Array 1 1105084-1107482 **** Predicted by CRISPRDetect 2.4 *** >NC_019680.1 Synechococcus sp. PCC 6312, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 1105084 36 100.0 37 .................................... CTCTTGCCGAAATGGTTGACTGGATTTGTGACAATCT 1105157 36 100.0 35 .................................... ATCAATACCCCAATCGGTGTTTCCACTTTATAGGA 1105228 36 100.0 35 .................................... AGGAACACGCCACCGATAGGTAACAAAATCAATTT 1105299 36 100.0 35 .................................... TGTGGCAGTGGTAGCCGCATTTCCATCGTCATCTT 1105370 36 100.0 35 .................................... TACCCACAAAGGTCTAGGGATTTTTTAATACTCTT 1105441 36 100.0 36 .................................... TTTACTAAATTCAGATGGGTGAATCATCTTTTTTGC 1105513 36 100.0 37 .................................... CAGTCTGGGGAAATAGTCTCTTTGTACGAAGCTCGAT 1105586 36 100.0 35 .................................... ATCAATACCCCAATCGGTGTTTCCACTTTATAGGA 1105657 36 100.0 35 .................................... TACCCACAAAGGTCTAGGGATTTTTTAATACTCTT 1105728 36 100.0 34 .................................... CCGGGAACTCAGTCACAGGATAGGGTAGCGGGAT 1105798 36 100.0 36 .................................... AGTCCACTCGCTCACTGACGATCAACTGATTGCCCA 1105870 36 100.0 34 .................................... TTTCTTGACTGCTAACGAATCACTGACTTTATAC 1105940 36 100.0 35 .................................... TACTAATTATGCTAATCCCATAACCAATCGAGGTA 1106011 36 100.0 36 .................................... GCTCAACGTGCCTATTTCAAAACGCGCCATCATTAT 1106083 36 100.0 36 .................................... GCTCAACGTGCCTATTTCAAAACGCGCCATCATTAT 1106155 36 100.0 35 .................................... AATAAGTGCCGGGGTATCTTGACTTCCCCAGAACT 1106226 36 100.0 36 .................................... TAGTAACCCAAATTAAAGAGCTAATAAAAGAATCTT 1106298 36 100.0 34 .................................... CCGGATAGCGGGGGAAATTTGGAAACTATTCACC 1106368 36 100.0 34 .................................... CAGGCCAGCATTACCCGAGCGCAAAACCGGATCA 1106438 36 100.0 36 .................................... CAAAATGTTAGTAACTCTATCAAAGTGCAACTTAAC 1106510 36 100.0 38 .................................... CGGCGGGTTGCCAGAATTGCTATGCCATCAACCAAGTA 1106584 36 100.0 37 .................................... AATAGATAACCTTCAGGAAAACTCCAATTTAATACTT 1106657 36 100.0 35 .................................... AAAAGGGTTTCCATTTTTGTTAACTGCGTACACTT 1106728 36 100.0 36 .................................... CCTCGATTTTCGAGTACGGTCGTATTGTTTTACTTT 1106800 36 100.0 36 .................................... AGTTAATCTCATCATTGAGCTTGTAGGGAATAAAGT 1106872 36 100.0 36 .................................... AATTAAGGAAGCAACTCTCAAATTCTCTGCCTGGAG 1106944 36 100.0 35 .................................... CAGCGACATCGGCAATAAACTTGAGTTATCAGAGA 1107015 36 100.0 36 .................................... CCTCGATTTTCGAGTACGGTCGTATTGTTTTACTTT 1107087 36 100.0 37 .................................... TCTGGGTTTGAGGGCAATAATGGCAATGATGGAAAAA 1107160 36 100.0 34 .................................... TGTTCATCCTGGCTAATCAAAGGCTCATGAGCAT 1107230 36 100.0 37 .................................... ACGGATGTCTTATGAAAAGCTGCTTTGGTTTATCTGG 1107303 36 100.0 36 .................................... GCTATCAATGGATTTGTGATTGAGTTAGCCAAAAAA 1107375 36 100.0 36 .................................... AATTTGGGAAGATGTCTCGTCAATTTCTACCCCAAT 1107447 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 34 36 100.0 36 GTGCTCAACGCCTTACGGCATCTAAGGTAGAGGAAC # Left flank : ATTATCTATTCCTACAGGGACGACTTATTTGTCTTTGGCAATGAGCGTCAAATGATTGTGGCTGCGGAGGAATTGACCGATCTTTATTGGAACAATACCGCTTCCTCGGCTAGCGTCTTTTATTACAACCCAGACATCAAGAGATATTATGGAGCGGCATATCCAAAGCTACAAGGTGAGTCCGAAAGCTGCAAGAGTAGGGACATCGTCAAGCTTGTTTGTGCAAATATTCTGGAGCAGGTCTTCTTTTTCCCCACCACTGACTCCGATGGGGACTATACAACCAGCCCGCTCACGCCCGAAACCGTCAACGGATGCAATGTCTGGATAGCTTTTCACTACAACTCTTCGCCTTGATTAATAATTTTTGCTTATATGTGGTCGCATAATTCTGGATCAAATCTGTCAGAGAGAATGATCCAAAAATCACTGATTTTTTGATCCAGAATTACGTGACTCGTTACAAAGAAAACCAGGCAAGCCGAGGCTCGGCAACAAAT # Right flank : CTATGTAAGCAGTCATTTAATTCTGGATCAGGGGGGTTTTAGTGAAATGGGGCGAAACGTGACGCGACTAAGTGAAATAGAGACTTGCAGGCATCGGCGGCCGGTTGCCTAGAAAACGAACTGATCACGGAATTCTGGATCAACACGAAAACAAGAGTATTTCTCTGAGAGAGGTTGATCCAGAATTAAATGATCACTTTTTGGGGGGTTGGTTTTGTGGCTCTGGGTTGCTCATGGGTGAACCTTTGAGGGGTGCTTTATTGTATTGGGGCGGCGCTAATCGCTTGTAAGAAGTAGGGTTGTTAGCCTTTCGATAGACGATTCATAGTCTTCTTGGGTGTATCCTTCAGTTGCGGCTTGTTGTGAGAGGAAGGTCTCTCGGGCAAAGGCTTCGATTTCCGATGCCGTGACGTTGGTCGCCAGGGTTTTGAGGAATTCAATGATCATGGGATGGAAGCCATAGTCTTCGGATGCGTTGAGCATATCCAAGACTTCGTAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCAACGCCTTACGGCATCTAAGGTAGAGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 1147365-1150200 **** Predicted by CRISPRDetect 2.4 *** >NC_019680.1 Synechococcus sp. PCC 6312, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================================== ================== 1147365 36 100.0 37 .................................... ACCCTGCCGTATCTTTAACTTCAAATATGTATTTAGT 1147438 36 100.0 34 .................................... TTTCCTTTTAATTTTACTTCGGTAAAACAAGAAA 1147508 36 100.0 35 .................................... TCCATTAACGAATTAGAAGCCGAACGCACAAAACT 1147579 36 100.0 36 .................................... TACCGCATCAGTTAACAGCATTTGCTTTGTAACTCT 1147651 36 100.0 38 .................................... TTGGGCTTGACATTACCTTGGCGGCCCAACAGATGGGA 1147725 36 100.0 36 .................................... GGAGTGAGACAAGTGAACAACCTAATAGATTGGAAT 1147797 36 100.0 35 .................................... ATTTTTCAATCTAATAGAGCTTTCTTTAACTTTTA 1147868 36 100.0 34 .................................... GTTCGATTATTTCTCCGTTAACTTCTTCTATCTG 1147938 36 100.0 36 .................................... GATCTATCCGTTGCCGTGAAATTAAGAACAGATTTT 1148010 36 100.0 37 .................................... TGGGTTTGGAGACAACAAGAGTCACGGGCAAAAAAAG 1148083 36 100.0 36 .................................... CCAAAGTAAAAATTAGGTCATTGGAAAGCATTGAAG 1148155 36 100.0 35 .................................... GTCAAAGTTGGCACTGATCGTCTCGCATCATTGGC 1148226 36 100.0 36 .................................... TCGAGATAGCTTGCAAGTTTTGGGTATCGTTTTCGA 1148298 36 100.0 35 .................................... CAACTCATGTCTCCGTACCCAGGCGATTTACAGCA 1148369 36 100.0 35 .................................... GCCCCAATCGCCGCAGTTCACCTTGTTCCGAATCG 1148440 36 100.0 35 .................................... TATATCTAAATTGTTTCTAATCTCGTTAATATCCT 1148511 36 100.0 35 .................................... TAAAGAAAGCTCTATTAGATTGAAAAATCTTTAAG 1148582 36 100.0 37 .................................... AGGGAATTTACTTTTAGTATATACAATTAACGAAGTA 1148655 36 100.0 39 .................................... CCCTAGCCTGATTACTGTGTGGCCTTGAGTATCTTGAGT 1148730 36 100.0 35 .................................... CCGGGGGCCACGGCGAACTGGAAAGTTTTTAAGAC 1148801 36 100.0 33 .................................... TTGAGTCTAAGTGGAAGTCTGAGTCTTGATTAC 1148870 36 100.0 33 .................................... TTGAGTCTAAGTGGAAGTCTGAGTCTTGATTAC 1148939 36 100.0 36 .................................... CGAGTATTCCGTGAACAGCCAGACGGATCGGTTGTG 1149011 36 100.0 34 .................................... TGGTCGGTGGTACTAATGTCCTGAAACCCGCGAT 1149081 36 100.0 36 .................................... CACTGATGGCGGGTGCGGGTATAGCAGGTGGAAGTG 1149153 36 100.0 35 .................................... CTTCTCACCGTCAAACATAATCCTGATGTTTGTTC 1149224 36 100.0 36 .................................... TTTAGACGAAATTTACGAACTCGGACAATCTCGCAC 1149296 36 100.0 34 .................................... CCGAATTAGTATGAGGGCAAATAACGGTATGCCC 1149366 36 100.0 33 .................................... TTGCTGTACCGTTCTAGGCCCATTAGGAGCCAT 1149435 36 100.0 35 .................................... TACAGCTTTCTGCCGCTCCAACCAGTATTGCCACT 1149506 36 100.0 35 .................................... TTGTATAGCCTGTACCACAACTTAACGGATGCCAA 1149577 36 100.0 35 .................................... CAAGTAGGCTTTACGCAGTTGTAAATCAAGCGTCT 1149648 36 100.0 37 .................................... CCAGATAGCTTTGCCCCCCAACCCATAGAAAATCAAG 1149721 36 100.0 38 .................................... TAGAACTGAACCGGCCTTAACCCTGACCCAATACAAAA 1149795 36 100.0 35 .................................... GTTATAGCGTTCCTCTCCCAATAGATTCTTAAGAG 1149866 36 100.0 36 .................................... TATCTACTTTAGGTTTGTACTCTTGTGATTTCCCGG 1149938 36 100.0 34 .................................... TAGAGACGAATCAGAAAGAAGAGTTGCTTATTTT 1150008 36 100.0 35 .................................... TCTACAAAACAAGTTAGATTGCTTAACCAAGAGAC 1150079 36 100.0 51 .................................... GGCACCTGCTGAAACGCTCTCCAGGCCAGGCCTGGATTGAAGTCTTGCAAG 1150166 35 72.2 0 ........TA.TA..........G...C.-.TA..T | ========== ====== ====== ====== ==================================== =================================================== ================== 40 36 99.3 36 GTGCTCAACGCCTTACGGCATCTAAGGTAGAGGAAC # Left flank : CGTAATGCGAGTGCCTCTGGATTTAGTGCAAAAATAAGGGCCGACAACGGAGGCACAATCATTATCACCAACGGCATACACCTAGAAGGGAATACGGCTGGAGCTAGTGGTTATTGCTTTTTCGCCTTTGGACAAGGACTGATCAGTGCGCTGAACCAGACTTTTACAATGATCAGTTCACCTAGTTTTGGAAACGTGTATTACTGCGGGGGACTTTCATTTATTGAATTGGGCGGGAGTACCATATCCGGAACTTACACCGGAACCCTTTACACGAAAGAGGGCGGCGGCACTATCCGAGGCCCCGCTTTTACTTATGTTTAGAAAGCGGCGTTCCACTACAACCCGTCCTGATTAATAATTTTTGCTTATATGTGATCATTTAATTCTGGATCAAATCTGTCAGAGAGAATGATCCAAAAATCAGTGATTTCTTGATCCAGAATTACGTGACTCGTTACAAACTATGTATTTGGCTATAGCAGCAACCGTAATTGCAT # Right flank : TAACCTATAGTCTATCTAAATTATAGCATGAAACGCTTTCTGGATAAGGGTTGTAGGTCATGCAAGTACCCTAGAAACTAACAACACACTCAAAACCGAGGACTCCAGAGGTTTTACGCCGCATTAGGGATTGCTCAAGCGTAAACAAGCTCTAATCCTTGCATGGGCTAAAAGATTTGATGGGCATCGCTAGGTTCAATCCAGGCCCCAGGCCGGTTACAACTACAAAGCCGTTCCCGACAGCGTTCACATAGGCCGACCAACAAAAGAGCATCTTCAGGTTCGAGTATCTGTTCGAGTTCCCAGCGAAGTTTCTCACAATTTCGTTGAGTTAATAAGCACCGAAAAATGGAAAACTGCAAGCTTTCACCGTAACCCTTGAGGAGTTTATAGGCTTTGCGCCAGCGTTTTGGGTCGCGAATGTCATAGCAAATGAGATACCAGCTTTGTTTTTCTGCCATGTCAGCGCACCACTAGTTTGGCAAATAAACCCGGCTCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCAACGCCTTACGGCATCTAAGGTAGAGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 2809537-2815131 **** Predicted by CRISPRDetect 2.4 *** >NC_019680.1 Synechococcus sp. PCC 6312, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2809537 36 100.0 39 .................................... AGTCTAAGGAGAAAGAATGAAGGTTTTAGTAAATATCTT 2809612 36 100.0 36 .................................... ATCTCTATGGGCATCTGAGTGGGGAGTCTATTTATG 2809684 36 100.0 36 .................................... ATACCGGAATTATCGCTGAGATGCTTGACAATTTGA 2809756 36 100.0 36 .................................... GTCAAAGGAATCGGTGCTCGGTTCGTAAGCAAGAAA 2809828 36 100.0 36 .................................... TTCTTCAGGTAAAAACTGAAGTGCTTCAAGTGCGTC 2809900 36 100.0 37 .................................... TTCAAGCGCAGCAAGACTGGCCTCGGAATTACCTGAT 2809973 36 100.0 37 .................................... CTAAAAAGCAGTTTGACCCCGCCGTGTTTTCTGTCCT 2810046 36 100.0 35 .................................... TTAGTGGATGGATTTACCAACTTATTATGCTTGTA 2810117 36 100.0 36 .................................... GGAAATCTGGCAGAATCGGGACGTTTTACAATCCTT 2810189 36 100.0 37 .................................... CGATGGAAAAATATGCTGCTACATACCTAGATTCAAT 2810262 36 100.0 37 .................................... TCAACCTTTTTTAGGAGACTGGCCGGAAATGATTGGT 2810335 36 100.0 39 .................................... CAGGTATAGTTACTATCTTTTCCCAAAACTTCTAGGGAA 2810410 36 100.0 36 .................................... GGTAGACAAACCCCGGACTCTGTAGGTGGGTTCTTA 2810482 36 100.0 35 .................................... CAGTTACAGGAGCCTTTACTACGCTATTGGGTACG 2810553 36 100.0 35 .................................... CAGAAATATTCACCTGAATACTTTTGGAATCCCAA 2810624 36 100.0 37 .................................... ATAGGGAGGGTACGTTAAACGGTTTTTATCCAAGTAG 2810697 36 100.0 36 .................................... CTATACCTGGTACAAGGTGAATGGGACTCTATTCAC 2810769 36 100.0 36 .................................... GTGGAAAGGCTAAACCCTTTACACAAGTGTATTCTG 2810841 36 100.0 35 .................................... AATACTTTTGGGCACTGGTAAATGCTGAGAAGCAT 2810912 36 100.0 35 .................................... TGTGTTGCAGGCAATGTCGGAGCTACCTTAAACAT 2810983 36 100.0 37 .................................... CCGAATCGTCTGTATCAATGGCCTACACCGGCCGATA 2811056 36 100.0 39 .................................... ATAAGCAATTGACGGGGTTAGGGTTCCGTCACTAAATAA 2811131 36 100.0 35 .................................... GGCCAGAGTCTTGCAAGATAGCTGGCTGGAGTTGG 2811202 36 100.0 39 .................................... GCAGGATGTTGCGGCCCGCCGACACTATCTTTATAACTG 2811277 36 100.0 36 .................................... TTGAAGTGACAACCAAGGATGAACGGAAACCATTCG 2811349 36 100.0 35 .................................... TCGACTTTACTGGCTTGCCATAATGCGGGTTTTCA 2811420 36 100.0 36 .................................... TAGATTTTAAAATTTCTAAAAATGTTTCATTGTCTC 2811492 36 100.0 37 .................................... TTGACTACATGAATGCCAATGCGCCGTCCAGAAGTTT 2811565 36 100.0 35 .................................... GTCAGAGAATGAGGACAAATTTAACGGGTGTAAAG 2811636 36 100.0 36 .................................... AACAAAACCGAAGTCATCTACAATAACGAATCTTAT 2811708 36 100.0 36 .................................... AGAGTATTACTGTGATCTAGTTGCGTACTACAACAA 2811780 36 100.0 35 .................................... TTGCAGGTGGAATCCAATGAGTCCGCGCAATCCAA 2811851 36 100.0 37 .................................... CGTTGAAGTATTTGCCGTGAGAGGGGGCGTTCATTAA 2811924 36 100.0 36 .................................... AGATGATGTTTATCGTTGCGAATCTGATATTCTAAA 2811996 36 100.0 35 .................................... CTAGAGTAGGTGACTGTATTGATTTATTTTATCGT 2812067 36 100.0 35 .................................... AAGAAACTTCGTTTTCAAAGCCTCTTCTCATTGCG 2812138 36 100.0 38 .................................... ATCAGAATCGTCTTACTTATGCGCCTTATATCGAATTT 2812212 36 100.0 35 .................................... TCATCCCCTCACACACCGTACACATAACGAAGGGA 2812283 36 100.0 37 .................................... CGAATTTACACTTGAAGAAATTGGAACGGATGGAAGT 2812356 36 100.0 38 .................................... CAAGAGAAAGTGGATAACCGCTTTAAGCAACTGCAAGA 2812430 36 100.0 34 .................................... GAAGTCATTTATAACAACGATTCTTATGTACTCA 2812500 36 100.0 35 .................................... TCGATTCTCAGATAGGCTATAGGCTTAATGCCTAA 2812571 36 100.0 35 .................................... TTTATTTGCCTAGCATGGTTGCTTTGTCTTTGATA 2812642 36 100.0 35 .................................... TTAACTATCCTTGGTGACAGTAAGGCACATTACAA 2812713 36 100.0 35 .................................... TTTATTAGGGTATGCATTTATGACTGTTATTTCTA 2812784 36 100.0 35 .................................... TAAATACTAGGCTATCCTTATTTTTTGTGTGTTCA 2812855 36 100.0 35 .................................... AGACGATCAGCAACCAGAACAACCCCCTATTTTGA 2812926 36 100.0 39 .................................... CAATAATCCCAATGGATCGGTTTTCCATCCTTTGTATGG 2813001 36 100.0 40 .................................... TAAAGTGTCGAACTCTCTTTTTGTTAGACCTTGATAACCT 2813077 36 100.0 36 .................................... AAGATGCAGTTGAATGTACTCTCTGACAGATACTAC 2813149 36 100.0 37 .................................... GCAATGACGAAGAGTACGTTCGAGTAAAAGAAGCAGT 2813222 36 100.0 36 .................................... CGTAGAGGAGCTAGTAAACGTAAATTAAAGGATTTT 2813294 36 100.0 37 .................................... ATAAAATTAATGCCTGATTCTCAACTGTTTCAGGTAG 2813367 36 100.0 35 .................................... AAATAACACATCCTGCGATGTCGTAGAAGATATTA 2813438 36 100.0 36 .................................... CATTCGGGAACGGGCAAACGCTGTTGGAACATTTAC 2813510 36 100.0 36 .................................... GTTACACTGCAATCAGTACCCACTTGCCACCCTAAG 2813582 36 100.0 38 .................................... TGGGTAACGGTGGGATTCCCTTTCTCAATCTCGTTCAG 2813656 36 100.0 36 .................................... TGGCAGCAAAACTCGCAGCTTCATCTGCCGATTTAC 2813728 36 100.0 35 .................................... CAAGCACCTAAAAATACTTACCCATTGAAAGTCGC 2813799 36 100.0 36 .................................... TTATAAGGAGAATGATTATAAATTCGTCTCTAGTAA 2813871 36 100.0 35 .................................... CTAACACGATTGAGGCTGAAGTTATCGTAGGCCGT 2813942 36 100.0 36 .................................... TTTCTACTATGATTCCCATGGCACTGGTTATTTTGT 2814014 36 100.0 36 .................................... TTGAATTTGATTTCCATTCTTCCATTAACAACACCT 2814086 36 100.0 36 .................................... AAATCTGTATGAAACCTTTGAAGCGGGCGATAGCGA 2814158 36 100.0 37 .................................... ACGAGATGGTTTAAGCCTTTCATACGCCTTCAACAGT 2814231 36 100.0 40 .................................... AGATACTCGCAGGGCTGCTAAAGCCCTTAAAAGAAACGCA 2814307 36 100.0 36 .................................... TTATATCCGTGTTCTGAAGTGTTTGTTTGGAGGTCA 2814379 36 100.0 35 .................................... TTAGATTCGCATCCGTCTTGTTGATATGAATAGAC 2814450 36 100.0 35 .................................... TTGACCTGGACTACTTTCCCTGTACCCTTCTGTAC 2814521 36 100.0 36 .................................... GCACTTACGTTGTACGAAGCATTGCGTACCTATAAA 2814593 36 100.0 35 .................................... AAGAAGCAGGAAATCCCCTTAGACATCAAGACGTA 2814664 36 100.0 35 .................................... AAAAACATCAATCTGTTTAATGCCATCGGTTCTAA 2814735 36 100.0 37 .................................... AACTGCAAGATCATTGTAAATCTCTTCCCGATATTGG 2814808 36 100.0 36 .................................... GCGTCAGTAAATCTAATAATCTTGCGTTGTTTTCGT 2814880 36 100.0 35 .................................... TCTTCGTCCTCACTGTTAAATCCCTTTTCTATTTT 2814951 36 100.0 37 .................................... TTCTAGTGAGTAATCGTCAGCGCAGTCTTTTAGTCTA 2815024 36 100.0 36 .................................... ATTAATCGAATTAACGGCGGATACGGCTGAGGTTAC 2815096 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 78 36 100.0 36 GTTTCCATTCAATTGTTTTCCCTAGCGAGTAGGGAG # Left flank : TTCTTGTTGTTCTGATTTGAACTTTATTGTGTTTGTTCTAGGGGAAAGCAATGGAGCGAACAGAGTGAGCGTGACCTGGGGGGCAAGGGGGGGCGGTTTTAGCACCCCCCCACGGCCGGTGACGGTGCGAGAACTTTGATTCCCACGTTTCCGGTTTCTGTCCGTCACCGGCCGAGAGCAAGTAGGCTTTGCTCGTTTCGTGTTTGACGCTAGGTGATCTGACTGAAGGGTACGACCGTTTGTCCCTAATTGCCGGGTGTCGTTAGATGTTGTTGTTGCATAGTCTAGAGGCTGGACAACAGGCCCATCAGTTCGATATCTAGTCTGGGTTAAGCATTATCTAAGGGGCAGGGGAGCGGATGTCTACACCCCTGTTTTCCATGCCTGTCATTCCATGCGCTTTTAGACTGGGGAATATAGGCAAGGGGAGGGATGAATGCAACGGGACTAGCAAGTAGGAAGGCTAAAAAGGCCGCCTACAGTGATTTTTACGAACAAAT # Right flank : GTCCTTCTATTAAAACCTATGTAGAGAGCAGTGTCTAGGTACAAGTTGCGAGGCAAAACTGGGGAGAATATTCTTGTTGCATAACATTGGTGTGAGATATGGTCGAAATCCTTGTCTGCATAGGGCATCGAGGCTGAGAACGAGAAGATGGAGTTTTCCATGATTGACAGCAAGCCTCGATAAATATCTTAGATAATCGTTGAAGTGGCCTGGTTAATAACTGGTGATCCCCCCCAAACTTCTATAGTTTCTAGTGTGTGTTTAGACAATGGATAAAACCTCAAATGATCTTCATTAACGTTAACTCTTTTGAGTAATCGTCTTTTGAGTTCGCAATATTTTTTATTACTTAAAATACATTCAAATACACTGTATTGGACTCTGGTTCCATAGCCCTCAAGTAAGTCAGATACTTTTTTGCGCCTCTTATTACACGGAATGTCATAGGCAATAATATAAAGCAACATTGGTCAATTAGCGAATTAGATAGGGTTGATATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTGTTTTCCCTAGCGAGTAGGGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.60,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //