Array 1 58642-57700 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LGOY01000003.1 Gardnerella vaginalis strain N153 2528313969, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
     58641	    28	 100.0	    33	............................	CTAAGGCTTTTTTGGCGTGTCGTAGCAGACTCT	
     58580	    28	 100.0	    33	............................	CTACTAGCGCGCTTTACTTGGTTTGAGACCTAT	
     58519	    27	  96.4	    33	.................-..........	TATTCTGCTTCCGCCTGCCAGCTGCCGCCACTA	
     58459	    28	 100.0	    33	............................	TTAGTAATTGCCCCTCGCTCCATGCGGGGGGTA	
     58398	    28	 100.0	    33	............................	CGAGAATACAAGTTGAAAATTAGTAATTGCCCC	
     58337	    28	 100.0	    33	............................	CAAATAACATGCGCTACGCTTAAAGTATTCTCT	
     58276	    28	 100.0	    33	............................	TTATATATAAAAGACTTCATAAAGGGGACGGCA	
     58215	    28	 100.0	    33	............................	CTAAAAGGAGCCTATTATGTTAGACGAGAACGG	
     58154	    28	 100.0	    33	............................	CGTGAAAGTATTGAATCTTGGAACGCGAGCCGC	
     58093	    28	 100.0	    33	............................	CAATTGCAGATCACTATCCTTTAGAACGCTTCG	
     58032	    28	 100.0	    33	............................	CTACAGGCGCGGCGTGGTCAAGCCGTCAGATAT	
     57971	    28	 100.0	    33	............................	CACGAGCTTTTTGCACACGTGGCTGATGCTATC	
     57910	    28	 100.0	    33	............................	TGTGCCATTTAAGGCGGAAAGACAAGTAGCGGA	
     57849	    28	 100.0	    33	............................	CATAGTCTTTTACAGCATTCACAAAGTATTCTG	
     57788	    28	 100.0	    33	............................	CAGTGCCTTTAAGGGCAATTACAAAAGACGGGA	
     57727	    28	  96.4	     0	..........................A.	|                                	
==========	======	======	======	============================	=================================	==================
        16	    28	  99.6	    33	GTCTTTCCCGCATACGCGGGGGTGATCC	                                 	       

# Left flank :   TTTATTCCTAATAAAATTATTGAGCTAACTGGTATTACAACTAATATGCTTGAGTCTTATGGTGTAGGATTAGATTTAGCATTAAGAGAATTCATTGATTTTATCGGAAAATTACCGATACTTGGATACAATATACAGTTTGATATGTCATTTTTGAATTCTGCTTTATCTTCATTAGGTGAAAGATTTGACGATTCTCTTTTAATTAATAAAATTTTTGATATCTCTCGTTTTGTAAAGAAAGAAAAGAAATTTTTAAAAAATTACCAGCTAAAGACGGTGCTGCACGAATACAACATTTCTGAATCCGTTCCGCATAGAGCTCTTCTGGACGCTAGACTAACAGCGCATCTTGTTTTTAATTTGAAAGGATTGTTAAAATTTATTTCATAAAAATAAAATACTGTTGTACCATGTTCTGTGATAGGTTGAATTTGAAAAGTAAATGAAATTTGACTGTTTCTGTTATGGAAATGGCCATTTTTATTGGGATTTTAAGT
# Right flank :  TATATAAATATTGTGATACAGTATAACCAGCGTGGGGACCTCGGCAACCAGCTTTCAAGACTGGAACATCAGTCTGAGGAGCACCCCACGTTTTTCAGTTTTTTGCAACGATTGAGCGAGAAAAGAAAAAAGGGTGGCGCGTTAATACCTTGTTCTCAGTTGTGGAAAATAAGAGAGGAGTGAAAAGCTAATGGATATGATGAAAATTTGTTATGACATGGTTGAGAAACTCCGTCCATATGCAGAACCTAACATGGATAAGCTCTCTAAAGAAGCAGCCAATAGTGCTATTAGAGCAGGCGAACCATCGATTGCGATTGATTATTATTTAGTAGACGCGTGGCTACACAAGAGTGCACCTAAAGAGTTGCTAATTGAAGCTTATAATTTGCTAGATTCTTATGAATGCGGCGATGACTATGACGATATAGCGGATGATTTAGGAGTCCCGCGTAAAGTTCATTCCCCAGATGAATAAAGAATAAATTTTATATTAAATC

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTTCCCGCATACGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-9.80,-9.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.78,4.77   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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