Array 1 798142-797809 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFON01000001.1 Gilliamella apicola strain wkB11 wkB11_scaf001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================== ================== 798141 26 100.0 35 .......................... CCGGTTCATCATTCACGCTGTCACAGATTAAAGCT 798080 26 100.0 36 .......................... CCGATTGGTTCGATATTAGCGATCCTATCACCACAC 798018 26 100.0 35 .......................... CCGTTATAGGAAGTGGACACAATGGTACTATGTGT 797957 26 100.0 35 .......................... CCGCAGCTCATCGGCATATTGAAAATGAGTTAAAT 797896 26 100.0 36 .......................... CCGTAATTAGGTATATTATGAGTCAAAACCACAAAC 797834 26 92.3 0 T..........T.............. | ========== ====== ====== ====== ========================== ==================================== ================== 6 26 98.7 36 GTGTTCCCTGTATACACAGGGATAAA # Left flank : CTAATTGAAGAAGTACTATCTGCAGGGGGGATTGAACCACCCCTTCCACCTGATGACATACAACCCCCTACCATCCCCGAACCACAATCACTTGCTGATAGTGGTTTTAGGAGTTACTAACTATGAGTATGTGCGTTGTGGTTACCGAAAATGTGCCACCTCGATTAAGAGGTCGTTTAGCTGTATGGTTATTAGAAATTAGAGCTGGTGTTTATATTGGTGATGTACCTCGCCCCATTCGGGAAATGATATGGCAGCAAATCATTGAACTAGCTGAAGAAGGCAATGTTGTCCTTGCGTGGGCAACAAATACCGAATCTGGATTTGATTTCCAAACTTATGGTACAAATAGAAGAGTTCCGGTAGATCTGGATGGGTTAAGATTAGTTTCTTTTTTACCTGTTTAAAATCAATAGGTTAAATTTTTTTAAAATTTTCAAAAACCTGGTAGAATTTATTCATTGCTATAACTCTAAATAAAACAAATAGCTACATTTAGA # Right flank : TTCTAAACAACATTAGTTAAAGTTGCTCTAAAATGGCAACGATTTGACCTTGCAAACCTTAAAATTTTTAGTGCGGTTTTAGGTGTTTGAAATATTAATGCTATTTCTTTCTTCAATGCTTGAAATGCCTGAAATTAAAACCGCACAAAACATCGTTAGAGGTTGTCGTTTTGCTATTCTTAATAATAAACAAACCGTTGTTATTAATAGTCATGTCAGCAAAGGGACATTATCTATTTTAGTTTTTAGTTATTTTATGACCAAAATTAATGCCTATTCTTTCAATGAAGTAATAGGTAAAAATGCTAATCAATAATGTTATCAACATGGATACAAGGCTATTTAATAAAAAGTTTCCGCTTTTCATTATTACGCCGTTTATTAGAAATAAAACAAGCCCATGTATTAGATAAAAACTGTAGCTTAATTTACCTAATGTTATGAAGATTTTTGATTTGAGTAGTCCAAATACACTATTGTTGCTTGCAATGAGAATAAAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 8767-9280 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFON01000002.1 Gilliamella apicola strain wkB11 wkB11_scaf002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =================================== ================== 8767 26 100.0 35 .......................... CCGCACAACAACCTAAACCGCCAGCACCAGCTCAG 8828 26 100.0 35 .......................... CCGCTTCGATCGTTATTTTGATAGAGAATTTAAGG 8889 26 100.0 35 .......................... CCGAATTGTGATTGATGAAGAAAAGCGCAGTAACG 8950 26 100.0 35 .......................... CCGTCCGTTTGCCCGTGAATTTAGTAGCGGGCTTT 9011 26 100.0 35 .......................... CCGATGTCAATTGTAGCTAACCTTGCAGGAATTAA 9072 26 100.0 35 .......................... CCGTACGCACCCTTCGATCGGTTTAACCCCTGCCC 9133 26 100.0 35 .......................... CCGACCCATGATTTTTCATCAAAATCAAATCTCCC 9194 26 100.0 35 .......................... CCGCGAGGTGGAATTCATACATCCTGTTGTTGGTT 9255 26 96.2 0 ...................C...... | ========== ====== ====== ====== ========================== =================================== ================== 9 26 99.6 35 GTGTTCCCTGTATACACAGGGATAAA # Left flank : AATATTAGATGTATATGAAGCTATGAGTATTAATCCAACTTATGAGTTTAGAAAAAAAATCAAACAGGGGGAAGATTTTTCGGATATTTACGAAGATGATTATATGAGAGTTGAAGTTGAATATAAATGGAAAGGGGAAAATAAGCTAGAGATTGTACAATATTTTGATGGTGGAGAGACTTATTACACATTTGTTAATCAAGAAAATAGAACAAAATTAATAACCAAATTTTCGCCAGATTAAAAAATAATACAAAATAGTAGCTTTTAGAGAGTTAAGGTTACTTGCAGGCAATAAGCAAACGCTACCGATACAAGGTTGGGTGAATATAAAAGACAATGCGCAAGCACATATCAAACGACGTAGTCCATGGCACTGGTCAGGTTTTAAAACGATAGAAGAGAAGGCAACGGTAGGCGAATTATCTGATAAAATCAGCAAAANNNNNNNNNNTTGTTGGTCGCTATAACTGTAAATAAAACAGATAGCTACAATTAGA # Right flank : ACTGAATATGTAACTTGTTCTCCTAAACTAACATTGCTAAAAAAATAGGCATTGATTCTACAGTCAAAAAACTTTGCCATAAATATAGAATCGGTACCTCAATTTTTCTATAAATGGCGAGAAAATACAGTGAAATGAAAACATCAGAAATCAAACTTTTAAAAGAGTAAGAAACAAAATCGAAAGTTTAATATGTTTATATTTTTCAGCTAATTATTGATATGTAAACTATTGACATAGTGACGAAACTGTATTTCCAAGGCAATTAAGTATATAATACCTTGCAAATTCAATTAATGATTATTACTAAACTTATACTTTTATGAAATCTTCAATTATCAGTAAGTTAGAAGCTCTACAAGAGCGTTATGAAGAGGTTCAAGCATTATTGTCTGACGCATCAGTTATCGCCGATCAAAATCGTTTTCGTTCTCTTTCTAAAGAATATTCACAATTAACCGATGTCGTTAAATGTTTTACTGGCTGGAAACGGACGCAAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 64674-64883 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFON01000002.1 Gilliamella apicola strain wkB11 wkB11_scaf002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================== ================== 64674 26 100.0 36 .......................... CCGTTACACATTGGACACGTCATCAGCTACTCATGC 64736 26 100.0 35 .......................... CCGTTAGCGCCCCCTCTGCTGTTACTGAACCAGCA 64797 26 100.0 35 .......................... CCGCTTTTGATATACGACACATTCCAATAATTGTT 64858 26 88.5 0 .......................CCC | ========== ====== ====== ====== ========================== ==================================== ================== 4 26 97.1 36 GTGTTCCCTGTATACACAGGGATAAA # Left flank : TTTGCAAACATACCACTACTAATCTCTAAATATTGATCGTTATAGGCATAGGAAGATTTTATTGGTTTGAAGTTATTATTGACGGATTCTTGAGTATAGTCTTTGGGCTTCTTTTGGCGTCATATTATCGCTAGTATAGCCCATTTTCAATTTTTTGTGGGTTGGGGTTTTTAAGCCTTGAGAGTACAAAGACTATTTATCCGCATAATGTTAAAAATATCGAAAATTATAACATAAAACTGGGTAAAATTAATATTTGTTTTTATTTAGGGAGATGTAATTTTCGTATCTTGATGAATTTATATTAAAAATAGAGTCATTTTGGTAGGGCGACATAAATTGAATTGAGCTTGTTTTTTTATTTTTTAAAATCAATAAGTTAAAAATCTTTAAAAATTTAAAAAATCTGGTAGAATTTGTTGGTCGCTATAACTGTAAATAAANNNNNNNNNNTTTGTTGGTCGCTATAACTGTAAATAAAACAGATAGCTACAATTAGA # Right flank : CCCCTTTATCTTAATGCTAAAACCCTAACCCCAGTTAATTGATAAAATTTTAAGTGGGGCTTAAAAGCAGCAATCTAAAAAAACATGATTCACTAAGCTTATCTTAAATTTCAATAAATTAAGTTTAATTAAATATTGCAAATTATGTAAAAATCGTGTAATTTTATGCCTGATTTTAGTTATCATTATTGATTATTAAAATTACCGATAAAAATAGGTAAATATGACAAAACTAAATAAAAATAAGTAGCAAGGTAGTAAAGGAAAAAAAATGGTAAAACATTTAGATAAAATCGTCGAACAAGCAGGGAAAGACTTGCTTAGCCAATTAACAAATAAAGTTAGCCATAACCGTTACACACTAACCATTGATGAACTCAGCACTCCTATATCGGTGTTAAACGTCAAAGGCGAAGAGGTCTTAAACCAGCTGTGGCATTACACCATTACTTTTACCAGCGCCAATAAAACCCTATCTACCGATGCTTTTTTAAACCAAC # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.84%AT] # Reference repeat match prediction: F [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 72630-73388 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFON01000002.1 Gilliamella apicola strain wkB11 wkB11_scaf002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================== ================== 72630 26 100.0 36 .......................... CCGCCCCCTGCAAATCATTCGGCTTCATACCTACGC 72692 26 100.0 35 .......................... CCGTTTTTAGTGTATTTTATAAAACAAAACCCTCT 72753 26 100.0 35 .......................... CCGTTTCCCAAATGTTTCTTCAGGTATTTCCATCA 72814 26 100.0 35 .......................... CCGCGGTTGAAAATCAAATAAAGCGTGCTCAATCG 72875 26 100.0 35 .......................... CCGCACAGCTTGTTCAGCAACTAAGTCATGTGGGA 72936 26 100.0 35 .......................... CCGTTTTACATCCAATAATCCCTGTTCTATCTTAT 72997 26 100.0 35 .......................... CCGAGGTCACTCACTCATGGTCTGTTTCGGGCGGT 73058 26 100.0 35 .......................... CCGATAAGCACGGCATTTTAATAGACGGCTACATT 73119 26 100.0 35 .......................... CCGCAAACAAACTTTGCCATTTTACTGGTGGATGA 73180 26 100.0 35 .......................... CCTTCCCTTTGATTCTCAGCAGCAGTCTTATTACT 73241 26 100.0 35 .......................... CCGCACAGCTAAAGACGTGGAAAAAATACCGCATT 73302 26 100.0 35 .......................... CCGTTTGTCTAACTGCGATTTATACAGCTCTGCTG 73363 26 84.6 0 .....................T.TCT | ========== ====== ====== ====== ========================== ==================================== ================== 13 26 98.8 35 GTGTTCCCTGTATACACAGGGATAAA # Left flank : ATGGCACACCGTGCAAAAATGTTAGACATTGCAAAGAAAGCTTTTGACGGGCTATTTGAAGAATAGAAACAACAAAAAGGCACTTATCGAAGCGAGATTAGATAAATTTGGCATCACCCAGCCTTATCAGCGAGACTTTACTCTGCAAAAAGTGCAACGCATTAAACCGTTATTCTGTATTAAACAATCGATAGTAATTCAGTGGATAATAAACCTTGTATGATAGTGAGCTGGTGTAAAAAATATACCATCAATCAGTAGGGCAAAGCTCACGCTAATACGAGAGTAAAAGATAATATTTTTTGTTTAGGTACATTCGAATATTTATATCTTTTTGAATTTAAATTAAAAATTGGTATTTCTTGGTAGAACGATAGAAATTGGAAAAAGCCTACTTACGACTTATTAAAAATCAATAAGTTAAAAATCTTTAAAAATTTAAAANNNNNNNNNNTTGTTGGTCGCTATAACTGTAAATAAAACAGATAGCTACAATTAGA # Right flank : TCAATCCATAAAATTCTTAATACCTATCTATAAAATATCTCATAATGCGGTTATCTACCGTTAACTCAGGGTGAAATGAACAAACCAAGATATTATCTTGTTGTGCCATTACACAATGATCATTAACGAAAGCAAGTTGTTTGACTTGTTTACTTGCTTTTATAATATACGGTGCCCGTATAAAAACAGCAGGAATTTGTTGACCGATTAGTTCAATATTTAAAAGTGTTTCAAAGCTGTTAATTTGTCGCCCAAAGCCATTGCGCTCAACACTAATATCGATTAAGCCAAGCTGTTCTACTTCATTATGTGTTGTGGTTTTACCGCAAAGCACAAGCCCTGCACAAGTTCCTAAAACTCCTTTACCTTGTTTAGCTAATTGTTTTATTGGCTCTATTAATCCATTTTGTTTTATTAAGCGACTAATAGTGGTTGACTCTCCGCCGGGAATAATTAAGCCATCTAAATTAGCTAATTGTTCGGGTTTCTGAACGAGTGTT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 424881-425090 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFON01000002.1 Gilliamella apicola strain wkB11 wkB11_scaf002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================== ================== 424881 26 100.0 35 .......................... CCGTCCGCTAAAATATCGTGATAATCCTGCGGCAG 424942 26 100.0 36 .......................... CCGGGAACAAAGGTGTTCTTTCACTTGCATGGGTTG 425004 26 100.0 35 .......................... CCGCAAGAATCGAAGTAGATAAATCTGAATATGAA 425065 26 88.5 0 ......T..........G.A...... | ========== ====== ====== ====== ========================== ==================================== ================== 4 26 97.1 36 GTGTTCCCTGTATACACAGGGATAAA # Left flank : TGGCCCGAATGGATGGTCGAAGCGTTTAATGCCACATCGCAAGAAGAACTCGCCGAAATCAAACAACGGTACCATATAACGGAATAACCCAGATGATTAAGGAATAAGGAATAATTATGCCATCAAAATTCCATAAACACGTTTAATAAAAAAGTTTTGAATCATAAAAGCTTATTTGCTTTTCTAAACAAAGTTTATAGTAAAGGAAATAAACCGCTAATCCCAAAAGTTTAAAACTTAAATTCAAAATAGTTATGACAAAGCTCACGCTATGATTAAAGTAAAAAGCAATACTTGTTTTTAATTAGAATCCATTTAATTTACATATCTCAATGATTTTTATAGAAAAGATGGGTATTTTGGTAGAATGCTATAAATTAAATCCACCCTAATTATTATTTATTAAAAATCAACAAGTTAAATTTCTTTAAAAATTTGAAAAATCTGGTAGAATTTATCGAACGCTATAACTGTAAATAAAACAGATAGCTATATTTAGA # Right flank : AATCTTCTCAGACTTTAGGTAAAGAATTGAAGTGCGTAACTTAGTTTCGATTTACAATTTTTATCGATGCTTGAAAACGTAACCCAAATATGTAGCGCGCTACAGTTAATGATTTATTAGTTTTAAATGACGATTATCAGACAATGAGGCATGTCCTTAGCTTACTCGCTTATTAAAGTATCCCCACCAATTAAGCATGATTCTGCGTTGTTCTCGGTAGGTAGCTCGGTTATAAGTTCTCCTCGCTCTATAGTATCGGCATAGGCAAGCGCTACTTCAATAATATTCGCATCAAATCTTTGCCCATTTAGCAGAGCTAATACCATTTATTAGGTAACATTAAGCAACGTGTTGGTAATTTCGATTCTAGCCATAGCAAGAGCTTGCATGAATTAGGAAAGTTTTTGTTCGTTTATGGTTGTTATTTGCCCTTTTATCGTTTTTTGAAAGCGTTTTTTATTTTGGTTACGAGGTTGGCATCAATCAAGCCTATATTCACC # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 