Array 1 89842-89447 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHUV010000002.1 Klebsiella michiganensis strain SurvCare087 NODE_2_length_394128_cov_31.2792, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 89841 29 100.0 32 ............................. GCTATCAGCCTCGTTTTGTAATCCATGTTGCA 89780 29 100.0 32 ............................. AATCTTCTAAACGTGCTGGCTACGAACGTTTT 89719 29 100.0 32 ............................. TCGCGACAGATTGGGGCGACCTGGTATTTTGC 89658 29 100.0 32 ............................. TCTTCAGAGCGCACCCTTGCTGTTCAGGCTGC 89597 29 96.6 32 ............T................ CAATGGTAACAAGTGATCCGAGCGCAATCATC 89536 29 96.6 32 .............T............... GACTCACGAAACGCTTGGTTGATGTCTGAATG 89475 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGCATGCGCTGGTTAAAGCGAAAGTAGCCGTGACCGTTTTCCCGCCTTCCCCTGACGTTGCCTCTTTTAGCGGAATAACGGCGTTATTTCCCTTTATTCAACAGCCAACCCCATTACAGCAAAAAGCGCTTGAGCTGGATATTGATAAACAAGGTCCGCAATTATTTATTCTTGAAGATGTGACTGGTGCTGGAAAAACAGAGGCTGCGCTTATTTTGACACATCGCCTGATGGCTACGGGAAAGGCGCAGGGGCTCTATTTTGGTCTGCCGACGATGGCGACGGCGAATGCCATGTTCGATCGTATGTCGGAGAGCTGGCTGGCGTTGTATCAACCCAGTTCACGGCCAAGCCTGGTGCTGGCGCATAGCGCACGTGGATTAATGGATCGCTTCAATCAGTCTTTGTGGTCGGGAGATTTATCGGGTTCAGAAGAACCCGATGAGCTCCAGCCATCCAGCCAGGGATGCGCCGCCTGGTTTGCCGACAGTAATAAAAAA # Right flank : CCCGGAGGAAACGTGGCAACAGTTCAATACACGTGTTCCCCGCGCCGCCATCCTTATTATCCTGTACTTTATTTTTTCCAGCATTCTTTAGTGTGGCAAAGTCCGCTTCCAGGTAATACTTGCCAAATTTTGGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACCGATGTTTTACCGATGCTGGGTTCCGAGCCCAAATCCAACCCGTCCTGCCAGACGCGCTGCCAGATATAAACCTGGCTGTCGGCGATGGATCGCGTGCTGGCAGCCAGTAGCAACAATGGTATTAAAAAATGAAAACGCATCATGGCGACAGGCCTTGTTGCCGGATTTTATCGTTAGTCTATTTTGAGGCGGGTCTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATACGCCCCGGCAGCGCTTTATCAATATACTGTAGGTTATCCAGCTGTACGTCATGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 72148-73496 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHUV010000014.1 Klebsiella michiganensis strain SurvCare087 NODE_14_length_176771_cov_26.7187, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 72148 28 100.0 32 ............................ TATAACTCGGCCACAGGTCGGCTTATCCTGAA 72208 28 100.0 32 ............................ ATCAGGCAAAACATTTCCTGCATGTTCGCGAT 72268 28 100.0 32 ............................ TGATCCGCAGATTGTACCGGCGTCGACCACAG 72328 28 100.0 32 ............................ AGACCGATTTTATCAGCCAGGGGGATGATCAC 72388 28 100.0 32 ............................ ATGTACTGTGCCAGCAGCTGAATGCGGAAGGG 72448 28 100.0 32 ............................ GCAGTGTCGCGTTCCAGAAACAGCCTGATTTT 72508 28 100.0 32 ............................ AATATAAATTGCCTGAATTTCTTGCGCGTACT 72568 28 96.4 32 ......................C..... ATTTGCCGAAAATGCTGCCGCAGTTGTATTTG 72628 28 100.0 32 ............................ AGTATCCTAAAGAACCGTTGCGGCGGCGGTTG 72688 28 100.0 33 ............................ TCTACGTACAGCAGAGTAAAGCATGAAGTCAGA 72749 28 100.0 32 ............................ TTCAGGGATATTCGCGATGTCCGCCTGAGCAG 72809 28 100.0 32 ............................ TTACAGGTGACATCGCACACCCCTGATACCTC 72869 28 100.0 32 ............................ TGTGGCAGCCGAACAAAAACGGCGACGGGATT 72929 28 100.0 32 ............................ AGTGCAGCAAACCAGAGAAGGGCGCGCCGGCT 72989 28 100.0 32 ............................ AGAAGAAAAGGCAGACCCGATCAACGAAGAGA 73049 28 100.0 32 ............................ GTATTCGGTCCAGTGCCTGATGGCGCGGATGC 73109 28 100.0 32 ............................ CGCCGCGAAACTGGGCCACGCCTTCAGCTGCT 73169 28 100.0 32 ............................ ACCAACAAACTGCAGGCAGAGCAGAAAGCCGC 73229 28 96.4 32 ............G............... AAACTTCGCGCGGATTTCAGCGATTTTGTTTA 73289 28 96.4 32 ............G............... CGCTACTCCGCAAAAATGAAATTCGTGTGCTG 73349 28 100.0 32 ............................ ATGTTGCGGAGAATCCACAGCCTGTTCTCAGT 73409 28 100.0 32 ............................ TGCACGAAATCAACGTTGCCCGCTCGGTTGCC 73469 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 23 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTTATCCATCAGGTGGTGGATAAATTTATCGTCGAGCTGCAGGTTCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTCAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGCTACGACCGGGCCATGGGCGCGCGTCCAATGGCGCGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCCAATGAGCTGCTGTTTGGCTCACTGGTTGACGGCGGACAGGTGACCGTTGAACTGGATAAAGAGAAAAATGCGCTGACCTACGACTTCCAGAGTGCGCAGAAGCACAAACCGGAAGCTGCGCATTAAGTTTCGGTACTCAGTGACAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCTATGTCCTGGACCCTTTTTTATTCCACTTTTTAACTTGTTGATTTTAATAAAGAGAAAATATAGCGTAAAATTATGGTGGCAGAGAGGATGTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTTGTTCGTTCA # Right flank : AAGAGCTTGCCCACACTGCTGTGCAAGCCAAACGAGTCTAAAGAAATTGCCAAAGTAATAGGTTATTTTGCAAGTTGCGATGAATGTCACCGTATTGCATCTAATATACTGTTTTTATAAACAGCTATCGACTTTGAGCCACAGGATGTGACTATGCCCGCGAAGTATATTGCCCCCTCGGATTTAAAAACGATACTCCATTCAAAACGCGCCAACATTTACTATCTGGAAAAGTGTCGTGTGCAGGTTAATGGGGGGAGAGTGGAGTATGTTACCAGTGAGGGGCATGAGTAATTCTACTGGAATATCCCAATAGCAAATACAACGGCCATTATGCTAGGAATGGGAACCTCTGTTAGCCAGGCAGCGATGCGTGAGTTCGCCCGCGCGGGTGTGATGGTAGGTTTTTGTGGTACGGATGGCACACCTTTATATGCCGCCAATGAAGTCGATATCGACGTTTCCTGGCTATCGCCACAAAGTGAATATCGACCAACGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //