Array 1 19522-17107 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCIK010000008.1 Flavonifractor plautii strain DFI.2.29 NEIHMJGO_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 19521 33 100.0 34 ................................. AGTTTGGCTGCGCCAACAGCGCCAACCCAAGTCG 19454 33 100.0 37 ................................. TCGCCGTCCAATGCAAGGGACAGATAGGATTTCAGCC 19384 33 100.0 34 ................................. CGCTTGCCCACCAGCTCGGAGAGCGCGTCCTCAC 19317 33 100.0 36 ................................. TTCGATATCTGCCTTCATAAAGCGAGCCATCTCAAG 19248 33 100.0 34 ................................. TCATATGAGCGGCCTACAGAGCCGGATTGCACGG 19181 33 100.0 37 ................................. CCTGGCGATCTCCGTTGAAGGGGAGGCCCTGGGCAGC 19111 33 100.0 35 ................................. AAGATTCCCTCCAGTAAAGGTGACCGCCTGGCTTA 19043 33 100.0 35 ................................. TTGTCCACAAGGCCGCGCAGCTTGGCGCGCATCTG 18975 33 100.0 36 ................................. ACCGTGGCCACCAAGAAACGCCAGGCCCGGCTGGCC 18906 33 100.0 36 ................................. GCCTGGTCTCTCGCGCTCACTATCATCATCCTCCTT 18837 33 100.0 34 ................................. AATCTGGAATGTCCCATATTTATTGATACGAAAT 18770 33 100.0 36 ................................. GGCTAGTAGCGGAGGACCGGCGTGCATCTGCGGGGA 18701 33 100.0 37 ................................. GGTTATGTCAAGATTATCCGTTGACCAATGGCAAATG 18631 33 100.0 36 ................................. GATTCCACCCCTTGAGCTTCCACAGGACAAGCAGGC 18562 33 100.0 34 ................................. AACGGCGTCCAGTCTCAGATGTGCAACATGGCCG 18495 33 100.0 37 ................................. AGCCCTGGCAATACGGTCACGGGGAAACAAAGGCAAC 18425 33 100.0 34 ................................. ATAGACGGCCCGGTCAGAGGCCAAGCGGAAGTCG 18358 33 100.0 35 ................................. CGCCCGCCTGGCCTGGAACACCCGCACGCCGATTC 18290 33 100.0 35 ................................. AGAGGTCTGAGCGTCCAGAGTGGCGGTCAGATAAC 18222 33 100.0 35 ................................. AGAGAAGGGGATTATGGCCGGCCGGGATGCCGATG 18154 33 100.0 34 ................................. CTTTGGGGTATCCCCAAATACACACCCGTTGTCC 18087 33 100.0 33 ................................. TTGCGTTGGCAATAAAAGCATCCATAATAAGCG 18021 33 100.0 37 ................................. GTTTGGCGTCATCTTGCGCCCTCCTCCCAATTTGCAC 17951 33 100.0 34 ................................. GGCCCCGTGCCGATTTTGAACCATGCGGCGGGGC 17884 33 100.0 34 ................................. TTCAGCGACGCCCATCCTGTGGGTGACGGCACCG 17817 33 100.0 36 ................................. GTAAGGAGGCCCTGCTCCTGCTCAATGATGACATTG 17748 33 100.0 37 ................................. CCGGAGGAGGGCGAGGACGGCAAGATCTATGTGGCCG 17678 33 100.0 34 ................................. TAGAGCTTTGCTTTATGAACCTCGTACCGGGCTA 17611 33 100.0 34 ................................. TCCAGGATGGCGCTCTGGCCCTCTGCGAGCAAAT 17544 33 100.0 37 ................................. AATGGCGTCCAGTCTCAGATGTGCAACATGGCCGCTC 17474 33 100.0 33 ................................. CGCCACCCCTCATTGGTGCAGACATACCGCCGC 17408 33 100.0 33 ................................. CCAAAGAGCGGTTTTTTGTCAAGACACCGAAAA 17342 33 100.0 33 ................................. TGGTCAACAGTGGGAGTCAGGAAGCCGCTGCGG 17276 33 100.0 38 ................................. AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 17205 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 17138 32 93.9 0 .................-.............C. | ========== ====== ====== ====== ================================= ====================================== ================== 36 33 99.7 35 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCGCCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGTAAGCTGGAGCCAGCCCAGTATAAACTCCTTCAGGCCAAGCTGTGCGCAATCATGGATCCCGAACGGGACAGCCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAACACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGAGGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTCATGGAGCATAGGCGCGTTTGTTTTCGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCTCTGCTCTTTGGTAAAGTTTGCT # Right flank : GTCTTACAGGGGCGCCTGGTCAGTTTGCAGGAGACGCCGCATAGGGGCGCGGGTCGATTCAAATTTTCACCCCGCGCCCCTGCTGTTTGCGTTTCTTTTCGTTGACTGGTATAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCATATTATGTGGATTTCAAGTGACTGGAAGGACTATGAGCTGCTGGACTGCGGCGGCGGCGAGCGTCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGTTACAAGGGGCTGACCCTCAACATCAAGCCTATGAACTTCAAGCACACCGGCGTCTTTCCGGAGCAGGCGGCCAACTGGGATTTCGCCATGGAGCGCATCCGT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //