Array 1 1462520-1466870 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPSP01000001.1 Geobacillus sp. TFV-3 BJQ97_1, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 1462520 29 100.0 38 ............................. GAATAAACAAGTGGTGCTATCTTGTCCTCCAGATAATA 1462587 29 100.0 36 ............................. GATATGGATGGAACATTTGGATTGACTGATATGTTT 1462652 29 100.0 36 ............................. TTGTCTTGAATGTGGGTATGCAAGCGGGAATATGCG 1462717 29 100.0 35 ............................. CCCGATCCGGCAGGAGGAACCGCGTGTGGTTGGCT 1462781 29 100.0 35 ............................. TTATGTCACTGAATCCAAGCTGATTTTGCTGAATC 1462845 29 100.0 36 ............................. GGACTTATCGGACATTGCTACTTGGTGCCGTTTAAG 1462910 29 100.0 38 ............................. TATAATTGTGTAAAAAGATCAAGTCCGGGAATTTGTGT 1462977 29 100.0 38 ............................. AGTCTGGAAACGTTCGGCGAAACATGATTATGCGGCAA 1463044 29 100.0 37 ............................. TCCAAGAGGGTCAAGGGGTGCTGGTACAGCACGAAGC 1463110 29 100.0 38 ............................. TACATCGCCTTTCCGTCATAGCATCTTAAAATTTGAGG 1463177 29 100.0 35 ............................. GTTAAAATAGCGATAGCACGGCTGGCTTCATCGAC 1463241 29 100.0 34 ............................. GTCGAGGCGTTCAACTTGACCAGACCAATACCAG 1463304 29 100.0 36 ............................. CTCTCCGTCTGCAAGGGAATAATGCGTGGGAACATG 1463369 29 100.0 35 ............................. AGAGCTGTTCAACCATTCCAGCCCTCACATTACGC 1463433 29 100.0 36 ............................. CGTCTTTGGTTTGTTGATAAAAATGATAACCAAACG 1463498 29 100.0 34 ............................. GCGAATCGGTGACCGGAATTAAACTCCGCTCATC 1463561 29 100.0 38 ............................. TATATGGTGACATATATGGAAAAACCTCGTGAACCCTA 1463628 29 100.0 38 ............................. AAACGGGCAAGTGCTTACTGACAGTCTAACGGTTGCGG 1463695 29 100.0 39 ............................. TCGCTTTAAAAATTGAAGTGTACCGTGAGGAGGTGGCTT 1463763 29 100.0 35 ............................. TTGCTTTGATTTGTAGAAACTCAATGGCTATCACT 1463827 29 100.0 37 ............................. CTGTCGTGAGCTTCCGCTTCCCGATCCGGTATCCCTT 1463893 29 100.0 36 ............................. TCGCATTGGCGACCTCGAGTGAAATGACATCATCGC 1463958 29 100.0 35 ............................. CGCAACATACCCGATTTCCTTCAACAGCAACAATC 1464022 29 100.0 37 ............................. TGATTTGATCCAAGAGCATATTTTCCGCTTGTTCCAG 1464088 29 100.0 36 ............................. CGATCGTGATGAACATTCTGCCCATTGCCGTTGTGG 1464153 29 100.0 39 ............................. CTTTCATCGCCCTCCCAGTTTTGTTGTCGTGTGAAACAG 1464221 29 100.0 39 ............................. CTTTCATCGCCCTCCCAGTTTTGTTGTCGTGTGAAACAG 1464289 29 100.0 38 ............................. AAAGGTGGCTTTTGTAATGGTTAATGTATCAGTAGAGC 1464356 29 100.0 38 ............................. AAAGGGGAACGAGGGAACTCGGAAAACCCTAGAGCCAC 1464423 29 100.0 35 ............................. CCATTTCTACGAACAAAACTTCGGTCCTATGAGTC 1464487 29 100.0 35 ............................. GTGAAATGCTTGCAAGTCGGGCATACAGCTGGATT 1464551 29 100.0 35 ............................. GTGAAATGCTTGCAAGTCGGGCATACAGCTGGATT 1464615 29 100.0 38 ............................. TTCATAATCAACGTTACGAATTGCGATGCTTTCCGTTG 1464682 29 100.0 35 ............................. CGCTGCTGTCGTTGGATAAAACGGAATAGATACGC 1464746 29 100.0 34 ............................. TTGTACCTGGCAAAGTGATTGTGATTGTCGTTGA 1464809 29 100.0 36 ............................. TTCGGCGAGTGCATCAGTCTGTGAATTGAAGTGAAC 1464874 29 100.0 38 ............................. ATCCGAGCGATTTCAGACAGCACACTTTGGCAATAGGA 1464941 29 100.0 36 ............................. ACGATTGGTAAAATAAAGGTAAAGGAGGGCCGAAAA 1465006 29 100.0 38 ............................. AGGCTTTCATCGATTGGCTGCTAGAAAAAAAGTATATA 1465073 29 100.0 35 ............................. ACGATTGGTAAAATAAAGGTAAAGGAGGGCCGAAA 1465137 29 100.0 36 ............................. AGAACAGCACAAGGCTTCTTCGGTCTGCTCGGCATA 1465202 29 100.0 36 ............................. ATGCCGTCATAGTCGTTGATAAGTTTCATGTCGTTC 1465267 29 100.0 36 ............................. TGTTTCTCCGCATATACTAGTCCGACGAGCAACACG 1465332 29 100.0 38 ............................. TACAATCAACATTGCAACAGCGTCTTGTTTGACCGATT 1465399 29 100.0 35 ............................. TTAATAATTTTTCTTCCGACTCTGTCCACTTTCGT 1465463 29 100.0 34 ............................. TGAGTTTTCTTTGCCTCTCCCGGTTGGGACTTAT 1465526 29 100.0 40 ............................. AAACTTAAAGCCGCGCCATTCTTGACAGAGCTCACCTAAC 1465595 29 100.0 36 ............................. GGAAATAAAGCCGTTCGTAAATTAGACGGAAATAAA 1465660 29 100.0 37 ............................. ATATTCAGATTTTCGATGGGGCCGGTCAAACGATTTC 1465726 29 100.0 37 ............................. CTGGAAAGCGCCAATAATGTCCTGTTGAGGTTATTTC 1465792 29 100.0 37 ............................. GTGATCGCCCTTTCCGGACAGGTAAAGATCATAAATA 1465858 29 100.0 35 ............................. GAAAAAGTGTCGTAAAAAGACACGGAGGTGTACAA 1465922 29 100.0 37 ............................. GTGGCTGTACGGGGCTGATAGACGACTTCACGAACGA 1465988 29 100.0 37 ............................. TGATTTGGAAGAAATTTTACAGTATTTGGAAGAGATT 1466054 29 100.0 35 ............................. ACGAAAGAAAGGGGCGATTTTAGGTGACAGAAAAC 1466118 29 100.0 36 ............................. AGGCGACATGAAGCTGGCTGCTGAATTGTACGAATG 1466183 29 100.0 38 ............................. TAAAAATGAGCAGGTCGGATGAGCGTGAGATAATCAAT 1466250 29 100.0 37 ............................. CTGCAGGGAACCGTTCTATTGCGAAGGACCGATGGTG 