Array 1 3306579-3309227 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAESWT010000001.1 Klebsiella pneumoniae isolate Kp1264, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3306579 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 3306640 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 3306701 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 3306762 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 3306824 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 3306885 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 3306946 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 3307007 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 3307068 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 3307129 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 3307190 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 3307251 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 3307312 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 3307373 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 3307434 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 3307495 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 3307556 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 3307617 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 3307678 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 3307739 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 3307800 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 3307861 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 3307922 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 3307983 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 3308044 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 3308105 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 3308166 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 3308227 28 96.6 32 .....-....................... CGATAACCGGGCGTTTCGACTGAACTCACCTC 3308287 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 3308348 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 3308409 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 3308470 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 3308531 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 3308592 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 3308653 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 3308714 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 3308775 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 3308836 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 3308897 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 3308958 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3309019 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3309080 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3309141 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 3309199 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //