Array 1 3555886-3557929 **** Predicted by CRISPRDetect 2.4 *** >NZ_WMHU01000001.1 Klebsiella aerogenes strain CPEa1826 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3555886 29 100.0 32 ............................. TTCCTGGCCGGCTTCGCCATTCTGTCGGTTTT 3555947 29 100.0 32 ............................. CATGTAGTCAGCCATGTCTTCACGGATAGCGG 3556008 29 100.0 32 ............................. CCTGTACCAGACCATACATCGACCTCAGTTCA 3556069 29 100.0 32 ............................. GTGAAATTGTTTGCGCGGTTCCTGCCTAATAA 3556130 29 100.0 32 ............................. GCTGCTTTGCTGTCTTACGGTGCCAGCATGGC 3556191 29 100.0 32 ............................. GATCCACCCGTCGTCGGTTGTCGGGAGCGGTT 3556252 29 100.0 32 ............................. AAAGAGGAATAACCTTCGCTATTTTTAAAGGT 3556313 29 96.6 32 ............................T CATTCAGGTCATCCCACAGCTCGCACATTTTC 3556374 29 100.0 32 ............................. GCAATTGGGCGATCATTTGGGCCTTATTCATG 3556435 29 100.0 33 ............................. CCAGTATTCAAGGGCAGGCAGGCCGCCCGCCGC 3556497 29 100.0 32 ............................. GTGAAGGATGAGGTATGCAATACGGTTAAATC 3556558 29 100.0 32 ............................. GCGGCAGCAGTATGACAGTTACGGAGTATTAA 3556619 29 100.0 32 ............................. CATATAGCGTCCCCACCACCAAACACATGTTT 3556680 29 100.0 32 ............................. CCGCGCCCAGACCGTTGATCGCTACCGGGTGT 3556741 29 100.0 32 ............................. GTTCGACACCCGACCTGTAATGGCTGTAATAG 3556802 29 100.0 32 ............................. TACATCCGCCGGGCAGCAGTGCTTGACCCTGC 3556863 29 93.1 32 ...........T....T............ CCTCGCATCACGGTTCCGGATCTCGGGCTGAA 3556924 29 100.0 32 ............................. ATAATTTAGTTTTTGGCAAATGGCGAACAACC 3556985 29 100.0 32 ............................. CGTGTCAGCAATGACTACCTGATCGGGTGTTT 3557046 29 100.0 32 ............................. CAGTACATCTCCACGCTTTCACAGGTTACCGA 3557107 29 100.0 32 ............................. AGTTATGCGATACCGGCGTCAACATGGGGCCG 3557168 29 100.0 32 ............................. GAGTGGGGGGATATTCGCCAGCGACTGTCTTC 3557229 29 96.6 32 ..................A.......... GAAAATCGAGGATGGTTCATCCACTTTGCGAC 3557290 29 100.0 32 ............................. GCTGACACTCAGCGAGCAGAACAAGATTTAGC 3557351 29 100.0 32 ............................. CTTGGTGGCAGTGGTTCTCATACTAACAACTG 3557412 29 100.0 32 ............................. CAGATCAACGGAACTGCTGCCGACAAACCGAA 3557473 29 100.0 32 ............................. GTAGTCGACTCTGCAACAGGGAGAATGGTTAA 3557534 29 100.0 33 ............................. GGCCCCGATAATCATCAGGCCATCATCCCCTCC 3557596 29 96.6 32 .............T............... TGCATCACCAACGTAAACAGGCCACTTAACAG 3557657 29 96.6 32 .............T............... GATGTCTTCAGGTTCAATGCCGCGATAACTGC 3557718 29 96.6 32 .............T............... TGTGGCTGTATTGTCGAAATCGACCGGGAACC 3557779 29 93.1 32 G............T............... AACGCATAGGAATCAGCAAAAGGAGTCTTGCA 3557840 29 93.1 32 G............T............... GGCACATCGGGTAAACAAACGTTTTCTGGTAT 3557901 29 82.8 0 G........C.AT.C.............. | ========== ====== ====== ====== ============================= ================================= ================== 34 29 98.4 32 ATGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTTCTTGCTGCAGGCGAAATTCTGCCTCCTCTGCCCCCTGAAGATGCACAACCTGTTGCGATCCCACTTCCCGTCTCTTTGGGAGATATCGGCCATCGGAGCAACTGATAATGAGCATGTTGGTTGTTGTGACAGAAAACGTACCTCCTCGTCTGCGGGGGCGGCTTGCCATCTGGTTGCTGGAGGTTCGTGCTGGAGTCTACGTTGGCGATACTTCAAAGCGGATCCGGGAAATGATTTGGCAACAGGTGATACAGCTCAGTGATGGCGGAAATGTCGTGATGGCTTGGGCGACGAATAGTGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAGAACCGCCGTATGCCGGTAGATTTGGATGGCTTGCGACTGGTTTCATTTCTTCCCATTGAAAATCAGTGAGTTGCATGTTCTTTAATAATATGAAATTGTTGGAATAAAGTTGGTAGATTGTTGTTGTCTTAAAAAATCATTATAAAACAGTAGCATATGTTTAGT # Right flank : GTCTGCAACCGAGTCTAAGGTAAAATCAGCACCGTATTCCCCGCTCTTACCGTTGCAACCCTACAAAATATATCTTTGCCAACAATTTCATTCTCTATTTAACTTATGTATCTAATAAAAATTCATATAGCCTATGAAAATTATTCGCTTAATGAATAATTAAATCTAATTAATAATATTAAACGGCATTGTAAAAAATGCTTGTTATTTTTATTTCTATCCATTTAATATGTCGAGGTTGCATTAATTACTGATTTACTAATTCTTGCTCGGTATTATATGCAATATGAATGGAATCTGGTTTGTTATTTATAATGGATGAGGGGAATCTCAGTGAAATAATATAAAGCTGTTATTTATCAGCAGGGTATGCTGGGTAGTCTGTTGTTTGGCGCATCTAAAGTTGATCCGGTAAAATTCTCTGAGTTCCTGAATAAGAATGCGAGAGAGGGCTGGCGCGTCGTGACCATGGAAAAGGATATCCGTCGCATGATGCTCTT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched ATGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //