Array 1 2064058-2066289 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019581.1 Lactobacillus helveticus strain LH5 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2064058 32 100.0 34 ................................ AATGACTGATGAACAAAAGACAGCATTGAAGAAT 2064124 32 100.0 36 ................................ TGTTCAGCTCTATCTTGATGTCAAAGATCCTAACGG 2064192 32 100.0 36 ................................ ATTCTGTAAGGACTGAAACACAAACTCTAAAATATA 2064260 32 100.0 34 ................................ ATCGTTATGCAGGTATTACTACTGCTACTAATAC 2064326 32 100.0 35 ................................ TCAGGAGATACTGCCGTTGGCTTTGAAGATAAATA 2064393 32 100.0 35 ................................ AATTCATTACTGGCATTACTCCAGTCACTGCGCCA 2064460 32 100.0 35 ................................ GAAAGGAAATATATATGTCAGTCAAAGTTAATGGT 2064527 32 100.0 35 ................................ GATTTTGTTAGAAAATTAACCGATGATTTTTTACA 2064594 32 100.0 34 ................................ TACCCACCTAGCTTAGCACCTACATGGAATGACA 2064660 32 100.0 36 ................................ CATTGTAGTAAAAGTTGCAGGGTCTTGAGTAAGAAC 2064728 32 100.0 34 ................................ AATTAAGTCTAATCATAGGGGCAATAATTGCTTA 2064794 32 100.0 35 ................................ TTTTTCGTCTTCTGCTCCTAGTGACTTAGTGAGCC 2064861 32 100.0 34 ................................ AAGTGAATCGACAGGTATTGCAGATGATGATTTA 2064927 32 100.0 35 ................................ AAGATGTGGAAGAGTGCAAGCACACACAGTCCCAA 2064994 32 100.0 34 ................................ TTAGAATACTTATGATCCTTAGATAGATGAACCG 2065060 32 100.0 35 ................................ CTCTGATCTGCTCAGCACGTTGCTCTTGCTTTGAA 2065127 32 100.0 35 ................................ GATTATTCGGAACAACAGATGATCCTAAATGCTCA 2065194 32 100.0 35 ................................ CTAAAGCATACTTAGTAGCATATGAACTGGCTGAC 2065261 32 100.0 34 ................................ TACAAACACTTGCCAACTTATAATCCACAAATGC 2065327 32 100.0 34 ................................ AAAGGTGTGTGGATACCTGCTGAATATTGGTTAG 2065393 32 100.0 35 ................................ AGCATCAACGGCTCTAATTATGTCATTGCCGGTTT 2065460 32 100.0 34 ................................ ACCTGATCAAACGTTAGGCAATAGATTAACCGAA 2065526 32 100.0 34 ................................ TTTACGAATGTCTTGCCAATTAGTATATTTACTT 2065592 32 100.0 34 ................................ AGAATCAAGACCACCTGTTAGCGTTTTACCACCG 2065658 32 100.0 35 ................................ AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA 2065725 32 100.0 36 ................................ GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC 2065793 32 100.0 34 ................................ AGAAGATGGATACAATTTTTAGAAATTCCAGTCT 2065859 32 100.0 35 ................................ ACACCATATGTGGTCAACGCTTTAATTGGATTACG 2065926 32 100.0 34 ................................ ACTAACTGGAACATCCAAGTACTGTGCGGAAACC 2065992 32 100.0 35 ................................ ATCGGCTAATTGCTTTTCAAGTGAATCAGCCTTTG 2066059 32 100.0 34 ................................ ACTGAGACGCTAGACGCTATTAGATCACAGTCAC 2066125 32 100.0 35 ................................ ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA 2066192 32 100.0 34 ................................ TTTTGAATAGATGGCATGTAAGTCTGATATAGTT 2066258 32 96.9 0 ...........C.................... | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.9 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //