Array 1 54554-53536 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACSKA010000005.1 Exiguobacterium sp. s37 scaffold4, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	===============================	====================================	==================
     54553	    31	 100.0	    35	...............................	TTCACTGTCAAATGCTCGTCTTTTTGCATTTCAGA 	
     54487	    31	 100.0	    35	...............................	AAAAAGTTTATCATGCGTATGAATTACCGTTACGA 	
     54421	    31	 100.0	    35	...............................	ATGGCGGCCTTGCGAATATCCCGTACCGTCATCCA 	
     54355	    31	 100.0	    33	...............................	AATAAACGAAACCTTTACGCCTCTTGCCGGGTA   	
     54291	    31	 100.0	    36	...............................	TACTTAATCACGGGGTGTGGGAGACGTCTCCTAGTA	
     54224	    31	 100.0	    36	...............................	ACCGCGTGTTCGCCGCTTTGATTAGTGGCGGACGCA	
     54157	    31	 100.0	    35	...............................	CTCCGACAATGTAACCTCGCCAGTGTCCGTTGTCA 	
     54091	    31	 100.0	    35	...............................	CTATCTTCTCGTCCTTCTCGTCTTAAATCACGTTA 	
     54025	    31	 100.0	    35	...............................	TCTAAGTACGTCAGCGACTTCCATCGTCGTGACCA 	
     53959	    31	 100.0	    35	...............................	CAGTTGGCTGAGAGCCTAGCGAATCGAAATACCAA 	
     53893	    31	 100.0	    34	...............................	GCTTTCGCCTTCGTCGTCGTACGCTTACGAGTCG  	
     53828	    31	 100.0	    33	...............................	AACGTGCGTGTCAGCTACTCGGACGATGGCGGC   	
     53764	    31	  80.6	    36	GT.AT.GC.......................	TTGGGTGACTATCGTATGCAGGTGACGGAGGACGCA	
     53697	    31	 100.0	    35	...............................	TTTGAGTGGATCGAGTTGTCCCTGTGACGGGCCAA 	
     53631	    31	  96.8	    34	............T..................	TACGTATACTTGCGCATTGTCTTCGCCTATACGA  	
     53566	    31	  90.3	     0	............T.......C.........A	|                                   	
==========	======	======	======	===============================	====================================	==================
        16	    31	  98.0	    35	TCGCACCTCGTGCAGGTGCGTGGATTGAAAT	                                    	       

# Left flank :   ATCTTTCTTGTATAAGTGAGGGATGAAAAATGCTTGTTTTAGTAACCTATGATGTCAATACAACTTCACCTGGTGGGACGAGACGTCTTCGTCAAGTGGCCAAGGTATGCCAACAGTATGGGCAACGCGTGCAAAATAGTGTATTTGAATGTATAGTCGATCAAACCGAATTTACATCATTGAAATTACGGCTAAAAGAAATTGTAGACATTGAACGAGATAGTCTTCGGTTTTATCGATTAGGAAATCATCATGCTTCTAAAGTTGAGCATGTGGGCGTAAAAGAATCTTTAGATTTGGAAGGTCCTCTCATTTTTTAAAATTCGGGATGATTTCGATTCGTGCGAAGCTAAAGTGAACATGATTTTCTAGAGGGGTTCGCACCTAATTTATTCTGTAGAGTTAATTGATTTTGTAGTATTTTTAGAAGATAACGCCCTTTAAAGGATAATATTTCCTTTAAAATTGTTTTAGTCGATTGATTTGTCTAAAATCGGCTA
# Right flank :  GTCATAATTGGTATCATTAGCATTGCCATTCTTGGGTAATAAAATCATTTATAAGCAATGGGCGAACCTCACTGAAGGTTCGCCCATTGCTTATAAATTGTCTTAAATTAAACTAGTTTGCTTGTTTCAACTCTTCAACAGTTTCTACATTGTCATCGAACTTCCGTACATCCACGCGTTTCACGAAAAATGCTAAAACGAGCGCCAAGAGGTTCATCCCGAGTGCAACGTAAAATGAATATTGAATCCCAGATAAGAGGGCTTGCTGAGTGATGGCACCCATCGAGCTCTCAGTGAGTGTCGCAGGATCAATTCCGGTCATCAATGATTCAGCTTCCGTGCGTGTCACCGAGTTCATGATAGTGACGAGGACTGCTGTACCGATTGCACCAGATACTTGTTGAACCGTGTTGTTGATAGCTGTTCCGTGCGGATTGAGGCGAGTCGGCAACTGGTTGAGACCATTAGTTACAATCGGCATCATAACCATTGACATCCCG

# Questionable array : NO	 Score: 9.16
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCGCACCTCGTGCAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [8,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-3.50,-4.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [12-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.78   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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