCATCGAATCTTTGGGGACCTTACCACTT 2261682 36 100.0 30 .................................... GATTGTTTCGGTTGCTTCTGTGATGCCACC 2261616 36 100.0 30 .................................... ATGACTGGTTGCCGGTAAGCGATGAGTTCA 2261550 36 100.0 30 .................................... CATACTTGTATGAGCACTTTGACTTGTCAA 2261484 36 97.2 30 ....................T............... ACCGTTTGTGTTGCATGAATATGATCACTA 2261418 36 100.0 30 .................................... AGGTGCTATGCCGCTTGGCATGACGATTGA 2261352 36 100.0 30 .................................... AATAATATTGTGCCAAAAGGTAGTATTCTA 2261286 36 100.0 30 .................................... TCCAAGGGCATTCCAGATTGCAGAAGCCCC 2261220 36 100.0 30 .................................... GGGTGATGCTGACAAGATCAAGACGGCTGT 2261154 36 100.0 30 .................................... CGCCTTACGGGCGACAGCTAGGCCTATGGG 2261088 36 100.0 30 .................................... AGATCGAGCATTACGGCTTGCAAGACTGCG 2261022 36 100.0 30 .................................... ACAGTTGAGAAAAGAAAATACGCATTTAAA 2260956 36 100.0 30 .................................... AAAAACACAAATGGCCGCTGCCACCTTATG 2260890 36 100.0 30 .................................... AAAAAAGCCGCGGAACTTCTCGGGCTAGAC 2260824 36 100.0 30 .................................... CACAGTGCCATTCCACAAACCCGACAGAAA 2260758 36 100.0 30 .................................... CGAGCTTGCGGCCAATATCAAGCTATATGC 2260692 36 100.0 30 .................................... GTGTGATCATCATTACCTCTCTGCCACTAA 2260626 36 100.0 30 .................................... ATCGCATACTTCATGATGATTGATGCCAGT 2260560 36 100.0 30 .................................... CTGTGTTCTCACGTGTCAACAATTATTTCA 2260494 36 100.0 30 .................................... TTGTGGTGCCAAAACGGGTTGTTGTCGAGA 2260428 36 97.2 30 ...................................G TTTCAGCAAATATGACGTCTAACATGCCTC 2260362 36 94.4 30 ..................................AT ACTTGGAAAAGTTGCTATGCAGTTTGAATA 2260296 36 83.3 0 .......................AA.A....G..AA | T,CA [2260261,2260267] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 98.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTCCAACGCTTGATCATCAAGAAGGTAAGTCAATTGATAGAGGATCGGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTAAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTGAACAAGCTGTTAGATCAGGTTAAGGAAACATCGTTAGAATTACTTCTCATTGAATTTTCGGATGTCGAACGTAGAAAGTTTTTTGAGAGGTGCCAGTATATCTATATTGACAAAGATTTCATGGATAGCCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : CCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTATCAACAGGCGTTCAAATCCATTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAAGTTCAAACGGCATAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGTCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCTAAATTGGTACATTTGTATCGTAAAGTCGGCTTTCAGCAGCTGCCAGATCGGGAAACAACGATTAATGAGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //