Array 1 6255-6452 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RJFZ01000015.1 Helicobacter pylori strain ZH53 15, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence            	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	===========================	=================================	==================
      6255	    27	 100.0	    27	...........................	AGTGTCGTTATCAAAGTTGGCGTTGCC      	
      6309	    27	  92.6	    30	..............CA...........	AGCGCTGTTATTAAAAGCAGATTGAGTGCT   	
      6366	    27	 100.0	    33	...........................	GTTACTATTATCAAAGCTTGAACTTGCGCTGTT	
      6426	    27	  92.6	     0	.C......G..................	|                                	
==========	======	======	======	===========================	=================================	==================
         4	    27	  96.3	    30	ATTAAAGTTATAAGTCCCTTGATTGAA	                                 	       

# Left flank :   TCTAAACCTTGAGCGTCTTTAGCGATAGTAGTATTTTTGCTTTGGGTGTAGTTTGTATCATTGCTTGCGATCGTGTTGTCGCTAGTAACATTATTCAAAGCGTTTTGGGAATGAGCTACATCCTCTTGATAGGTTTGTTGGGCTTGTTGTTGTAAATCGTCTCCTAAAAATTGGGTAATAATGGATTGGTTGTTAAAGGTTTCTTGTAAGGTTTCATCTTGCCCGTTAATGTCAAAGGTTACATCATAAGTGTTATTACCCACTCCAACATGGCTAATGGCTTTATCGCCCTTATAGTTGATTAAATCCCACAAATAGCTTTGATAAACCCCATACTGAATGGTCCCGTTTGTGGTGAGGATGTCATAGGTTTGATTGCTATTAAGGGTTTGATTGAGGTTAAAAACCGCACCAGAACCAAAAGACACGCTGCCTTTAAGGCTAGCAAAAGGCGAACTTGAGTTTAAAGTGTTAGCGCCTGAAAAACTCACCTTGCTGGT
# Right flank :  AGCTCGTTTGATTAAAGGAGATAGCGCTATTATTGTTACTACCGCTGAAACTAAAGCCCCCATTCGTGTCATCTGTAAAGCTAGAGCCACTGACCTTGATATTAGAGCCTTTAAAATTCATATAGGATTTTTGTGTCCCTGCATCGTTATTATCAAAACTCGCTTGATTGATAGTGATATTGTTAGCCGCATTAAAATTGAGCGTGGCCCCACCGCCATCAGAATAGGAGTTTCCGGTTGTTAAATGGCTAGAATTAAAATTAATCGTTTGAGCGTCATAAGTGCCTGTGATATAGCCGACATCACCTCCATTAATACCTGTACCTCCAAAGCGGATATTCCCCCCTATATCAAGCGTGCCACCATTGAATTTTTGCGTGAAACTAGCCCCACCAGCACTATAAGTGGTAAGAGTGTTTAAATAATAAGTCCCAGAGCCTTGAGCACTACTAAAAAGACAATAGGAGTTGTGCGTGGGCGAATTAGAACCGCTCTCAATA

# Questionable array : NO	 Score: 2.62
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.04, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTAAAGTTATAAGTCCCTTGATTGAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:74.07%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [2-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
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