Array 1 97773-93323 **** Predicted by CRISPRDetect 2.4 *** >NZ_PXKL01000010.1 Klebsiella pneumoniae strain CRE40 NODE_10_length_168146_cov_60.1297, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 97772 29 100.0 32 ............................. CGATGCCGGATCCCGAGTTTATCCCCGCCGGT 97711 29 100.0 32 ............................. ATATTAAAGGTTTTAATGCGATCTACCTTTAC 97650 29 100.0 32 ............................. ACGGATCAGTAGTTACTGACGGATCGCCCCCA 97589 29 100.0 32 ............................. CTGTGCGAGTTCGGCATGACACCGGCCAGCCG 97528 29 100.0 32 ............................. GAGGGGGCCGAGGGAGCAGTGATCAGCAACGT 97467 29 100.0 32 ............................. CCAAACACAGATTTTCGTAACGTTATCCGGGT 97406 29 100.0 32 ............................. TTTTTTTTCGATCCCCTCCCCACCACTAAACG 97345 29 100.0 32 ............................. CGCCGTTATCCAGAGCAAATGACTGAGTAACC 97284 29 100.0 32 ............................. GCCAGAGCGGTGAAGCGCCAGCGCCGCGCCCG 97223 29 100.0 32 ............................. TCGCTCACCCTGAGCCGCCAGACCGGCACGTG 97162 29 100.0 32 ............................. GGCCCCAAAGGCGAAGAGGCACCGGCCTACGG 97101 29 100.0 32 ............................. CAATGGTGATGGACTATGACCGATAGCAGCGT 97040 29 100.0 32 ............................. CAATATATGGTGTGCTGACGGGCTGTAAAAAT 96979 29 100.0 32 ............................. GATAATGACTGACAATATCTTACCCGCTACCG 96918 29 100.0 32 ............................. GTATTGATAACCTTTAGGATTTATAGAAATGG 96857 29 100.0 32 ............................. TGCTTCCAGCATTTCCGGTGCTGAGGCGATTA 96796 29 100.0 33 ............................. TGGTGCCGCTGAAATTAGCGCCGCTTACCAGGC 96734 29 100.0 32 ............................. CCCTGCGGTGCGCCAGTTCCCTTATTGGTGGC 96673 29 100.0 32 ............................. GCGCAACTTAAACTGTGGGTCTTCTCTGGACA 96612 29 100.0 32 ............................. ATCAACTGATTCGCTCAGCCTGGGAAGATGCA 96551 29 100.0 32 ............................. AATCTGGCACTCGCTTCCGGTGATATTCTCTA 96490 29 100.0 32 ............................. CAGAAAGTCACTTAGCATCGCCTTTCTCCTGT 96429 29 100.0 32 ............................. TCCTATCAGACCAGGATTAACCCGCCTTTCCT 96368 29 100.0 32 ............................. GAATTTCAGTCCAGAAATATTTATCCAGAGGA 96307 29 100.0 32 ............................. CTGGTGGAGCGCGCAGAACTGTATTCGACAAC 96246 29 100.0 32 ............................. GTGGCCTTTCATGACCGTTTCCGAGCATGGAC 96185 29 100.0 32 ............................. CACAGTCTGTTTTCCAGAATGTGCATGGTGCA 96124 29 100.0 32 ............................. TCATCCAGCAGGACAAAGCCAGAAAACTCTTC 96063 29 100.0 32 ............................. CAACTCCGCAGCGCCTGGGAGGGGTTTCGGAT 96002 29 100.0 32 ............................. CTGGTCCCTTTCTTGAATCCGCCGGATGCTGG 95941 29 100.0 1 ............................. G Deletion [95912] 95912 28 86.2 32 ...C.G.G-.................... TACACAAAAACGTTTTACAGTTGCGCAGCGCT A,G [95901,95908] 95850 29 100.0 32 ............................. TGCGCGGCAGAATCGTCGCCGTCCCGCCCGGT 95789 29 100.0 32 ............................. CAGGTCATGATGAAGACCTATCCGCTGGCCGA 95728 29 100.0 32 ............................. GGATTCACCTCGACCTGCTACGACGGACAGTA 95667 29 100.0 32 ............................. GCGACGGCGTGGATAGTCGGGATTTCACGCTA 95606 29 100.0 32 ............................. CCGGTTGACCGCACGGCGCCAGCGCGCCCCTT 95545 29 100.0 32 ............................. GCCGGCAATTTCTCGTTGAGGGCGCAGTTCAG 95484 29 100.0 32 ............................. TTGAACGATTCGGTTACCATCGCCTCCTGCGA 95423 29 100.0 32 ............................. ACACCCGAGATTTACCTGTCAGCCAGCGGCGG 95362 29 100.0 32 ............................. TAATGAATAGCAATTATCCATTTTTAGTAGGG 95301 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGTGGT 95240 29 100.0 32 ............................. CTGTCGGCCCGCCAGCGCTCAATAGGCGCTAC 95179 29 100.0 32 ............................. TGTTAGCTGAGTGTCGCCGGCACCGATATATT 95118 29 100.0 32 ............................. GGAAACCAGTTGCCGATATGCCCCGTAAACGC 95057 29 100.0 32 ............................. AACTCATGACGGGCAAGCGGGTCGCCACCGTT 94996 29 100.0 32 ............................. CGCTCTCTGGTATGTACTGCAACGTGCGATTC 94935 29 100.0 32 ............................. GTAAATAACGATTATGCACTAGAGGAGTTGTC 94874 29 100.0 32 ............................. TCATGCAGCAGATACAGAAAAAGGCTGGGCCG 94813 29 96.6 32 ............................A TATGCAGGCCGCAATTGCCTGTAGCTGCTGCC 94752 29 100.0 32 ............................. GGTGGAACCAATGTCGCCAAAGCAATCGGAGT 94691 29 100.0 32 ............................. AACTGTCCGACGTGGTCGCCGGTCGTGATATG 94630 29 100.0 32 ............................. GGGATAATCTCAGAGTGTAAGTCATTGTCACA 94569 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 94508 29 100.0 32 ............................. TTATTATATCTTCACGGTGAGGGAATGGTCCC 94447 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 94386 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 94325 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 94264 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 94203 29 100.0 32 ............................. TGCTAACCGGCACGTTTACCCGGACGAACACC 94142 29 100.0 32 ............................. CTGATCCCCTCCAACAACACGCCAGGCACAGC 94081 29 100.0 32 ............................. CGGTTAGCAATCCCGGGCACGCTATGGATACC 94020 29 100.0 32 ............................. CGGGGATCAAAAGTTGCCACACCGTCAAAATG 93959 29 100.0 32 ............................. GGGCTGAATGGCGAAAATATTGGCGATCTGTT 93898 29 100.0 32 ............................. TCGACGGTAACCCGTGGAGCAAACTGGAGCCG 93837 29 100.0 32 ............................. GAGGCACTGGGTGAATTATATGTTGAGATTGA 93776 29 100.0 32 ............................. CAGGAAAAGGCGATACAAAAGGCAGTGAGCGA 93715 29 100.0 32 ............................. TGCGGCATCGCTCTTCATGACTGGCGATATGT 93654 28 96.6 32 ........-.................... AGCTACTGGCCGCCAGCCACTGGATGACGTTG 93594 29 100.0 32 ............................. CCGTGAGCCGTGCTCCTCGGTCGCCATCCCCA 93533 29 100.0 34 ............................. CGAACCAATAAGCGCCCCTTGCCGAGTGACTCCC 93470 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 93409 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 93351 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================== ================== 74 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGACCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //