Array 1 226971-228769 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKNC01000002.1 Klebsiella pneumoniae strain EuSCAPE_IT045, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 226971 29 100.0 32 ............................. CGATCGTCAATCTCTGGCAAGCGCTGAAAATT 227032 29 100.0 32 ............................. CCAAATGGGAGCATTTATCTTTTCGCCGGTCA 227093 29 100.0 32 ............................. AGACTAATTATATACACACTTAATCCTGAGTC 227154 29 100.0 32 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAG 227215 29 100.0 32 ............................. TCATTTCTGACGCGAATGGCCGACATGCTGGG 227276 29 100.0 32 ............................. GAAATTAATCGCCCGTCTTCGCAGTCCTGCAA 227337 29 100.0 32 ............................. GCCAGTAGTTTTATTTCGAAATGCATTTCATT 227398 29 100.0 32 ............................. TAACCCACCGCAATTACGCGAATTAAACCCCA 227459 29 100.0 32 ............................. TAACGTCGCGGTGCGTCATCTCATCGGCAGTG 227520 29 100.0 32 ............................. TTGAGTTCGGGTCACGCCGCCGGGGTTGAGAG 227581 29 100.0 32 ............................. GCCTTTTCCGTTTTGCCGAAGAGTGTTGCGAA 227642 29 100.0 32 ............................. GATTATGCAAAACGACTTAGAGCCATAAGAAA 227703 29 100.0 32 ............................. TTTTCGGAATTACTGCGAGCGAGAGAGTGTCG 227764 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGCGGC 227825 29 100.0 32 ............................. TAACAGACGTATCATTTATGTTTGCTTACTCT 227886 29 100.0 32 ............................. GAAGTTAGCGATTATTTTTTACTGGAGAAACA 227947 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGGG 228008 29 100.0 32 ............................. ATTACATCGTTTTCCGGGTTTCGTTTGAGCAA 228069 29 100.0 32 ............................. GAGGGGCCATGGAGCCGGTGTTGATTGCGTCC 228130 29 100.0 32 ............................. CGATTGTCGGTGGTTGTCTGCTGGTATCTGCT 228191 29 100.0 33 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAGC 228253 29 100.0 32 ............................. GCGTTGTCGTCTAACCCGTCTAACCTGCGCGG 228314 29 100.0 32 ............................. CAGGGTCGCCGTATCCTTCGCCAGATGGCGGA 228375 29 100.0 32 ............................. TTACAAATCGCCTCGGGTGGTGCTCTGAAATA 228436 29 100.0 32 ............................. GAAATTCTGATTTTTTTACCGTGGATTTCCAC 228497 29 100.0 32 ............................. GCTATGGGAGTTAATGACATGGAACAGAAATT 228558 29 100.0 32 ............................. GCTCTTCTTCCTCCGCGAGTTCTGCATACGTG 228619 29 100.0 32 ............................. GATTCTAATTGACGTTGTAATAATCGTGTGTG 228680 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 228741 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 30 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCGGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //