Array 1 154698-162409 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSKA01000006.1 Halomonas humidisoli strain WN018 contig6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 154698 29 100.0 32 ............................. GGCATTGAAGAGCAGCTGATTGCTGGCGGGAA 154759 29 100.0 32 ............................. CGTCGCAATCTGGTTGGCTTCTTCCTGCCAGC 154820 29 100.0 32 ............................. TAACGGCTGAATCTCGTCGCGCCATTGCTGAA 154881 29 100.0 32 ............................. TGGTAGAGCAGTAGTTGCGGAGCTTTGCTATA 154942 29 100.0 32 ............................. CCAGTAATTGGCCCCTTCGTCGTAATCGGACG 155003 29 100.0 32 ............................. TTGCTGACCTCGCCAATGACGCGCAACAGTTC 155064 29 100.0 32 ............................. CTTGTAGGAATGCGCTAACGTTGCGATGTGCT 155125 29 100.0 32 ............................. TTCAAGGCCTGCAGGTGCAGGCGGCCAACATT 155186 29 100.0 32 ............................. AAAGATTAAAGGCGCTGACGATTACCTGGTTG 155247 29 100.0 32 ............................. CCGCGATGCCCGGCAACGTCAGCGACATGGTA 155308 29 100.0 32 ............................. ATGGGTGTTTGGATCAGCCCTTGGGAAAAACA 155369 29 100.0 32 ............................. CTGTTAGGCCAAATTCAGCACATCGAAGCGGG 155430 29 100.0 32 ............................. AATGCCGATTCTAGCGGTGGGTGTTGATACCG 155491 29 100.0 32 ............................. TGATTGAAGCGGCGCAAGACCTGGTGCGTAAA 155552 29 100.0 32 ............................. CCGTTGGCAGCTTGCAAGCCATCCGTTAGCGA 155613 29 100.0 32 ............................. CATGACGACCATGACACTGGAGAGGTCTACGC 155674 29 100.0 32 ............................. CTCGCATGCAGTCGTTTAGCCAAAATGTAGGC 155735 29 100.0 32 ............................. TGCGTAGGAGAGGTACCTCTCTTGGATATACT 155796 29 100.0 32 ............................. CCCGCCACCGCGCGGGCTTTTTAATACCTAAA 155857 29 100.0 32 ............................. CGTCCCATTAACGCCCATTACCGATCCTGAAA 155918 29 100.0 32 ............................. CGCTGCAGGCGCTGGGCATCCATCGCGGCGGC 155979 29 100.0 32 ............................. CCCATGCCCGGCATGACTCAAACATCCCACCG 156040 29 100.0 32 ............................. CTGCCTGAAATACCCATCGCCAAGCCGCCTAC 156101 29 100.0 32 ............................. GCAGCAGCCCCGCGCCCACGACCCCGGCACCG 156162 29 100.0 32 ............................. CGATTGCACGCGCGGTGGATCTAAGCGGTGAT 156223 29 100.0 32 ............................. GCACTGCTCATCGTGCTCCCCCCGCCCCCCGA 156284 29 100.0 32 ............................. TGGCCAGGGCGATTTTCTCGGAACGGTCGCCA 156345 29 100.0 32 ............................. TGGCATCCATGGCGGAAGCCCAGACGTTAAAA 156406 29 100.0 32 ............................. CCAACCGTTTTGGCGGTGGTTTTGTGGCTACC 156467 29 100.0 32 ............................. GCGATGATGTGCAAGTGTTTTGCGCCGACACA 156528 29 100.0 32 ............................. CTGAACTAGTTAAGTATCTGCGCAGTCTGGGC 156589 29 100.0 32 ............................. CGTCTGCCGTTTTGGTTAAACCGTGCTTGTTA 156650 29 100.0 32 ............................. TGGTTCAACAGTTTGGACGCGATAATTGTAGC 156711 29 100.0 32 ............................. CCCGTACAGGTCGCGACAATCCAGACCTTACG 156772 29 100.0 32 ............................. GAATGGTGGGATTCCAGACAGATAAAATAGCA 156833 29 100.0 32 ............................. CCAGGGCGACCGCCCGCCAAAAATCAGTAGAG 156894 29 100.0 32 ............................. GGAGCGAAGTTGGCCATACCTGGCGTTGTGGA 156955 29 100.0 32 ............................. TCGGTATTCCGCTTTGTGCAAATGCATCAAAA 157016 29 100.0 32 ............................. AACGCATCTGCATAGCGATCCGCTCGCATTTC 157077 29 100.0 32 ............................. GCCAAGAGATTCGTGTTGAGTACACGTCTATT 157138 29 100.0 32 ............................. CACGCCAGATAGTGCAAGAGGCTGGCTTGCCG 157199 29 100.0 32 ............................. CCTATCATCGATAGCCGGAGCAGCCTCTTGCC 157260 29 100.0 32 ............................. GTTACCTTCTTCAGCAGCGGCTGCATGAGGCT 157321 29 100.0 32 ............................. GTGAGGGGCTTGATTTTGGTGTTGGTTTTGGT 157382 29 100.0 32 ............................. ATCTGGATAATCAATCTGGTAAGAAGCAAAAG 157443 29 100.0 32 ............................. GTGTACCATTTTGTAAATCAAACTCAGTGTTA 157504 29 100.0 32 ............................. ATCCTCTGGACACCATTATGAACAGTATCACC 157565 29 100.0 32 ............................. CTAGGGCTTGACTCCTCGCTGGTGCAGCTACT 157626 29 100.0 32 ............................. ATGGGGAGTTAGTGCAATGAACACATGGCCAG 157687 29 100.0 32 ............................. TTTTTAAATAAAGTACTAGGAAAGGATCGTTA 157748 29 96.6 32 ............................A GCAACATCCATGCCTTGAGCTTGAATTGATTC 157809 29 100.0 32 ............................. CCTACGTTGATGCGGTGCGAAGCGGTCACGAT 157870 29 100.0 32 ............................. TATTCATCATAAATGCCGTTTTGCCCATGCTA 157931 29 100.0 32 ............................. TTCTCTATCGCCAAAGCGGCAACTTACTACCC 157992 29 100.0 32 ............................. CTACGCGCCTTCCATATTGACGGTGATGTAAC 158053 29 100.0 32 ............................. TTTATCTCGTCTGTAGTATTGCTAATGTCAAA 158114 29 100.0 32 ............................. CTATCAGTGCGAAATGATTGCGGCTGGCTATT 158175 29 100.0 32 ............................. CCAATCATCATCATAACTAAATCGATGGTCGT 158236 29 100.0 32 ............................. CGGCCAACCTGACAATTCAGGATCTACAACTG 158297 29 100.0 32 ............................. TCATCTTCTGCGCTTTGAGCAACTTGATATAG 158358 29 100.0 32 ............................. TCGATGTCTAGTTTTGGCGAGTTTATTGATGA 158419 29 100.0 32 ............................. ATTCAGCGACCTGGTGCGGAGGTAGCGCCGCA 158480 29 100.0 32 ............................. TTCTAATGAGCTTGATGACCTACAACATGAGG 158541 29 100.0 32 ............................. AGCAAGAGCGCCGTATTAGACGCAGAGCGTGC 158602 29 100.0 32 ............................. CCCTGAAACATGGCGAGTGGATGGTCTGACAG 158663 29 100.0 32 ............................. TCAGTGAAACGATCCTCGCGGGTGTGCCAGGC 158724 29 100.0 32 ............................. TCGATGACCCGCACACGCAGTACGTCAAAAAA 158785 29 100.0 32 ............................. TGGGCAACCAGCGCTTTAAAGAGTTCCGCGAC 158846 29 100.0 32 ............................. GCGCATTGTAGAGCAAAAAGAACGTAAAAAAA 158907 29 100.0 32 ............................. TTGCATTTCCTGTTGTCGCTACGAACGCCATT 158968 29 96.6 32 ............................A GTATAATTTAGTTCAATCCCTTTCTACTTATA 159029 29 100.0 32 ............................. CACACGGAAACGGAACGCACACAATGACGAAT 159090 29 100.0 32 ............................. TATCCCTTTCGCAGGAAGCCGCATGGTTGTCG 159151 29 100.0 32 ............................. TGCCGGTGCGCGCCTATTACGAAGGTGGCAGC 159212 29 100.0 32 ............................. ACATGGGCAACGAAACGAGAAAAAGAACCACG 159273 29 100.0 32 ............................. CGTTCGACGTTGATGATAGCTGGATTGACACT 159334 29 100.0 32 ............................. CGCTCCATATGCGCCGCCAGTGCTGCCTCGCG 159395 29 100.0 32 ............................. TGATCCGCGCCCGCTGGCGCACCAGCTTGGTA 159456 29 100.0 32 ............................. TTGTAAAAATTCCACTCCCGCCATCTATGTCT 159517 29 100.0 32 ............................. TACGCACCGAGGGTGGCTCGCTAAGGACGATC 159578 29 100.0 32 ............................. CCCTTGTCTGGCCCCAAGCAAGCACTGGAAGG 159639 29 100.0 33 ............................. CTTAGATAAAGCGCGTGCTGATGGCATCGCGAA 159701 29 100.0 32 ............................. TCAAGTCTCCTATCCCCAGCAGAAGAGTAATA 159762 29 100.0 32 ............................. TAAAGCAAGGGTCGCCAGTTGTCCGCACTATT 159823 29 100.0 32 ............................. ACACACCACTGAACGGGTAGGTGAGAACTGTC 159884 29 100.0 32 ............................. CGAATAAAGCGGGTTCATCCACCAGGAGAAGA 159945 29 100.0 32 ............................. CCGAAAAGAGCGTCTATCTGCTGTCCTCGCTG 160006 29 100.0 32 ............................. CGCATCACCATCTCAGACCTACAGCGGGCGTA 160067 29 100.0 32 ............................. CAGCGGTAACAGAGTCAATCCGTTGGCCTAGG 160128 29 100.0 32 ............................. CATAGCCATAGCCGTCAGACCTGTTGGCGGTT 160189 29 100.0 32 ............................. ATGCGCCACTTTGGCTCTGAGATCCACAAAAC 160250 29 100.0 32 ............................. CCTTCCTGTGGGATCAAATGGGGCAAGGAGAT 160311 29 100.0 32 ............................. CCATCAATGAGTATGAAAATTACGACGGATTT 160372 29 100.0 32 ............................. GCTTCCGTGCACGGTTTCTGGAGAACGGCCTG 160433 29 96.6 32 ............................A TCAGACCATGACGCCAGCGGGCCTTGCGCATA 160494 29 100.0 32 ............................. GCAAACCATCGTTGCGCATTAGCTAACATTAA 160555 29 100.0 32 ............................. ATCGGTGCTGGCAAGATGACGCACAAAGACAG 160616 29 100.0 32 ............................. CAGGGAAATAGTCCTGGCTGGGTTGGGTGGTG 160677 29 100.0 32 ............................. CTATCAAGCGTGGGAGCGCCAGCAGCGTTTGA 160738 29 100.0 32 ............................. CTACCACCCGAGCCAACGAGGACGAGGCATTA 160799 29 100.0 32 ............................. CCATGCGGCTCTCTACGGTGTTCGGTTGTGTG 160860 29 100.0 32 ............................. GCTGTTTGAGCTGCGTGGGCCGCCCAGGTGGC 160921 29 100.0 32 ............................. CTTTTGACCGCGGCTATCAGCTCGGTAGTTGG 160982 29 100.0 32 ............................. GAATTAACTTGGCGCGCTTTGACCGATACCGT 161043 29 100.0 32 ............................. GCCATTGATGCCAAGATCGACCCGACAGGCAA 161104 29 100.0 32 ............................. TGTAACTTTTGAGTCAAGTTACCATCCTGTAA 161165 29 100.0 32 ............................. GCTACGCCGCTGGCAAGGGGCCGCGCAACATT 161226 29 100.0 32 ............................. GCGGTGGAATCATCGTGGAGCTGTTTTTCATT 161287 29 100.0 32 ............................. TTGTCGGGCTGATTGGGGCAGTCAGAGCAGTA 161348 29 100.0 32 ............................. GTGGCTGACTTGCTGGGCGTTGCTGATATGGG 161409 29 100.0 32 ............................. CCCAGGTAGCGCACCAGACTCAGTAAGCGCGT 161470 29 100.0 32 ............................. GGCACCGAAGGCGTTGACGTTTGCTGGATTGA 161531 29 100.0 32 ............................. CGCGCACTCGAGTGAATAATGCTGGCGCAGTA 161592 29 100.0 32 ............................. TTGCGTGATGCCACATCAGCATCTGATGAACA 161653 29 100.0 32 ............................. CGCGCACTCGAGTGAATAATGCTGGCGCAGTA 161714 29 100.0 32 ............................. TTGCGTGATGCCACATCAGCATCTGATGAACA 161775 29 100.0 32 ............................. GTGTGCTGCCGTCAGTAGCTGCATGGAGTAGC 161836 29 100.0 32 ............................. ATGAAACCAGCGCAAAGCAATCAGCCACCCAA 161897 29 100.0 32 ............................. ATAAGAACGACCTAAGAAATTGTGACAAACAG 161958 29 100.0 32 ............................. CTGATTTAAGAGGGTTCACGGTGCCAACGTAA 162019 29 100.0 32 ............................. GGTAACTCAGTTACTATAATATTAACTCATCA 162080 29 100.0 32 ............................. CCTGTTTACCAAGACTTGCCACGCGATTTTGA 162141 29 100.0 32 ............................. AAACGGGTAGTGAGTTTCTATTCTACGGCATG 162202 29 96.6 24 .........................T... AGCGCCACTACCCAAGCTGATTGG CG,C,A [162225,162228,162233] Deletion [162259] 162259 29 89.7 32 .............CC..........G... TGTGGCGATCATGGTGTATATGCTAACCGTGG 162320 29 75.9 32 .....T.....G.CT...........GAT CCATTTGTTCAAACAGGTGCTGTTTCATCAGG 162381 29 86.2 0 ...........G.CT.............A | ========== ====== ====== ====== ============================= ================================= ================== 127 29 99.5 32 CCGATCCCCGCACAGGCGGGGATGAACCG # Left flank : GGCGATATTCAGCCACCTCCGCCAGCCCCCGATTCAGTGCCACCTGCTATTCCAGAGCCACCCTCGGTTGGTGATGCTGGGCACAGGAGTGGATAAATGGCGATGCTCGTAGTGATTACTGAAGCAGTGCCGCCACGTCTACGTGGCAGGTTAGCGGTATGGCTCTTGGAGATTAGAGCCGGTGTTTACGTTGGTGACGTTAGCAGGCGCATCCGCGAAATGATCTGGGAGCAGATAGAAGCGTTAGCTGAAGATGGCAACGTAGCAATGGCCTGGGCCAGCAACCATGAATCAGGCTTTGAATTTCAGACTTACGGCGAAAATCGCCGAGAACCCATCGATCATGACGGGTTACGTCTGGTGCGCTTTTTGCCGCCACAAGTTAACTAACTGATTTTATTTGATCTTTAATAATTTGATCTGGTTAAAATGTAAGCAAAATAGCTGGTAGATTTTTTATCTGCTATTTTCTTCTTTTAGATCAATTGTCTACAGCAAGT # Right flank : AGTTTCACGTCACGCTCCTGGGGCATTACGCCGCCGCCCCCCGCACAGTCAGCGCCATCAGCACGATGGTGCTTGAATTGTTAAATATGATGAGGAAGAGAATGTTCCAAAATAAAACTGCTTTAAGATAATGATTGCTGTGTGTTTCGGTAACTGCCATCTAGAGGATATTACGTCGTGGAAAACTTTCTTGAGCAATTTGGGGCTTATGTTCCTTTGATCATCAATGCCGTGAAAGCATTGTTGGTGTTGATTGTGGGCTGGGTTGTTGCAGGGGTAGTCAGCAGCTTAGTGCGTAATCGGGTGAACGCGATACCGCGTATAGACCCAACTCTGGGCAACTTCCTTGCAGCCTTGGTGAAGTGGGTCATTCTACTGGTTGTATTGATTACGGTACTCGGTCTGTTTGGTATTCAGGCTACCTCTCTGGTTGCTGTATTGGGGGCTGCCACGCTGGCTATTGGCCTGGCGTTACAGGGCACGCTCAGTGATTTAGCGGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCACAGGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGATCCCCGCACGGGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.60,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //