Array 1 182459-179931 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJHQL010000004.1 Klebsiella pneumoniae isolate Kp5158, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    182458	    29	 100.0	    32	.............................	TTAACCATTCTCCCCGGCTCAGTACCTGCCCG 	
    182397	    29	 100.0	    32	.............................	GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 	
    182336	    29	 100.0	    32	.............................	AAATCAGCCAGCACCACGATTCTGGGAAATTT 	
    182275	    29	 100.0	    32	.............................	ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 	
    182214	    29	 100.0	    33	.............................	GAAACCCCATCAGATGACCCTCCCCATGTTGGC	
    182152	    29	 100.0	    32	.............................	TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 	
    182091	    29	 100.0	    32	.............................	TACAGAACGACTGAGGCGGCGTGTATTGCATA 	
    182030	    29	 100.0	    32	.............................	GATCTTAACTCTATTGCCAATGGCGCAATTCA 	
    181969	    29	 100.0	    32	.............................	GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 	
    181908	    29	 100.0	    32	.............................	AATGCAGCAACCGGCAAATATATCGCCGGTAA 	
    181847	    29	 100.0	    32	.............................	GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 	
    181786	    29	 100.0	    32	.............................	CCGCAATAACAAAAATAAATGAGGGTTAAAGT 	
    181725	    29	 100.0	    32	.............................	GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 	
    181664	    29	 100.0	    32	.............................	CCCCCGCGCACATGCTTAAACGCGCTATCACG 	
    181603	    29	 100.0	    32	.............................	GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 	
    181542	    29	 100.0	    32	.............................	CAGGTTAAACATGTAAAAAATGACCGTCGCCG 	
    181481	    29	 100.0	    32	.............................	CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 	
    181420	    29	 100.0	    32	.............................	TCCGCACAGTCAAACGCTCCAGACACCAACCC 	
    181359	    29	 100.0	    32	.............................	CCGGAACACCACCAGTAACAGCTACTGTAGGC 	
    181298	    29	 100.0	    32	.............................	TGACCCTGTTGATTTTGTTCCAGGTAATACGT 	
    181237	    29	 100.0	    32	.............................	TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 	
    181176	    29	 100.0	    32	.............................	GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 	
    181115	    29	 100.0	    32	.............................	GGACCCCGAGCGACCCGGTCACCCTCCGACCT 	
    181054	    29	 100.0	    32	.............................	CCGTCGAACGGCGGTTATATCCATCTTGAGTC 	
    180993	    29	 100.0	    32	.............................	ACCGATCCCACAATTGCGGCGGTTGAGATTGA 	
    180932	    29	 100.0	    32	.............................	TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 	
    180871	    29	 100.0	    32	.............................	CGATAACCGGGCGTTTCGACTGAACTCACCTC 	
    180810	    29	 100.0	    32	.............................	TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 	
    180749	    29	 100.0	    32	.............................	CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 	
    180688	    29	 100.0	    32	.............................	CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 	
    180627	    29	 100.0	    32	.............................	CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 	
    180566	    29	  96.6	    32	.............A...............	TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 	
    180505	    29	 100.0	    32	.............................	ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 	
    180444	    29	 100.0	    32	.............................	CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 	
    180383	    29	 100.0	    32	.............................	CACGTCCGGAAACCACGGGTTATCCGTGTAAT 	
    180322	    29	 100.0	    32	.............................	CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 	
    180261	    29	 100.0	    32	.............................	GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 	
    180200	    29	 100.0	    32	.............................	GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 	
    180139	    29	 100.0	    32	.............................	GTGATCGTCATGGATATCACTGCCGTTCCGTC 	
    180078	    29	 100.0	    32	.............................	CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 	
    180017	    29	 100.0	    29	.............................	GGGTTCACTTGGGTGAAACTGAACTAACT    	
    179959	    29	  75.9	     0	...........ATTC...A......G..C	|                                	
==========	======	======	======	=============================	=================================	==================
        42	    29	  99.3	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT
# Right flank :  GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [8-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//