Array 1 1385-2086 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACZMA010000014.1 Escherichia coli strain UoL_88 14, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
      1385	    29	 100.0	    33	.............................	TTTGGATCGGGTCTGGAATTTCTGAGCGGTCGC	
      1447	    29	 100.0	    33	.............................	CGAATCGCGCATACCCTGCGCGTCGCCGCCTGC	
      1509	    29	 100.0	    32	.............................	TCAGCTTTATAAATCCGGAGATACGGAAACTA 	
      1570	    29	 100.0	    32	.............................	GACTCACCCCGAAAGAGATTGCCAGCCAGCTT 	
      1631	    29	 100.0	    32	.............................	CTGCTGGAGCTGGCTGCAAGGCAAGCCGCCCA 	
      1692	    29	 100.0	    32	.............................	CCCACCAGCGCGTTTTTTGCCGGGGCCATAGT 	
      1753	    29	 100.0	    32	.............................	TTGAACTCAACACGATTGTTAATATGGACGAT 	
      1814	    29	 100.0	    32	.............................	GGGGGCGCATGACCGTAAACATTATCCCCCGG 	
      1875	    29	 100.0	    32	.............................	GGAGTTCAGACATAGGTGGAATGATGGACTAC 	
      1936	    29	  93.1	    32	............TT...............	CCCGGTAGCCAGGTTTGCAACGCCTGAACCGA 	
      1997	    29	  96.6	    32	.................A...........	GCAACGACGGTGAGATTTCACGCCTGACGCTG 	
      2058	    29	  89.7	     0	.T.........AT................	|                                	
==========	======	======	======	=============================	=================================	==================
        12	    29	  98.3	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   CGTGCTTGCCGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCTGTTTCACTGGGAGATGCAGGCCATCGGAGTAGCTGAAATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAAACGGGATTTGAGTTCCAGACATTTGGGTTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTGTCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA
# Right flank :  GGGCGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCCGCCTCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGAGCCTTATCAATATGTTGGTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCCGGGAAGGCAGGTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCCTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//