98798-99128 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFON01000003.1 Gilliamella apicola strain wkB11 wkB11_scaf003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =================================== ================== 98798 26 100.0 35 .......................... CCGTTTTTAGTGTATTTTATAAAACAAAACCCTCT 98859 26 100.0 35 .......................... CCGCCTGTTTTTAGTAGCCAATACTTGCTTAATAC 98920 26 100.0 35 .......................... CCGATTGAGTTCTAATTGTTCTCTATTTTCAGACA 98981 26 100.0 35 .......................... CCGCCCACCCCAATATAGCTAATTTTTGGAAAGAG 99042 26 100.0 35 .......................... CCGCATGGCGATTACGAGAAGTGTTGATTGAAGCA 99103 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== =================================== ================== 6 26 100.0 35 GTGTTCCCTGTATACACAGGGATAAA # Left flank : AACTTAACAGGCTATGCTGGAGGCATTGATAAAAAAATTAAGCTACTACAAATTGAAGGCATTGATACTCAAAAATTTTATCGCCCAACTAAAGGAACAGCACTTTAAAACAAAAATATAATTCAGCAAACTATAAAGAGAAACAGTAAATATCTACTTTAGAATATTTTAGCTTTAATTGAATAATAAATATTAAATGATCGCCAGATCGGATTAATTAATATTTTTAGCATTTATACCGTTAAAATTAAAAAGTTTCTTAATTTTCAAATTGAAACAAATATTTTGATTAAAATTTTTTATTTAGATACAATAAAATTTAAATATCCTATTGAATTTAAATTAAAAATTGGTGATTTTTGGTAGAATAGCATAAATTGAATTGAGCTTGTTTTTTATTTATTAAAAATCAATAAGTTAAAAATCTTTAAAAATTCAAAAAATCTGGTAGAATTTATCGCCTACTATAACTGTAAATAAAACATATAGCTACGATTAGA # Right flank : ACCGGCTTTGCACAGCTTTCCAATACCATTGTCAGCAAATGGTTAAGGTGCTAGCTTCTTTGTTGATTGGTTATGAGTTATATTAATTAAATATCACACAATGCGCTGACAACTAAAGTTAACCTGTCAAATACGAACATTTGATAATGTTCATGCCTTGTTTAGGAAAATCACAAATGATTCGAAAAACTGGACGAGCATAGAAGAGGTAATTCCCATGCGACCACTTTGTTTCTAGCATCTGCATCGAGATTGTAAAGAAGGTTCGCCAAACTCTCTGCTCAGACATTACCAAAAAATTAATTGTATTTCGCAAAAGATAAAAACGCCTCAAATCCTAACTGTACTGAAAAATTTAAAGCTTACAGCACCAAATGGTTGCCATTTTAAAACAACGCTAACTAATGCCGTTTAGAGTTTATTTCTGTATATAGAGAACACGTTAATATGGTTATGAATAAAAAAGGATGCTCCTTGATCAATAAATTAATTATTTTCTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 117342-117011 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFON01000003.1 Gilliamella apicola strain wkB11 wkB11_scaf003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =================================== ================== 117341 26 100.0 35 .......................... CCGCAAAGAGTAGATAAACGCCCAAACATGGGGGA 117280 26 100.0 35 .......................... CCGTGAGCGAAAAAGTATATGACGTTGATTTACCG 117219 26 100.0 35 .......................... CCGAGATAAGCAGCGTTGCTATTTGAACGGCGTGT 117158 26 100.0 35 .......................... CCGATTATAACTATCAGCGTAGACGTGTTGGAGTG 117097 26 100.0 35 .......................... CCGCGGTTGTTATTAAATGCATCGGGCATCGAACT 117036 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== =================================== ================== 6 26 100.0 35 GTGTTCCCTGTATACACAGGGATAAA # Left flank : TAATAATCAATAATGATAACTAAAATCAAGCATAAAATTACACGGTTTTTATAGAATTTGCAATATTTAATTGAAGTTAATTTATTGAAATTTAAGATAAGCTTACTCAGCCAAGTTTTTTTAGGTTGCTGCTTTTAAGCCCACTTAAAATATTATCAATTAACTGGGGTTAGGGTTTTCGCATTAAGATAGAGGGAATATCTTTTCGTAATCAGGAGTAAACCACCAATAAAAAAGGGAATTAATCTAAAACAGTTATGATAAATCTTGTACCAATACGAAAACAAAAGGTGATGTTTTTTATTTAGGCTCAATCAAATACTGCATCTTATTGAATTTAAAATAAAAAAATTTTTTTATTGGTAGAACGGTAGAAATTAAAACAAGCCTACTTATGACTTTTTAAAAATCAATAAGTTAAAAATCTTTAAAAATTTAAAAAATCTGGTAGAATTTATCAGTCGCTATAACTGTAAATAAAACAGATAGCTACAATTAGA # Right flank : TTACCCTAGAATCTTTCACATTCGCTTCAATTTTACAAAAAAGCGGAATATTGCTATACTTATCTACTTAATTTCCACGAAAAGGAATTGTTTTGTCGATATTCATTTAAAATTTAACTTACCGACATAACAACAGTTTTTGCTTTTTTATTATCCTCTATTTTTTATCTTTGCTTGATTTTTCGTCAAATTTAATTAATTGAAACACATAGTTAATATGTAATTTAAAACGTATTTATTCTGTATTAATAAGTAACCGATTTATTTTGTTGCATTATTCCTTTTCTTTTATTTGCATAAAAAAAGGCGGTATTTTATGAATAAAACAATAGACTCTAAAAATAAACCCTTAAGTATAAATGATATTACCATTATTGATGATAGTAAGTTAAAAAAAGCGATAACCGCAGCAGCACTCGGGAACGCTATGGAATGGTTCGATTTTGGGGTTTATGGTTTTTTAGCTTATGTTTTAGGGCAAGTGTTTTTTCCTGATGCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 130897-130441 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFON01000003.1 Gilliamella apicola strain wkB11 wkB11_scaf003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================== ================== 130896 26 100.0 35 .......................... CCGGCATAAAAAAGGCTGAAATTCGTTACAACGAT 130835 26 100.0 35 .......................... CCGGGAATTTTGGATTGATTATTTTTCCGACTTTT 130774 26 100.0 36 .......................... CCGGGAATTTTACTACTGGGTCGCATTCGACAAATT 130712 26 100.0 36 .......................... CCGTTTACAACCTGTAATCGTTCCAGAACATTTATC 130650 26 100.0 36 .......................... CCGTGTTGTGCCTAAGTGCGCAGTCGATATAAATGC 130588 26 100.0 35 .......................... CCGAGTTGCTCAACAAGTAAAAAAATTAACTTATC 130527 26 100.0 35 .......................... CCGAGGTGATAAGATTTAATTCTTATTCATTAACT 130466 26 96.2 0 .C........................ | ========== ====== ====== ====== ========================== ==================================== ================== 8 26 99.5 36 GTGTTCCCTGTATACACAGGGATAAA # Left flank : TCCCAAATCACCTGTTGATTGCGAACGGCGATCTTCAATATTATCACTCTCTCTTTGGTCTCTCCAACGCATAGTAATTATCTCATCAGTTTTGGTAAGTTTATTTTAAAGGATAATAGAAAAGGATACTAGGTTAAAGTTTCTACAATTTTGGTGTGATTTTGATTTTATGCGTATTACGTTTTGAGCATAAAAATTATTGTTAGTCTAAAGATTAACCCTTACGAAAGTAAAACCGATTCCTTATTAAAAGGTCGGAAACTATAACCATAAAAAAATCGGTAAGAATTAATATTTTTTTATCTAACTATTGTTTAATTTACGTATCATGATGAATTTACATTAAAAATTGGTACATTTTGGTAAAACGACATAAATTAAAGTAATCTTACTTATAGTATATTAAAAATCAATAAGTTAAAAATCTTTAAAAATTTAAAAAATCTGGTAGAATTTATCGGTCGCTATAACTGTAAATAAAACAGATAGCTACAATTAGA # Right flank : TTCTAAACAGCATTAGTTAGCGTTGTTTTAAAATAGTCATGATTGGATGCAGCAAGCTTTAAATTCTTTTGTGGTTAGGTTTTGGACGTTTTAGTCTTTAGTGACACTAAAATGAATGTAGTGTTCACGTCCGAGTAAAGGAAATTTAGCGTGAAATTTCCTTTACAATCCTAAGTTTGCCGCCAGAAGTACTGGTCACTGCGTGACTGCCCTCGCTTTGTTAATTAGCATTAAACGAACCGATGAGTATTGCACTTCCTTGTGCGCCCTCATCTCATTTGGCATCCTGCCCAATGTTCTATGCTAATTAACTCACTCGGCAGTACTTAAGCGGAAATACAAATTCAATGATTTAATTAGATTTTTAACATCATTAATAAAAATTTATTGTCTATCCACTTAATAATTGTTTGTGCTAATTCCGTGCCATACAAAGTGCTGACAACTAAGGCTGGTTAGCAAGTCAAACAAGGCGGTTTGGCAAGTTCGTGTTTTGTTTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 149711-149563 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFON01000005.1 Gilliamella apicola strain wkB11 wkB11_scaf005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =================================== ================== 149710 26 100.0 35 .......................... CCATAGCAGGGCGTCCTAATGCTGGAAAATCAAGC 149649 26 100.0 35 .......................... CCGACAGAAAAATACGAGATCGCTAAAGTCAAAAT 149588 26 88.5 0 .......................CCC | ========== ====== ====== ====== ========================== =================================== ================== 3 26 96.2 36 GTGTTCCCTGTATACACAGGGATAAA # Left flank : CTATTTGAAGAAGAAAAGCAACAACAAAAAGCGCTTATTGAAGCGGGATTAGATAAACTTGGCATCACCGAGCCTTATCAGCGAGACTTTGCCATGAAAAAAGTGGACGAAGCGCACGAACATGTCAAAAGCAACTGGCAACTAGAAAAAGAAGAGCGCATTAAACCGTTATTCTGTATTAAACAATCGATAGTAATTCAGAGGATAATAAACCTTGTATGATCGTAATTGTGTAAAAAACACACCATAAATAAGTAGGGCAAAGCTCACGCTAATACGAAAGTAAAAGACAATATTTTTTGTTTAGGTACATTCGAATATTTATATCTTTTTGAATTTAAATTAAAAATTGGTGTTTCTTGGTGGAACGATAGAAATTGGAAAAAGCCTACTTACGACTTATTAAAAATCAATAAGTTAAAAATCTTTAAAAATTTAAAAAATCTGGTAGAATTTGTTGGTCGCTATAGCTGTAAATAAAACAGATAGCTACAATTAGA # Right flank : CCTTTATCTTAATGCTAAAACCCTAACCCCACTTAATTGATAAAATTTTAAGTGGGGCTTAAAAGCAGCAACCTAAAAAAACATGACTCACTAAGCTTATCTTAAATTTCAATAAATTAAGTTTAATTAAATATTGCAAATTATGTAAAAACCGTGTAATTTTATGCCTGATTTTAGTTATCATTATTGATTATTAAAATTACCGATAAAAACAGATAAATATAACAAAACTAAATAAAAATAAGTAGCAAGGTAATAAAGGAAAAAAATGGTAAAACATTTAGATAAAATCATCGAACAAGCAGGACAAGCAGGACAAGCAGGACAAGCAGGACAAGCAGGACAAGCAGGACAAACAGGGAAAGACTTGCTTAGCCAATTAACAAATAAAGTTAGTCACAACCGTTATACACTAACCATTGATGAACTCAGCGCTCCTATATCGGTGTTAAACGTCAAAGGCGAAGAGGCCTTAAACCAGCTGTGGCATTACACCATTA # Questionable array : NO Score: 5.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.17%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTATACACGGGGATAAA with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1292-654 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFON01000008.1 Gilliamella apicola strain wkB11 wkB11_scaf008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================== ================== 1291 26 100.0 35 .......................... CCGGCGTTACAAGCTAACTCTGCGCTAGTTGAATT 1230 26 100.0 35 .......................... CCGAGGGTTTATTAACTGGCTTACAGGTTGACGTG 1169 26 100.0 35 .......................... CCGAGTCCATTATTGATTTATATTCTTTTTGAGCA 1108 26 100.0 35 .......................... CCGCATTGTGCAGCCTGCATTTGTACAACCGAGTA 1047 26 100.0 35 .......................... CCGCGGAACCACATAAGCGGCAGGTAATTTTAAAA 986 26 100.0 36 .......................... CCGCCCACAGGATGCTATTGTTAAGCTAATTCCTGC 924 26 100.0 35 .......................... CCGTAGTTAACGATTATAAGGAGTGAATAATGGAA 863 26 100.0 35 .......................... CCGCTGAATATGAAGCTGCGGAAGATAAAAATGCT 802 26 100.0 36 .......................... CCGCTCTTTCTTCATTTTTGAGAATTCCGCATTTTC 740 26 100.0 35 .......................... CCGGAAAAAATGGTTTTACACGTGGTAATCCACAA 679 26 88.5 0 .......................CCC | ========== ====== ====== ====== ========================== ==================================== ================== 11 26 99.0 35 GTGTTCCCTGTATACACAGGGATAAA # Left flank : ACATGGGTATAACTGTTTTAGAGGATAAAAAAAAAGTAATTTCCTATAGTCATGATGAATTATTGGAAAATCACTATTATACAAAGTCTTCAGAAAAAGTTGTTAACTTATTAAATAAGCCAGATATAAAATCTTCTATTATCATGACACTACCGAATAAAACTGATGTGATCAAGTTATATTCGAAATTTATTGATAGAGAAAAAAAACAAGAATGGTTATATGTTGGTTTAGCTAATGATAGAACTACAACGGGGTATATACATCTTAGCCAATTAGAATTTAAGGATAAACATTTCTAATAAATTGTTGTAGTTATAGGCTAGCGATAGATATTAAAGCAATTTTAGGGGGGATTTCCCCATGACACTGGTCAGGTTTTAAAACGATAGAAGAGAAGGCAACGGTAGGCGAATTATCTGATAAAATCAGCAAAAATAACGNNNNNNNNNNTTTGTTGGTCGCTATAACTGTAAATAAAACAGATAGCTACAATTAGA # Right flank : CCCTTTATCTTAATGCTAAAACCCTAACCCCACTTAATTGATAAAATTTTAAGTGGGGCTTAAAAGCAGCAACCTAAAAAAACATGACTCACTAAGCTTATCTTAAATTTCAATAAATTAAGTTTAATTAAATATTGCAAATTATGTAAAAATAGTGTAATTTTCATGCCCAATTTTAATTATCATTATTGATTATTAAAATTACCGATAAAAACAGACAAATATGACAAAACTAAATAAAAATAAGTAGCAAGGTAGTATAGGTAAGGATGTCTCGGTTGTTAGTATATCAAATGCCCACATTATGCAGCATGATATTCATTCATTTGCATTGGTTTATTCACAATAAATTTGATTATTGTCCCTTACGGTTTGGTTTTCTAATAAAAACAAAGCAATCACGCTATCAATGTAACAATCCTCAACGCCAGATTTATGGCTATCTATTCATGCCCCCCTTAAAACAACTAATCATTAATCCATTTAATGGGGTAAAACGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGTATACACAGGGATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTGTTCCCCGTATACACGGGGATAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //