Array 1 6339-4577 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGML01000023.1 Paenibacillus macerans strain DSM 24746 sequence23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 6338 32 100.0 37 ................................ CTGCTTCGGATCATCCAGGCCTGTAGCGTCGGCTGAA 6269 32 100.0 34 ................................ TGTAAAAATCAGTGTCAAAATCTACGAAGTCAAC 6203 32 100.0 37 ................................ ACAAAGCCTCCTAGAGCGTCACAACACGTTAACCAAG 6134 32 100.0 34 ................................ ACAATGGACTTCCAGTTGAATAGTTGTTGCCCTT 6068 32 100.0 36 ................................ CATGTACAAAGTGCAACCCACATGGACAAGTGCAAA 6000 32 100.0 33 ................................ GATTAAGCCGATCGCTCAGCGCGCGTTTAATGG 5935 32 100.0 36 ................................ CATTGGTTTTTCCTCCTCAAATCCGCTATGGGTGGC 5867 32 100.0 33 ................................ TTTCAGCCGTTGTACATTTTTTTCAATTGTTGT 5802 32 100.0 37 ................................ TCGGTTGCGATCCCTAACATCGCAGACAAGGAATAAC 5733 32 100.0 33 ................................ TCGGCCAAGACAGCCGCAGGATTTCGTTTGGCC 5668 32 100.0 33 ................................ TAAAGTCTCGTCTAACAGCGAGGCTTTTTTATT 5603 32 100.0 37 ................................ GCCCCTCGCGGACCTACGACACGTAAAACGTGACATC 5534 32 100.0 33 ................................ ACTTTAAATCGGCGATCCACAGAAACGAATTTG 5469 32 100.0 34 ................................ CGTAGCTTTTATGGCGTCTTCCACGTCTGGACAA 5403 32 100.0 33 ................................ CTTTACCTTACATATGGCGCATGGGTTTTCAAA 5338 32 100.0 34 ................................ AGAAAGATATTGGCGCAACTTTTACGGTGCTCTC 5272 32 100.0 34 ................................ CAGGCTCGGATATCCTCGTTCCCGTCCTTACCTT 5206 32 100.0 36 ................................ GTCTCGCCCGTCTCCGGGTCAGCGAAGCCCTTCAAA 5138 32 100.0 35 ................................ CCGATGTATTCCCGCGCCTTGGCATCACTGCAGCC 5071 32 100.0 35 ................................ GACCGTCTGCTGTCGCAAAATAGAAATCCTGCCCA 5004 32 100.0 33 ................................ ATGCCTTCAACCCAAGGGAAGTAGAAGACTTCT 4939 32 100.0 34 ................................ CCGTCTCGCTGTTGAGCACTGTTTCAGCGTAAGC 4873 32 100.0 35 ................................ CCGGAGGGAGTTAGAGGCTCCCTCCTCCCAATCTT 4806 32 100.0 33 ................................ CTATATTACTAGAAAGATGTACGTAGGGGACAG 4741 32 100.0 35 ................................ TTAAGCAACTTTATCTGGCAGCTGGCCAAGCGGTC 4674 32 100.0 34 ................................ AACACAAGTCGGCGAACATCATACCCATGCTTAC 4608 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 27 32 100.0 35 GTCGCACTCCATGTGAGTGCGTGGATTGAAAG # Left flank : ATGAGTACCCGCCATTTTTATGGCAGTAGGTGAGTCGGGATGCTTGTACTCATTACTTATGATGTTCAAACAACAGGCGTGGGAGGGGCCGCGCGGCTCCGGAAAGTGGCTAAGGCATGTCAGAACTACGTGCAGCGGGTGCAGAATTCCGTGTTTGAGTGCATTGTGAATGCAGCCCAGTTCACTGCTCTGAAATTGGAGTTAACCCAGTTAATTGATGAAGAAAAAGATAGCTTGCGATTTTATCGGTTGGGCAATAACTACAAAACCAAAGTAGAGCATATTGGGGCCAAGCCATCGATAGATTTAGAGGAGCCGCTTATCTTCTAGCGGTGCGAACCCCAAGCGCACATAAAATCCCTGGGAGGTTCGCACCCCGCGTCATTAAAGGATTTGTAGAGATTTTGGTTAAAATTAATGGAAAAATTTCGTGCTCGCAAAATGGGTTCGCACTTTTGGGCTTACGAGGCCTTGTGCCACAAGGATTCGCATGGCCCGCT # Right flank : TTATGCGACGCTCACGGCGGAATACCCGGACATAGTCGCACCAGCAAAATGAGCTTTTTCTCGAACAAGCGGTCAAACGATTGAGAAATATTCAGTCCTTAAATAGCCGGGGATAGAGAAGAAAAGTACGGGCGGGGGAATGACGGAGGAAACGGAGGTCCTATACATCGTTATCAGCAAACAAGAGGTGTCCACGCTTAATAAGATTGTCAAATCCATCGACAAATCCGCCTTTATCACCATTCACGACGTGCGGGATGTGTTTGGCGAGGGGTTTTTGGATATTTCGAAGTGAGTGACAAAAAAACGCAACCTTATTTGGTTGTGGTTTTTTGTTTCTCAATAAGTAAGTTGGCAAGACGCTGATAGCACTGTGTGCTCAAGTTCGACCTGGTATAATTTGTTTATGGAGCAACAAGGAGATGGTTACTATTAAGAGTTTTGTGAAAATCAATATAATGAGTTTTGGATACGCGGTAATGTTATCTTTCCCTATACAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 12529-11492 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGML01000027.1 Paenibacillus macerans strain DSM 24746 sequence27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 12528 33 100.0 34 ................................. GATCATCTACCTTGGTAATCAGACGGACCTGCTT 12461 33 97.0 35 ................................C GCCGGATCGTTACGCGGTTGCTTTCCTTGGTGCAT 12393 33 100.0 33 ................................. GATTTGCCGCCACCGGCCGCGCCTCCGTATAAC 12327 33 97.0 33 ................................C GCTATGCGCTGGTCGAGTCCGACACGATGGACA 12261 33 100.0 36 ................................. GGAGATGGCAGCCTATCAACTTGCATAAACATCCAA 12192 33 97.0 34 ................................T GTATGCTGATTTGGACATGGATTGTAATATCATT 12125 33 100.0 35 ................................. CAGCTGGATTAGAGGCGGGGGCCTTTAATCTTGAC 12057 33 97.0 33 ................................T CGGGTCAGGACGAGTGACCCTTCCGCCACCAAT 11991 33 97.0 33 ................................A GTTGCGATGAATACAATTGGTCCGAGATAGCCA 11925 33 97.0 34 ................................C GCCGATGGAACCGGATAGCGTTTTTGACGAGTGC 11858 33 97.0 35 ................................A TTTTCGGGAGTTGGAACGGCTGGCTCACGCTTGAG 11790 33 100.0 35 ................................. TTAATCTCAAAATCTTTGCGGTCCCGAAACTTCTT 11722 33 100.0 34 ................................. GGACGTTGAAGGCCGAGTAAAGGCTGCTGCCCCG 11655 33 100.0 32 ................................. CCGCTGGGAATTATCCTGCGGCTTTTTGCTTG 11590 32 84.8 34 ........-..C.C.......A..........C CTATGTCTTGAAACTATTTTTAAATGAGCTCTAT 11524 33 75.8 0 ....T....C.C..C..A.........A...AA | ========== ====== ====== ====== ================================= ==================================== ================== 16 33 96.2 34 GTCGCACCCTAGGTGGGTGCGTGGATTGAAAGG # Left flank : CGACGAATACCCTCCATTTCTGTGGAAGTAGGTGATTATGAATGCTGGTATTGATTACTTACGATGTGAGTACGGTGAATGCCGCGGGACAAAGACGGCTTCGCCAGGTTGCCAAGGCCTGTCAGAATTACGGGCAGCGCGTGCAGAACTCCGTATTTGAATGTATCGTAGATGCGGCGGAATGGGCCGCGCTTAAAATTAAGCTGATCGAATTAATCGATCCGGAGCAGGACAGCCTGCGATTTTACCAGTTGGGCAACCAGTATAAAAACAAGGTGGAACATGTAGGTATCAAAGCCTCTCTTGATTTGGAGGGGCCTTTGATTTTGTAGTGCGAATGTGAAGCGAACATGATTTTCCCGGGGGATTCGCACCAAAATGATTGCATTACATTTGAATAATAGTAAAATAAATCCATTTTATTTGTTTAAAACTAGTCGGAAAATTAGATTTTAATACAGAATATGTAATTTATAATCCATATTCTGTTAGAAATCGGA # Right flank : CGTCCAGCAGAATCGGGAAAGGGCGAGACAGTATTCCAGGAGGGCCATCCCCCTCCTCGCACTTAAAGTAAGGGTTGAACAAGCCGCTAGAGCAATTTACTCCGGCGGTTTTGTTAACTTATAAATCACGGAAGTCAATCTCAATTCCCGCTCACTTGAACAACATAGCCGGCCCTCGATTCAGCAAGTCTGTTTTTTAAAACATAATAAGTAGGTTTATCGCATTCCGCAAAAAACAGGTATCCTTTTAAATAGATTCAAAGCAGGTATAATTACGGCAAAGGAGACAGATCGCATGTTGATCAGGAACGTATATCTGCGCCTGTCGGTCAAGTGGAAGGTCATCCTCATTTTTACCTCGCTGTTGGTGTTCATGAGCGGTTTATTTATCATTGGCTTTAATTACATCAACAAGCTCTATGATCGCCAACTGCTGCATAGCTCTTCGGAATTGTTGAACCTATACTCTACAAATATTGAGAATGAACTGCGCAAGATCG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTAGGTGGGTGCGTGGATTGAAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 22644-20947 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGML01000027.1 Paenibacillus macerans strain DSM 24746 sequence27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 22643 32 100.0 36 ................................ CTTGTGACTTATACCCATCAAGCCGGGATTGACCGC 22575 32 100.0 35 ................................ GTTAACAAAATGACGAGCTGCCGGCGAAACCTTCA 22508 32 100.0 34 ................................ TCCGTTTGTCAGCGCCAATCGCGGCGGAGGTGGC 22442 32 100.0 34 ................................ AGTACGACAGAGGCGGATTGGGCGTACGCACAAG 22376 32 100.0 33 ................................ AGGCTCTCTAAAACCTGCTTGACGCCGTCCACC 22311 32 100.0 34 ................................ CGCCAAGTAATGCTCTACATAGAAAGAGCCGCTA 22245 32 100.0 34 ................................ AAGACTACCTCAAAAAAGAAAGCGCCAAGGTGGT 22179 32 100.0 34 ................................ AACTCATAGCAAACATTTTAGATGTTGATCTAGA 22113 32 100.0 37 ................................ TTCCTGCATCCGTAATCACCTCGCCTCCAAGGTAACG 22044 32 100.0 33 ................................ AGAACAACATCAACAACTGGATAGGCCGGCGGA 21979 32 100.0 33 ................................ CGAAGCGGTTGCGCGGGAAGACCGCCTTATGCG 21914 32 100.0 34 ................................ AGCGACTTGGTCATGAAATTTCGGAGCTCTGCGC 21848 32 100.0 37 ................................ ACGCCGTTATTCCCGGGACTTACGAATTTCGGGGCCA 21779 32 100.0 33 ................................ TTGAGTTGGTCGAATTGGTCGCGCTGTTCCTGC 21714 32 100.0 34 ................................ GGGTTAGGCAGGGCAAAGGCTGAGGCGGAACGCG 21648 32 100.0 36 ................................ CCTTGCGCAATATCCCACGCGCCCGAAACCGTCAAC 21580 32 100.0 36 ................................ CCTTGCGCAATATCCCACGCGCCCGAAACCGTCAAC 21512 32 100.0 34 ................................ AAAGACTTGATCTCTTTTAGTTGGGTTAATTGTA 21446 32 100.0 34 ................................ TCCGGGCACGCCGGACGTTGAAACGTAGCAAAGT 21380 32 100.0 34 ................................ AGAGTGCTGCCTACATTAAGCTCCCAATAGCTCC 21314 32 100.0 35 ................................ ATATCGAGCAACAGGTTAAGGCGCTTTCGCGCGGC 21247 32 100.0 36 ................................ CGATCAGCGCGCAACAAACGAAGCTGCGCAAGAACT 21179 32 100.0 35 ................................ GCCAAGAAGTCACGCTACGTCCGGGCTACGTTATT 21112 32 100.0 35 ................................ CTCGATGAACTTGATCCGTTTATTGGCATCTTCTG 21045 32 100.0 35 ................................ ACGGCGCCGTCCAACGGATTATAAGCGAAGGTCTC 20978 32 81.2 0 ......................AA.AGCG... | ========== ====== ====== ====== ================================ ===================================== ================== 26 32 99.3 35 GTCGCACCCTACGCGGGTGCGTGGATTGAAAG # Left flank : AGCTTAGGCTTGCAGCTAGTCGTTTGGGTTTTTCATGAAATGATTCTCTTTTGCTATCCATTCCTCTAAACCTTATATTGAGATATAAAAGGCACCACGTAGGGTGTCTTTATCGCTTTATTTTGGTGCTTTCTGCTGTCTTTTTAGTCTCATATTGGTAAACGAGCTCCGTACAGGTAATAAAAATGATCTTTTCTGTGTATGGCTAGAAAAATGAGGTTAAGATTTCATATTCAATCAAAAATATTTGCGAAAAAGGTTTACCCTTAGAGTAACTGTGAAGTAACATTTCAATATACATTGTTTGTACTTTAGCTCAACTCCATATTCGGTGCGAATATAAAGTGAACATAAAAATCCCGGGGGATTCGCACCAGATTAATCGTGCTAAATACCCTTTTTTTCAATAAATACCCATATATAACTTTCAAAAATCCTTAAATTTGGGTTTATATAGATAATTAACTCTAAGATTTTACTAATATATGTTAAAAAACGCT # Right flank : GGCGCCTTCCTTACAGAGTTTATAAGTCATATCTCAATGGACAGTCCATACTGGGCTGTCCTTTTTTAGTTGAAGCTGTACTTTGTTGATATGGGGGCATAAGAGCATATGATAATTCTCTAAACTAAGATGAAAGTAATATTACCCAGAAAATTGTAGAATATTGGAAGGAGATTAGAGGGGGGGTGAAGAAATAAAAAAGTTGTAGTTCTTTAGGCGTGTTTCAAGCTTTAAACTAGAGAGTCGTTTGGATTATTTTTCAGCGACAGGAGGCAGGCAATGGAATACATAGCCCATATACGTGAGAGTGACCGGGAAAACCAATTGCTTGAAACGCATTTGCTTGGGGTCAAGAATTTAGCCGAATCTTTTGGTGCTAAGCTTGGAATCGGGCATATTACCGGCCTGGCTGGAATCCTTCATGATATGGGGAAGTTCACGAAGGCATTTCTGGATTATCTCATCGAAGCGGTGAATCATCCGGAGGCTCCGCCAAAGCG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACGCGGGTGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 729-228 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGML01000007.1 Paenibacillus macerans strain DSM 24746 sequence07, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 728 32 100.0 34 ................................ TTTGGCGGCAGCGGGTCGACGCTGATGGCATGTG 662 32 100.0 37 ................................ CGGTTGTTTAAGGAACAAATCGACGGTGGCTTGAATG 593 32 100.0 35 ................................ ATGCGGATCTCGAAGGTTGTTGATTGCAAAACGTA 526 32 100.0 36 ................................ GTAGCTCTAGGGCTAATTACACTGGTAGCCAAAGTC 458 32 100.0 34 ................................ AGGTCAAGCCACACCAAACCTTTGCTTAAACATC 392 32 100.0 34 ................................ CAAGGATCCAAACGGCAACGGCCAGAAGGATGAG 326 32 96.9 35 ...A............................ TTGCCGGGATCATTGTTTTTTGACCTATTACACCA 259 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 8 32 99.6 35 GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Left flank : CGCTCCCTATGTGGGAGCGTGGGAGGAATTATCGGATTTGTATAGCGGCAAACCGGGCTTTTTGGACGAGTTGAGTCAATTTCATGACCGGTCTAATTAAAGAACTCCTCCCTCGTAGGGGAGTTTATTGCTCAACTAGCTTGGCTACAAAGTCAGTAGACCGATTCATTAGAGAGATATTTGGGAAACTGTGAGGAAAAAGTTTTGGCCGATTGGAATCGAAATAAGTGCGTAAGGCTTTGTGACTTTAACGAGAAATATACGACGATGTAGCCTTCAAGTACTAAGAGGAAGATAATCAATTGGCTGTAAAAAACGGGGAAATAGCAGCGGTGCGAACCCCAAGCTCACATAAAATCCCCGGGACATTCGCACCTCTTGTCTGGCGTGGGATTCCGGGATTTTGCGGCTAAATTTTCCCTATTTTTAAACCATAAAAAAGGGGATTCGCACTAAAGCGTTTCCAAACCTATGCTGGGTGTGGGATTAAGATGAACGCA # Right flank : GGTTAATAATCTTGATGTTGCGTTGCTTGAGATCTGTACCTCTGTCAATAGAGTAGACACAAAGAATCGAGAAAATTATGCGGCAGATCGGTACATACGTTCGCACTCATTGGGCGTAGAATACCCAATCGCGGAATGGATTCGTTTTCCATTGTAGAAGCAGGTAATATATTCAAAAATGCGTTTCTTGGCTTGCTTGCGTGTTTTGAACTTCTCCAAGTAGACAAG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2177-1199 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGML01000007.1 Paenibacillus macerans strain DSM 24746 sequence07, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 2176 32 100.0 35 ................................ TTTGGTTGCGTCCAGGAATATTTTTAGTTGTTCTT 2109 32 100.0 37 ................................ GGTTACCCCAAAATGATAAAAAAGGACCAGATGACCC 2040 32 100.0 36 ................................ CGAATCGTCCAAACCAGCGCCACAACCGACAGCACC 1972 32 100.0 35 ................................ ATGTAATTGAACATCAACACTGCCGCAATTTCCGT 1905 32 100.0 35 ................................ ATGATTTTGCCGCCAGTTACGCGGATAAAGTAACG 1838 32 100.0 34 ................................ AATATGGTTGTTTACGGCGTTTATGGCAATCAAG 1772 32 100.0 36 ................................ CAAGCGGAGCGCGACCGGATGCTCGAATTACTTGCC 1704 32 100.0 38 ................................ GATTCGATGGACTATCTGTTGCGTTTCGACGGCTTATC 1634 32 100.0 33 ................................ CTCAAACTTAGCGTCAAGTTCTGCGGACATGTC 1569 32 100.0 35 ................................ CAAGACAATGCGGCTGATTGTAAACCTCGTAAATC 1502 32 100.0 34 ................................ CAGCCCGCTATATGGATTACGGTTTGGCAAAGGC 1436 32 100.0 35 ................................ TGTGAGGGTGACAATGAGGTCGTAAAGCGAACCAT 1369 32 100.0 36 ................................ TTCCGCAAATTCGCCCGTTTTGTTTCTGAAATCGTC 1301 32 100.0 39 ................................ TCTTCCAGCCGGTCGATCCGCTTATGCGCCTGCTTGGCC 1230 32 84.4 0 ........................GAG...TT | ========== ====== ====== ====== ================================ ======================================= ================== 15 32 99.0 36 GTCGCTCCCTATGTGGGAGCGTGGATTGAAAG # Left flank : CGCCAAATGATCGAGGAATTAATGGATTTATATAGCGGCAAACCGGCCTTTTTGGACGAGTTGAGCCAAATCCATGACGGGTTAAATTAATGAGATCCTCCCTTGGGGAGTTTTTTGTTCAATTTAGAAGTCGTCGCCGCTTGGCTATACGGCCAAATTGACCGATTATTCATGGATGGATATTAGGAAATTTGTGGGGGAAAAAGGTTTTTGGGCGATTGGGATCGAAATAGGTGCGTAAGGCTATGTACCTTTAACGAGAAAGATACGACGATGTAGCCTTGAAGTAATGAAGAGTAATCAATTGGTTGGTAAAAGCGGGAAAGAACAGCGGTGCGAACCCCAAGCTCACATAAAATCCCCGGGACATTCGCACCTCTTGTCTGGCGTGGGATTGCGGGATATTGCGGCTTTGTTTAACTTGTTTTTAAACCATAAAAAGGGGATTCGCACTAAAGCGTTTCCAAACCTTTGCTGGATGCGGGGGTTAGGTGGACGGA # Right flank : ATCGGATTTGTATAGCGGCAAACCGGGCTTTTTGGACGAGTTGAGTCAATTTCATGACCGGTCTAATTAAAGAACTCCTCCCTCGTAGGGGAGTTTATTGCTCAACTAGCTTGGCTACAAAGTCAGTAGACCGATTCATTAGAGAGATATTTGGGAAACTGTGAGGAAAAAGTTTTGGCCGATTGGAATCGAAATAAGTGCGTAAGGCTTTGTGACTTTAACGAGAAATATACGACGATGTAGCCTTCAAGTACTAAGAGGAAGATAATCAATTGGCTGTAAAAAACGGGGAAATAGCAGCGGTGCGAACCCCAAGCTCACATAAAATCCCCGGGACATTCGCACCTCTTGTCTGGCGTGGGATTCCGGGATTTTGCGGCTAAATTTTCCCTATTTTTAAACCATAAAAAAGGGGATTCGCACTAAAGCGTTTCCAAACCTATGCTGGGTGTGGGATTAAGATGAACGCAGTCGCTCCCTATGCGGGAGCGTGGATTGAA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATGTGGGAGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 3407-702 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGML01000034.1 Paenibacillus macerans strain DSM 24746 sequence34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 3406 32 100.0 33 ................................ TCTGGCCATTACATCACCACCACCCCCAACGAG 3341 32 100.0 34 ................................ CTGTTCGGCGGGAAAGACGAACGTTCCCAAGACC 3275 32 100.0 33 ................................ ACTCGATCTAAGGTGGCTCTGCTGGACTCTAAA 3210 32 100.0 35 ................................ TTCGCAATGCCGAGACGCCGGAGCGCGGCATCGTG 3143 32 100.0 34 ................................ ATAGGATCACCACCACTTAATTAATGACTTAAAC 3077 32 100.0 35 ................................ CGATGCTGCTGCGCTCGGGTTTTTCCTTGTGCGCC 3010 32 100.0 36 ................................ AGGGAATTGAATATCAAGTGGCGTATATGCGCGATG 2942 32 100.0 36 ................................ CGTACAAGCCGCAACCCAGGCAGCAGCTTTACCATC 2874 32 100.0 37 ................................ AGAAATGTATTTATCCCCGGTTGTTGTCACTGTTAGG 2805 32 100.0 33 ................................ CCCATTAGAGAAGGAGGAAGAAGCAAAGTGAAC 2740 32 100.0 35 ................................ TCTTGAGCCTCTGTCAACTTAGGGCCACTCACAAC 2673 32 100.0 35 ................................ CCCATGAACAACAATGACCGGATACAAGAGATAAA 2606 32 100.0 34 ................................ GCTTTGCCGAGTTGCTACCATCTCGTGGGCCACG 2540 32 100.0 34 ................................ GTGCATCCCTTTGGATATTCAAAAGTAGCCCTTA 2474 32 100.0 35 ................................ ATTACCCTTTGCGACATCGACTATTAAAGTTACTT 2407 32 100.0 35 ................................ ATGAGTTTGGAGAACAGTGTTGCAAGTAAGTTGTA 2340 32 100.0 35 ................................ AACTTAGCAAAACATACCGTTTTTGCATGGATCGC 2273 32 100.0 35 ................................ AAACATCCCGATGATCGCTGGATTTTCCTGCTTAT 2206 32 100.0 33 ................................ CAATCCAGTACACGCTGCTCCTTTTCGTCGTGA 2141 32 100.0 35 ................................ ATAGTTAAACACGACGATGATTTTTTGAAAACAGC 2074 32 100.0 36 ................................ CCAAGCCCCGCGCTGCACCCGCCCCACGAAGTCCTC 2006 32 100.0 36 ................................ TTGAGAGTAAAACCGACAATCCAGCATGCAACAACC 1938 32 100.0 35 ................................ ATTACGATCATTCCTTTCAGGAAAATAAAATACCG 1871 32 100.0 34 ................................ AACTGGCATCTAATCACCTCCTTTTGGCATATAA 1805 32 100.0 35 ................................ GTGTGGTACCTGGCATATTGCTGTGACATGTGGAA 1738 32 100.0 36 ................................ GCGCCTCAAATTACTATCCAAGGCGGCGGTGACTCC 1670 32 100.0 35 ................................ CGGCCATCCACCGAACACCGGGCGACCGCCTGATC 1603 32 100.0 33 ................................ GCATTGATATACAAGTCCGCGTCATTTATCGTT 1538 32 100.0 34 ................................ TTGGCTCTGTCGATTTCGACCCCGTCGCATGCCA 1472 32 100.0 36 ................................ GCTTAGGTGGGTTGTATGAGTAATAAAACGCATAAA 1404 32 100.0 35 ................................ TTAATAGGAGGACTTATGTATGAATCTCGTACCGA 1337 32 100.0 33 ................................ AAGCAGCCTTAGAAATGCTGCATCCGACCGGGA 1272 32 100.0 35 ................................ CGTAATTGAATCCGTTTATGATCAGCCGATTGTTC 1205 32 100.0 36 ................................ TCTAACGGCAAAATCCGAACGGAAGTATTCGAAGCA 1137 32 96.9 33 ......................A......... CCGAACATGTTGCCCGGCATCCGTATGCCGCGA 1072 32 100.0 36 ................................ AAAGGTCGTCAGGCTATCGCTGTACCAGTTCTTGCC 1004 32 100.0 35 ................................ GTCCTTAGCGTGGCCCAGTTGCTTTCGGATGTCAT 937 32 100.0 36 ................................ GAAAGTGTTCGGGTTTATTGCTGACGATGTAGTCCC 869 32 96.9 36 ............A................... TTCGATCAATTCTTTAAAACTCCAAAACCGTATTGT 801 32 93.8 36 ..........C.A................... TTTATCCGGAGCACAAGAAATTTCAAACGATAATTC 733 32 90.6 0 ..........C.A.........A......... | ========== ====== ====== ====== ================================ ===================================== ================== 41 32 99.5 35 GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Left flank : CGTAAAGCATTTAACTGGCCGAAGCCAAAGAATTCCGAAAAAATAAACGTAGAACAGACGGCAGCAACGGAAATTGAGGACATAAAGAAGCAGTACGATTTGCAGAATTATCGGGTGTGCGTTAACCTGGACAGCAAGAGCGGGGAAAAAGAAGAAATCTCGCTGCTTTCTCTAACGTTTCAACTAAATCAGCTTTTGATGCTGATTAATAACCCGATGTTATTCCCACATAAAGCCTATGTAGATATGTTTAACGAGCGGTATACGAAGGAGTAGCCTTGGAGCATGAACCGGGAAGTAATCGTTCTCTAGCAAAACGGAATATAGTGGCGGTGCGAACCCCAAGCTCACATAAAAATCCCGGGACATTCGCACCTCTCGCCCAGCGCGGGATTTCGGGATTTTACGTCAATACTTACCCCATTTATTAACCATAAAAAAGGGGATTCGCACTAAAGCGTTTTCAAACCCTTGCTGGATGCGGGGTTGAAATGATCGCG # Right flank : AATTTTACGCTGCTCATTTCTTCCATTTTGTGTCGCTCCCTACGAGGGGCTAGAATGGGATTTACTTTCCCAAGAAAGAAAAAAGACTCGCTAACTGGGTACGTAAGAACGAGCCCATAGGTTAATTTTGTACACATGAAGGAGAACCAGCTCACCTACTGTCCAAAAATTCTGAAGAGAATTTCTGGACAGTGAGCCCTTTTACATAAAAATAAGGAATTGCATTTTCGTATAAATTTAAAAAGAAGAACTACGAGTCTGCCTAAAAATCGATGCTTGACTGACGGGTTAGCCTCGAATGATCGATCCATCCGAAATATTTTCTACGCTAACGGTTGTCAGCGCGCCTATTCGGCCGAAAATCGGGGGGTTTCTTTTCTAAGGGTTGTATATGCACTAGCGTTGCAAGAACACTAACATCAATTTTCAGCAAAACCCACATTTGGATTATTGAAACTATAAATGGATTTTTTTACAGTCATTTTTTAAGCTTAAGACCA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 12198-11967 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGML01000034.1 Paenibacillus macerans strain DSM 24746 sequence34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 12197 32 100.0 35 ................................ GAGTAGGGTTTCCGCACATTACAGCTTATTGAATT 12130 32 100.0 33 ................................ ATCCATACTGAATGCACCGAGAAAGTCTGTATA 12065 32 96.9 35 .............T.................. GCCGACGGTCGCATATGTATGCCCATCCCCAAGCG 11998 32 93.8 0 .............T..........C....... | ========== ====== ====== ====== ================================ =================================== ================== 4 32 97.7 35 GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Left flank : GATACAGGGTGTTGTCGCTGATCCCCAGTTCGCGGGCGACCTGCGCCACCGCTTTCCCTTCTTCCTGGATCATCTGAATCGTTTGCAGTTTAAATTCTTTATCGTATTTTTTCGTCATGGTAGCACCTCGAATTTGGATAGATTCATTTTACCCGATTCTCGGTTCTCCATGTCTACTTTTTAGTCTAGCAGCAAT # Right flank : ATGTAAAATCAATACCAAGTTGCCCCTTAAGATAACGCCACTCTCAAGCCTCAGCGTTCCTCTCTGCACGAGAGGGTGGAATGAAAGAAGGTCTGATTCTTTGCGATTACCAGGATCAATAGCCACTTCCCACATAGGAGTATCTTAATGAAAATTGCCTTTGGTTAAAGGCTTTTTTTGTACACTCAAGGAATGTGGAAATGTTCGCGTGTTTAATGTGGAGTGATTTTAGAGTGAAGCCCCCTCCTTATCAATTGCCTAGATGATTACTCCTTCGCTTAGAGAGAGGAGATAGATAAAGTTAAGGGAGGTTATGGAATTAACGGATTTATAAACGGCAAACCGGCCTTTTAGATGAATTGAGCCCAATCCACGATTAGACAAATTATTGAGCTCCTCCCTCGCGGGGGGAGTTTTTTGCTTAACTTGGAAATCACTGTAGAAATCCGCCCACAAAGGCAATCACAACCCTCAGATTCGTTTCTCACTCTTGCTTTAAG # Questionable array : NO Score: 8.75 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //