Array 1 182459-179931 **** Predicted by CRISPRDetect 2.4 ***
>NZ_CAJHQL010000004.1 Klebsiella pneumoniae isolate Kp5158, whole genome shotgun sequence Array_Orientation: Reverse
Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion
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182458 29 100.0 32 ............................. TTAACCATTCTCCCCGGCTCAGTACCTGCCCG
182397 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC
182336 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT
182275 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA
182214 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC
182152 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA
182091 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA
182030 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA
181969 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA
181908 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA
181847 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC
181786 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT
181725 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG
181664 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG
181603 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA
181542 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG
181481 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT
181420 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC
181359 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC
181298 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT
181237 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT
181176 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC
181115 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT
181054 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC
180993 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA
180932 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC
180871 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC
180810 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC
180749 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA
180688 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC
180627 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT
180566 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA
180505 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG
180444 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG
180383 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT
180322 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG
180261 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC
180200 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG
180139 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC
180078 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC
180017 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT
179959 29 75.9 0 ...........ATTC...A......G..C |
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42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT
# Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC
# Questionable array : NO Score: 6.22
# Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat : NA
# Directional analysis summary from each method:
# Motif ATTGAAA(N) match prediction: NA Score: 0/4.5
# A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37
# Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37
# Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41
# AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27
# Longer leader analysis prediction: NA
# ----------------------------------------------------------------------------
# Final direction: R [0,5.92 Confidence: HIGH]
# Array family : I-E [Matched known repeat from this family],
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