Array 1 28877-29576 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QVFC01000007.1 Faecalibacterium prausnitzii strain AM33-14AC AM33-14AC.Scaf7, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
     28877	    28	 100.0	    33	............................	CCGGAGAGCACGCCTGCCCAGACTACTGGGGCG 	
     28938	    28	 100.0	    34	............................	TTGATGAAAATGACTGGCTTGAAGTTCAGAAAAC	
     29000	    28	 100.0	    33	............................	CATTCACGAGTATCACGCCATGATGGCAACTGC 	
     29061	    28	 100.0	    33	............................	CAGGACAAGCCCCCGCAAGAAGCCCATCCGCAA 	
     29122	    28	  96.4	    33	............A...............	CTTCTGGCACGTTTACCCGGACGGCCACCGCTG 	
     29183	    28	 100.0	    33	............................	CCTTGCTCCAGTGCGCCGGATCAGGAAACCATC 	
     29244	    28	  96.4	    33	..............T.............	CTGGCAAATCTTCCCGACTTATATTCGTGGACT 	
     29305	    28	  92.9	    33	..........T...T.............	CATGGGCAGCACCAGCTATCTGGTTATGACCGA 	
     29366	    28	  96.4	    33	..............T.............	GGACGATGCCTACTATGAGAAGCTGGCTATGGA 	
     29427	    28	  96.4	    33	............T...............	TTTGCAGCCCGCAGGTGCAGCGGAATTTCACGG 	
     29488	    28	 100.0	    33	............................	GAAGTTGCCCACACCCATGGACGGTTCCAGAAT 	
     29549	    28	  71.4	     0	...........ATGT........TCA.A	|                                 	
==========	======	======	======	============================	==================================	==================
        12	    28	  95.8	    33	CTTTTCCCCGCCCACGCGGGGGTGATCC	                                  	       

# Left flank :   TGTACCTGCTCCTGCTCAGTGAGGAACGGCCGGATCTGACCGCCCTGTGTGCGCAGTTCGGCACCGGTGCGCCCCCGGAGACCCGGCCCTATGACCCGCTGCTGGAACGGGTGACAGCGGGCAGCTGCTGGCAGTTCCGCCTGACTGCCAACCCTACCCGCAGCAAAAAAGACACTGCCGACCATACGGCCCGAGGAACCCTGAAACCCTGCTATCTCGAGGTAGAGCAGGAGGAATGGCTGTGGGCACAGGCCGCAAAGCACGGCTTTGTCGTCTCGGAGGGGTCGTTCGCAGTGACCCGGAAGCAGACCTATCACTTCAAGAAAAACGGCACCCGGCCCGTTACCCTGCTGGCTGTGACCTACGAGGGCATTCTGCAGGTGACGGACCCGGAGGCCTTCAAGGCCCTGCTGTGCGAGGGCGTTGGCCGGGGCAAGGCCTATGGCCTTGGCCTGATGACCATCATCCACAGGGGAGGAGACCATGGCTGAGATGCCGGG
# Right flank :  ATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAAATGCAGAGCGAGGGAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCGCATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGTTACGGCACCGATCCCTATTGCGCCAGCGCGCGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGCACCCAGAGCAACGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCTGCATCCACCGGCCATGTGGCCGCTCACGAGGCCGGTGCCATCGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACTGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATATGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCACC

# Questionable array : NO	 Score: 5.93
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTTCCCCGCCCACGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.60,-13.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,1.01   Confidence: MEDIUM] 

# Array family : I-C [Matched known repeat from this family],   
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