1466316 29 100.0 37 ............................. CTGCAGGGAACCGTTCTATTGCGAAGGACCGATGGTG 1466382 29 100.0 38 ............................. CCGGCAATGTCGGTCAAGGATTTCTGACACTTGCATGC 1466449 29 100.0 36 ............................. TGGCGAAAGTATCGGCGGGGGGAGAAGCAATCTCCC 1466514 29 100.0 36 ............................. TATAGCGTTCCTTCAAAAATTTCTCGGCTGCTGACG 1466579 29 100.0 37 ............................. ATGAAGGCGGAACATATAAAATCGAGAAGGAAGGAAT 1466645 29 100.0 37 ............................. TATCATAAGATTGTCAAAATCAATTTTGGAGATTGGC 1466711 29 100.0 35 ............................. ATCGGTGGATTGAAGAGTACCGACGTTGTCGTCGT 1466775 29 100.0 38 ............................. TACGAATGGTTTGTGGAGCATTGCGAACTGGTGAAATC 1466842 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 67 29 100.0 36 GTTTTATCTGAACGGAGAGGGATTTAAAG # Left flank : TGATGAAATATATAAACCATTGAAGGCATGGTGGTGAAACATGTTTGTCATCATTACGTATGATGTTGCTGAAAAACGAGTCAACAAAGTTTGTAAAAAGTTAAAGGAATACCTCACTTGGACGCAAAATAGTGTATTTGAAGGGGAAATTTCGAAAAGTTTGCTGATGAAGTGCATGTATGAATTGGAGATGATTATTGATAAAGAAGAAGACTCCATTTACTTGTATGAAGTAGGAAATCCCAAGAATATAAAAAAGCGGGTATTTGGTCAGGAAAAGAATTTTGATGAGTTGTTCCTTTAAGTTTAAGAATTTGCAGTGAACCGCATTTTAGCGGACAAATGGGAAAAAGCTTGATTTATCAAGGGCAGTGCTTCATTATTTGCGTAACATTAAAAACACGATTACCACTTTACTGCAAAATACGGTATAATTGATGCGTAGGCATTAGCGTAAATTGCTTGCTACATCAATAAATATTATTTTGTAACTGATAGGG # Right flank : GAGTCAATCATGAGCGTCAAGATGTTTTTTGCAAGCAAAAAATGCAGAGAAGTGCAAGAAAAAATACATAGGCTTGCCAGCTCAAGACTTAAGGTTCCAGACCGGGGGAAGAGGACGGCTGGATCGCGGAGAGAGCGTTCCGCAGTCGATAGCTCTCTCCCGTAAAGGCCAGGATGTGGGCATGGTGAACCAAGCGATCCACCAGCGCAGCTGTCAAGCGGTTGTCCCCAAACACCCGATTCCACTGTCCAAATTCCAGATTCGACGTCACGATGACGCTTTTTCGCTCATAACAGTCGGCGATAATATGAAACAACAGCTCCGATCCTTGCTTTTGAAACGGCACATAGCCGAGTTCATCCAATATCAACAGTTCGCACGCATCGATGCTTCGTTTCAGCCGCCCGAGCGTGCCATTTTTCAATGCCTCTTCCAGCTGGGCGACGAGATCCGCGACGCGGAAAAACCGAACCTCATGGCCTTGTTGGCACGCCTGGATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGGAGAGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 1992320-1992934 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPSP01000001.1 Geobacillus sp. TFV-3 BJQ97_1, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1992320 29 100.0 35 ............................. TTTATGCCGTCTCTAAGTCAAAAAAATTCAGCAGA 1992384 29 100.0 37 ............................. GTAGTGATTGTGTCGAACAAGGTGTTAGCATCTCGTG 1992450 29 100.0 37 ............................. GATATGATTTGGTTTGATCCCAAATGCCGCGGCAATT 1992516 29 100.0 39 ............................. CCGGGGGATGGAGCCATCAGCACTCCCACGCTTGACGAC 1992584 29 100.0 35 ............................. TCGTCACAGCTAACCTCCCCTTTTCTGTTTTTTGA 1992648 29 100.0 34 ............................. AGCTTCCGCCAGGCGTTTGCGCCACTCTCGCAGC 1992711 29 100.0 37 ............................. GCTGATTCGTTTTGCTTGTGTCGTCATGTTCATCATT 1992777 29 100.0 36 ............................. GGTTCAAATTCACGAGGAATGCCGAACGCCAGCCCT 1992842 29 100.0 35 ............................. GTGAATCGATACAAACGCACGCATATCATTGCTCC 1992906 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 10 29 100.0 36 CTTTAAATCCCTCTCCGTTCAGATAAAAC # Left flank : CTTCTTTCCGGTAAATCTGAATCAAGCAAGCGCTGATGACGTTGTGAATGCCAGCCTCGTACAGACGGTCGAGGTGACGGGCCAACGCATCGTCATTCAACCAGGAAGGATGGAGCCCGGAACGGATGAGTTTCTCCAGATCGATCCCCTGAGCCCATCGTTCCAGGTGAACGAGGGCTTGCCGGCCGTCAAACATATTGTAGAGGATGGCCTGAACGGCATCGCTGGTTCGAGTCTGGCACTGTGGATCAACGGGAACGAGATGGTCAATCAATGGGGGAAGGCCCAGTTCCTTGACTAGAGCACTTATGATATTCAAATAAGAATTGCGATAGACCGCTTTGACTTGCACATCCATGAGAGAAAAACTCCTTTACGTTCCTTGTGTGTCAAGGATTCATTCGACGATGGGCGCAAAAAATCCTCCCGATTTTCGTTGAGAGGGTGCGAAATGTGAGTAAAACATCAGTTCTGTAATGGTATCTTAATTGGTTAAAACT # Right flank : CCTCAATATCCTGCATCTTGACGTGTTTAGTGCAAAATAAAAATACAGAGTTCTGCAACGAAACGTGCAGAGCCTAAGGCAAAGAAAAAAGGCTTGCCAGCCCCTAACATTTCCTCTACTGTGGAAGTTGTGAACACATAAACCAAACAGTGGAGGAGCGAAAGGATGCTGGCAATGCCCGAAATGAATCGTATCAGAAAACTGCGTGAAAAGAAAGGGTTATCGATTGCGGAAATTTCCCGCGAAACGGGATATAACTGGAGAACGGTCAAGAAATACGCGGATGGCGGCATTTCTGTCCAACCAACCATCAAACGCAAAAAGGGGATGATGGAGGAAGAAGGATACGGGCAAATCATTGATGACTGGTTGGAGGAGGATGCCAAGCTGCCGAGAAAACAACGGCGAACGAACAAGACGATGTTTGAAGCGCTTTGTCGTGACCATGGATTTCAAGGCTCGTATCGCACCGTTTGCGCGTACGTGCAAAAACGAAGACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAAATCCCTCTCCGTTCAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 3 3160442-3158668 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPSP01000001.1 Geobacillus sp. TFV-3 BJQ97_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3160441 30 100.0 36 .............................. GCCATTTCTTAGAAAGGGCTAAGAATATTATCTTCA 3160375 30 100.0 38 .............................. CGAACAAGAACATGCTGTACACGGAATTCCAATAAATC 3160307 30 100.0 38 .............................. AAAAAAAATCAAAAAAATATGTTGACAGCAAAAAAGCG 3160239 30 100.0 36 .............................. TTTAACACCAAACAATAAGGGGAAGTTTAAGAAGGA 3160173 30 100.0 37 .............................. ATAACCAACTCCGTATCTTTGCAAACAGGGCACTCAT 3160106 30 100.0 40 .............................. CCCGTTTTCCCCTAAAATGGATGTTTCTCCCCTGTAACCG 3160036 30 100.0 37 .............................. GCCCAATGTCCATGACATCTGCGTTAATTCGCAAACA 3159969 30 100.0 38 .............................. ACCGTTTCTGATTCTACGGAAAGAATCTTCATATTAAA 3159901 30 100.0 36 .............................. TCTTATGATGGGGTTTCGGCGGAGTCAACCCCGATC 3159835 30 100.0 37 .............................. TTGGGCGACACCGGGAAGAACTTATTGAATTGCACCA 3159768 30 100.0 34 .............................. CATTAGAACCGTCACTGACGAATACGTCGTACTT 3159704 30 100.0 36 .............................. GATGACCTACGAGATAAACGACATAGAAATTACAAG 3159638 30 100.0 36 .............................. CTTTGTCAGTTCTTTTTGGCATGCATTACAAGCTAA 3159572 30 100.0 39 .............................. ACGCGGACGCGGGGGAATCCTGTCTCTATCGCTCGGACA 3159503 30 100.0 38 .............................. TGCGCCCACTTCCTCCCCTGCCTGCCGCTGGGATGATT 3159435 30 100.0 36 .............................. ATTTGACTAGGATTCGGTCATCCGCTTTTTTATCCG 3159369 30 100.0 37 .............................. AAGTTTCACATAATCATCCTATTACGCTGTTTTATAA 3159302 30 100.0 37 .............................. CGTCCACTGCGGGCGAGAAATCACGCATCCGCAGAGC 3159235 30 96.7 38 ............G................. TAGTCGCGAGCGTCAAGATCTCCATATTCTTCATAAAG 3159167 30 100.0 37 .............................. TGATAGACTTGCAAGCGGTTGAGATACTGCGACGAGC 3159100 30 100.0 36 .............................. CTACAAAGCGTTTTGTAGTGTAGTATAGTAGCAATT 3159034 30 100.0 36 .............................. TAGGTAAAACACTGCGTCGATGACATTGTAGATCCC 3158968 30 100.0 39 .............................. ATGCTATGTCTTGCTTGAATGGATGTCTTTTCAATCGGA 3158899 30 100.0 40 .............................. TTTCAAAACTGAAGAAATGGAAGAGCCGATTGGTTTTGAA 3158829 30 100.0 37 .............................. TAGCGAACCGGACGCGTGCCTGTTTCGAGGCGAGCCG 3158762 30 100.0 35 .............................. CCATCCGAGAAGTAGAGATATCTACCGTCTTCGTA 3158697 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 27 30 99.9 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GGCCGTCTTGCAATTTGATCTTTACCGCTACAAGACGCTCATGAAAACGCCGATTGTGGTGGATGGGCGGAACTGTTATGAACCGAAGGCAGCCCAAGCCGCCGGCTTGATCTATGAGTCGATCGGGCGGCCAGCCGGCTTGGGTGTGCGAGCGGAGGGTGGGGTTGTTAATGTTCAGCGGCAGCCGTATCGGTGAGGAATCGGCCGTGATTTGCTTCATCCTTTATCGGAGACTAGCGTTGTGAAAAGAATTGTAAGCAAGGCTGTTACATGGCATCGATGGACATGGACAATCCGGGCCAAGATACAGAGGATAAGCGATTCATCCATAATGTCGTCGACCCCCAATCGTGCTAAAATCCCGGGGGATCGACGACAATTATTTGATGCGCTTGAACCTTACAGCCATCGAGGAAAAAAGGAATTGACAGAATTTTTGGGACGTGATATTCTAAAAACAGCCCAAGCTCAGAAAGCTTGATATAACAAGCTTTTTTGGG # Right flank : CTGCTTATGCAACTTGGTGGATCCGTCAAGCTATCACTCGTGCCATTGCGGACCAAGCAAGAACGATTCGAATTCCAGTACATATGATTGAGACACTTGGGAAAATGAATCGAGTGCAATTGGTGTAAATTATCACTTTATTTCGGCACAAAAGAGCCATTTTTTGCACATTCCTTCAGAAAGCCCTCTCCCCTTTTCTGAAAGAATGTTCTAAATTTTTTTGTGAATTATTTCGGAAGAGAAAATCCATCGGTTCAGAGGAGGGGAGGAGGGCGTGATTCAATTTCATGACTTTGGCATTGACGTCCAAACGTATGCAGAGCGTGGAAAAGAAAACGACTTCCCTCTTCTGACACAGTGTCCGCATTGCCGGGCCACGCGCCCGTTGCACCGCCACGGTTACTATGAGCGAAACGCATTGACCCTACATGGTGATGATCGCATTTGGATTGTCCGGTACCGCTGTCGGGAATGTTTGAAGACGGTGAGTGTGCTGCCTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //