Array 1 15240-14948 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPCB01000063.1 Haloarcula sp. CBA1122 contig15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 15239 26 86.7 36 ----.......................... CTAATATCGGTGCAACCAGACTTGCGCTCACCGAGC 15177 30 100.0 36 .............................. CTTGAGATGCGGGTTGACACCAGCGGCGGCGGGCCG 15111 30 100.0 37 .............................. AACATCAAGCGCCAAGCGATCAATGAGGCGCTTCGGA 15044 30 86.7 36 ............T......T..A.....A. TTGCACCACCCTGCGAGTGTTCCCCGAGGTGGTCTG C [15028] 14977 30 80.0 0 ..C......A...GG.....AA........ | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 90.7 36 GTTTCAGACGGACCCTTGTGGGGTTGAAGC # Left flank : | # Right flank : TGTCACGTCTACCGTTTACTCCGGAAGCGGTGGTGTGTCTCTCGCTGCTGACCACCAATCACAGCCAGCGAGTCGGCACATTGGTTAGACGCTCGCGACCGTGCTCCCGACCCAGACACCAAGCGCTGCGCCGGCGATCCCCAGTCCCAGCAGCGCGTAGTTCGCGAGCGGGTTCTTCGCTTTGACTAAGTCAAGCGAGTAGCGCGTCTCGTCGACGGGACTTAGTGGCCGGACGCCCGCCGGCGTCAGTGCGTCGGCGGCGACGTGTGAGGCGATGGTTCCGGCACCGACGATGAACCCTGTCATGGCTGATACGACGGGGCCAGTGATGGTAAGCGCCACCGTACCCGACGCCGTGAGCACGCCGACCAGCAGCGCGAACCAGACCGTGTGGGTCAGGCCGCGGTGCGTGACACCCGGTACCCGCTGATCGAGATCAGGCACCATCGCGAGGGCAACCGCCGTGGCTCCGGCCATGAGGGCGAGCTCGACGAAGCCGG # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.30,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 26594-27012 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPCB01000045.1 Haloarcula sp. CBA1122 contig75, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 26594 30 100.0 36 .............................. GCGTCAGCCGATGTCCTCGTATCGACATCCATCACG 26660 30 100.0 36 .............................. CGCGTGAGTGTATGCAGTGCGGGGGCGACGTGCAGG 26726 30 100.0 36 .............................. TGGAGCGCGACGGCGACATGCCTCGTTGTTTGCGTT 26792 30 100.0 35 .............................. TATATCACTCATCGGCCCGGCTCACCTCAAAGCGA 26857 30 100.0 35 .............................. CCATCGGCATGATTGCGTGTTGATGATGTGTCATC 26922 30 100.0 32 .............................. CTAACGCGCGGCACACAACGGTCCGTGAAATG 26984 29 96.7 0 .............................- | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 99.5 35 GTTTCAGACGGACCCTTGTGGGGTTGAAGC # Left flank : GTGCTTCACCGCGTGCGCGTCGTCGACGATACGACGCGTTATGCCTGCCCGCCGGCACGCTCGGCACGAAGCGTGGAGCCCTGTACAAAGGCCACGTATCGGCCGAGATAGCGGTCGCACATCATACCGACCCCCGGGGAGAACACCAGCATTGAGAGCTGGGGCTGCACGGATAGTACGACACGAACAGCGGTTGGCCCTCCCGAGGATACGGGAACTTGTGGCTGGAAATCACATACCGCGAGGCCGCCTTGCGCGGACGGACGGAACTCCCGAGACGCACGAGCGGGTACCCCGCCGTATACAGAGGGTGGCTCTCCGGCCGCCCGTGAAAACGGAAAAAGAGACATCACACTCATTACGCATACTATCGAATTGTAGCGGCCTCGCATCACGCCTATTTCATCGACCCCCCGGGGGTGCAGGGGGTATTGAGGGTCGACGAAAGTACCGCTGTGGAAGCGTCCCAGAGAGTGGCTGTACTGCCCAGATCCGGCATG # Right flank : | # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.50,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //