Array 1 19270-15078 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPQN01000046.1 Geodermatophilus sp. DF01_2 NODE_46_length_35977_cov_180.614895, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================== ================== 19269 28 96.4 33 ...........................A AGGACGCCGGCACGCAGCAGATCGTGTTCAAGT 19208 28 96.4 33 ..........................G. CTCCCCGGCCAGCTGGAGGTTCTCCTTCCAGGT 19147 28 96.4 33 ...........................T GGATCCGGTCCGGGGGCATCCTCGACCTGCTGT 19086 28 96.4 33 ..........................G. TGGCCGCGCTGTCGGCCGAGGCCGGCTTCGAGT 19025 28 96.4 33 ...........................G CCTCGTGGAACGCCCGGTGCTCGGCGCGGACGT 18964 28 96.4 33 ...........................G CGTCGCGTCCTCCTTGGACAGCGGGTGCGCCGT 18903 28 100.0 33 ............................ CCGCGAGCTGACGACGACCGCGCAAGAGCGCGC 18842 28 100.0 33 ............................ CCGCTGCAGGATGCGCAGCACCTGCGAGCGGGC 18781 28 100.0 33 ............................ CGGCTCGGGTTCGCCGCGTTTCCTCGAGGTGAG 18720 28 100.0 33 ............................ CGGGCTCACCGCGCCGAGTGCGTCCTTCGCGGC 18659 28 100.0 33 ............................ CTGCCCGGCCACGTGCTCCGGGGTCAACCGGGC 18598 28 100.0 33 ............................ CCAGCTGAAGAAGTGCCACAGCAGCCAGCCACT 18537 28 100.0 33 ............................ CCGGGCGTGATGGCGGCATCACAGCCTGCGACG 18476 28 100.0 33 ............................ CAAGGCCAACTTCGGCAAGCTCGCCTACCGGTT 18415 28 100.0 33 ............................ CGGGCGCTGCCGGCCGCGGGCTTCGTAGGCGTC 18354 28 100.0 33 ............................ CATGTCGTCGTCCTCCTGGTCGAGCATGGGTAG 18293 28 100.0 33 ............................ GGCGGCCGCGGCCGGCCAGAACAGCAGCCCGCT 18232 28 100.0 33 ............................ GGCCGCGCCTCATGCCGGGTGCCTGCGGTGACC 18171 28 100.0 34 ............................ CGACTGCGCGGAAAACATGCCGGCGTCCTCGACC 18109 28 100.0 33 ............................ CAAGTTCAGCCGCAGCGCCTCCGTCGGCAGCTC 18048 28 100.0 33 ............................ CTGCTGGTGCGGCGGGCTGCAGCTGGGCCAGTC 17987 28 100.0 33 ............................ CACCCCGACGGACCCGCCCGGGGGGACGTCGGC 17926 28 100.0 34 ............................ ACGGAAGTCGGCGACCGGTGACGGGTGTCAGGTG 17864 28 100.0 33 ............................ GCGCTGACCGACGCCGCCACCTGGCTGCGGTCG 17803 28 100.0 33 ............................ CTGCCCCACCTGCGCACGGGCGCTGGCCGCCGA 17742 28 100.0 33 ............................ CTCGTGCATGCCCTGCGAGCCGCTCAGCTCCGC 17681 28 100.0 33 ............................ GTTTTTCCCGACAGGGGTTGACGTGACGCTGAC 17620 28 100.0 33 ............................ CATCCACTTCGTCATGTCGCAGGACCCGGCCGT 17559 28 100.0 33 ............................ CAGCTCCGGGGGCACCGCCATCGTCGGGCACCA 17498 28 100.0 33 ............................ CAGGGACCGGGCAGACCACTTCGGTGGCGGCGG 17437 28 100.0 33 ............................ CCGCTGATCAGTGCGGAGGCTCTGGCGGAAAAA 17376 28 100.0 33 ............................ GGTGGGCGGCGCGTCGAAGGGGATGGCGTCAAC 17315 28 100.0 33 ............................ CTGCCCGCTGTGCGTCCTCCGTGCGGAGGAGCA 17254 28 100.0 33 ............................ CGGTGCTGCCGGTGCCGTCCGCGTAGGAGGACG 17193 28 100.0 33 ............................ GCTGTTGCCGCGACCACCGGGGACGCCCTGCAG 17132 28 96.4 33 ...........................T GCCGGAGTGCTGCTGTGACCCGCCGTCCGGACG 17071 28 100.0 33 ............................ GCGCGCCGACTGGCGTCGCGCGCAGTTGGACAA 17010 28 100.0 33 ............................ CACGGGTCGGCCGAGGCGGTCGTGATACAGCCG 16949 28 100.0 33 ............................ CACGGGTCGGCCGAGGCGGTCGTGATACAGCCG 16888 28 100.0 33 ............................ GGCCGGGCCGGTCTGCCCGAACCACAGGTGCTC 16827 28 100.0 33 ............................ GGCCTACACGCCGCGCACCTGGGACGGGCAGAT 16766 28 100.0 33 ............................ GCAGCAGGACCGGACCGCCGGCGTGCCGACCCC 16705 28 96.4 33 ....................C....... GCGGTCCCACTGCGGGTTCGACAGGTTCGCCAG 16644 28 100.0 33 ............................ CAGGGACCGGGCAGACCACCTCGGTGGCGGCGG 16583 28 100.0 33 ............................ CCGCGACGCGGCCAACATCCGCTGGTCGGGCAC 16522 28 100.0 34 ............................ CGCCCGGTACGTCGAGCTCGACCGCACGGACACG 16460 28 100.0 33 ............................ CCGGGCGTCGCCCTCGGCGAGCGTCTTCTCGAA 16399 28 100.0 33 ............................ GTCCGCGATGTCGCCGCGGGCGATGCCCAGCTG 16338 28 100.0 34 ............................ ACCGGTGGTCACCGACCGGTAGGCCCGCAGGTCG 16276 28 100.0 33 ............................ GGCGCCCAGCGCTGTCCCGGCCAGGAACAGCGC 16215 28 100.0 33 ............................ CCTGGCCGGCGCCGGCCACGCCGTTGGGCTCGG 16154 28 100.0 33 ............................ GCCCTTGAAGTCCTGCGGTGCCACGGTCGTCGG 16093 28 100.0 33 ............................ GTCCGCGTGGTCGGCGTGGCCGCGGGCGACGGC 16032 28 100.0 33 ............................ CGCTCCGTGGCTGGCCGAACAGCTGCGGCTGGC 15971 28 100.0 33 ............................ TCCGCCACGGGCCGATCACGACCGCCGGCGCGC 15910 28 100.0 33 ............................ CACCGCCCCGCCGCCGAGGGCGGCTGCACCCGC 15849 28 100.0 33 ............................ CCAGCCGCGGATCATGTCGTCGGTCACCGCCAG 15788 28 100.0 33 ............................ CATGACCGCCGAAGCGGTCGGTGCGGTCGTCGG 15727 28 100.0 33 ............................ CGCCGGGTCGTCGACGGCGGTCAGGGCGTAAGT 15666 28 100.0 33 ............................ GCTGGCCCCGGCCAGCGGGTGGTCGAGGCGGGC 15605 28 100.0 33 ............................ CCCGCCGATGCTGCGGGCGGCGCTCCGGCTGGC 15544 28 100.0 33 ............................ CCAGTGGCGTCGCGAGGTAGTCGACCATCCGGT 15483 28 100.0 33 ............................ CCCCGGGGGGCGCGGCGCGTCGGGCGCACCGGC 15422 28 96.4 33 ...G........................ CGGATCGACTCTGCGCCAGCGGAGGAGGGTGCG 15361 28 100.0 33 ............................ CACCTGACCGACACCGCCGATCACCCCGCCCAG 15300 27 92.9 33 ................T....-...... GTCGCCGACCGTGCCGCCCCACAGGGAGGAGAG 15240 27 89.3 35 ........-............T.A.... CACCCCCGTGGGCTTTACCTTGGCGAGCTTCGCGC 15178 28 78.6 43 .......T....C...........CCTA CGGGCGGGGCGTCACGCTCCAGTCAGACCCCCTAGCGGCGGAT C,A [15151,15153] 15105 28 71.4 0 ..CG....AT....T......A..CC.. | ========== ====== ====== ====== ============================ =========================================== ================== 69 28 98.5 33 GTGCTCCCCGCGTCCGCGGGGGTGAGCC # Left flank : GTCGTGTACCTGTGGGACGAGTCGGACGATCCCGTGGCCGGCGGCTCTGGGTACGGGACGGACTTCTGATGGTCGTCCTCGTCTTGTCGGCCTGTCCCGCGGGGCTACGAGGACATCTGACGCGGTGGCTGCTCGAGATCTCGGCGGGGGTCTTCGTCGGCCACGTGTCCGCCCGGGTGCGTGACCTCATGTGGCTGAACGTCTGCGAGATGGCGTCGGGTGGCCGAGCGCTGATGGTCTTCAGCGTGCCGGGGGAGCAGCGGATGGACTTCCGCGTGCACAACCACCACTGGACGCCGACGGACTTCGATGGGCTCACGCTGATGATGAGGCCGGAGCACGCCGCGGCTCCCGCGGTGACGGAGGAGCCGCCTGCAGCGGGGTGGAGTGCTGCCAGCAAGCGCCGCAAGTACGGGCGTCGACCAGTCCGATAGCGTCCTCAGCGAGAAACCGAACGCAGAATCAGCACTTCGGGACCGAATGGGCAGGTCAGGAAGTGT # Right flank : TTGCAGGTTCGCCGTCGCAAAGCCGAGAAATTGCGCGAACTGCGCAGTCTTCTCAGCTCACCGCTTGATCTGCGCAGGTTGGTGCTGTCACGATTCCCGGGAGCTCCCGACGGCGGGAGCGCCCCGGACGGCGGGGAGACCGTGGAGGTTCCGCGTGGACGTGCAACTCCTTCTGGCACTGGTCCTGGGCATCGCGACGATCGTCGTGCTGGTCCTGTGGACCCGCCTCGACGCCTTCGTGGCACTGTTGATTGCCGCGCTGGTCACCGGCCTGCTCGCCGGGCTGCCGATCGGTGAGACGATCGCCTCGATCACGACCGGGTTCGGGAACACCCTGGGCTCGATCGGCATCGTGATCGGTCTGGGCGTGGCAATCGGCAAGATGCTCGAGGTCTCCGGCGCGGCCGAGCGGCTGGCGCGCGCGTTCGTCAAGGCGCTCGGCCGGGGCCGCGAGCACTGGGCCATGGCCGGCACCGGCGCGGTGGTCTCGATTCCGGTCT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTCCGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTCAGCGGGGATGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //