Array 1 92984-90377 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMZI01000161.1 Pelosinus sp. HCF1 HCF1draft_170, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 92983 32 100.0 35 ................................ AGCGGAAGCAACTTACCAAATAACGGAGACACAGC 92916 32 100.0 35 ................................ TTGGGATAGTAACGTCTCTAGAAGCTCCGCTTTAC 92849 32 100.0 34 ................................ ATTTAGACATCTAAGTGGCAGCTATTTATTAAAG 92783 32 100.0 35 ................................ CGAATATCTTTGTCTGCCACTGCTAATGCTAAGGC 92716 32 100.0 35 ................................ TATAGTAACTCCGTTTGTTGTCTCTGAGCTTCCTG 92649 32 100.0 36 ................................ CATATTATGGGGAGCCTTGAATTTCTTTTGCATAGC 92581 32 100.0 33 ................................ GCTCCGCTGTTTGATCCTGTGTCATTCGAGCTG 92516 32 100.0 34 ................................ TATGATTGGCGCTAACTCGGAGGCTTGGTATGCT 92450 32 100.0 33 ................................ AAATAGCCAGTATACAGTCCGTTATCAGACGTA 92385 32 100.0 34 ................................ ATCTGTAAAGCTACCGTTGTCATGGAGTGTCGTA 92319 32 100.0 34 ................................ TAAGTCCTCTCATGCCAATACCAATATGCCTGAG 92253 32 100.0 34 ................................ TAGAGCTAGACATTGTTCTATCAAACATTTCTTT 92187 32 100.0 35 ................................ AATTCACCAGTGCCGGCTTCAGCATCATTAACTTC 92120 32 100.0 36 ................................ ATCGTCTATGAAATCAAACAACGTAGGTGTATCAAT 92052 32 100.0 33 ................................ TGTCTGATGTGTTGACCATGCGTTATTTCTTAG 91987 32 100.0 32 ................................ TTATTGTTTTGGCTAACACCGTTGGCGTATTG 91923 32 100.0 33 ................................ TGTTCACCAGTTAACTGGTCTATGTATTCTTCG 91858 32 100.0 36 ................................ ATCATCTGCATTGTCAATAAATGCAGTTTCAACCAG 91790 32 100.0 33 ................................ ATTAGAAGTTGCTTTTTGGATAGCTTTGCAACT 91725 32 100.0 34 ................................ CCTTAGTAATTGCCAAGGTGACGGTGTGAGCTTC 91659 32 100.0 33 ................................ ACAGAAGAAGAAAAGGAAATGCTTGAAAACTGG 91594 32 100.0 33 ................................ TCAAATCTGCACCTCTAAAGATATAAGTCTTGC 91529 32 100.0 34 ................................ AATGTCACATGAGTAACCTCTATAATTCGCCATT 91463 32 100.0 34 ................................ ATTGTTCGTCACTCCGTTTACCTATGATACACAT 91397 32 100.0 34 ................................ CATTTTGATCATTTATTAGGGGCTAAACCCCATT 91331 32 100.0 35 ................................ TTATTAACTCTGTAGCCAACCATATTTGTTTTACC 91264 32 100.0 34 ................................ TGCCAAAAACGAGCCGAATTGCTGGCAGGTGAAC 91198 32 100.0 35 ................................ TCACCAAGACTAGCTTTGCCAATAGCCTGTATACT 91131 32 100.0 32 ................................ ACGTATTTGAAATTCAAGGTTTAGACCACCAA 91067 32 100.0 33 ................................ CAACTGAGTTGATGCTGTTTTTAAGTCCTGTTT 91002 32 100.0 32 ................................ ACGTATCTTAAAGCGATTGAAGCTCTACTACG 90938 32 100.0 33 ................................ AATTAAACAATATTTTATAGAGCGATTTATTAA 90873 32 100.0 33 ................................ AGATCTTCGGCAGCCAGTATAAAAGAGGAGTTG 90808 32 100.0 35 ................................ ATAGGTTTTATTTGTGACTACATCCATTCGTGCAA 90741 32 100.0 34 ................................ ATAATTAAAGATAATGAAAAACCTGAGCATAAGC 90675 32 100.0 35 ................................ ATGTAAAACTTGTTAGGGGTTACATTTCCTTTATT 90608 32 100.0 34 ................................ CCCATTGTAAGGTATTTCCTTGTGCCACTTTTCT 90542 32 100.0 35 ................................ GGATTATGGACCAATATGAAAGTTAACTATCAATC 90475 32 100.0 35 ................................ CGTTTTTCGGGTTTCAACATCAACCCTCTGGTAGA 90408 32 90.6 0 ......................A...CA.... | ========== ====== ====== ====== ================================ ==================================== ================== 40 32 99.8 34 GTCACGCCTTGCGTAGGCGTGTGGATTGAAAC # Left flank : TTTAGAAGATTATCCGCCATTTTTCTGGAAATGAGGGTTTGGCAATGATGGTATTAATTACTTATGATGTAAGTGTGACCACCGATTCGGGAAAGAAACGTCTTCGCAGAGTAGCGAAACAATGTGTAAATTATGGTCAACGTGTTCAAAACTCAGTTTTTGAATGTTTACTTGACCCAGCGCAGTTTGCAGAGTTAAAGCATCGCTTGGAAAGCATAATCAATCATGAGACGGATAGCCTGCGATATTATTTCTTAGGAAGCAACTGGAAAAATCGCGTAGAGCATGTGGGTGCGAAATCAGGATATGATCCAGAAGGAGTTCTGATGATCTAATGCGAACCCTAAGTGCTCATCGTTTTCCTGGGGCATTCGCAGTCTAGAAGGTACAAGCCTTCTTGATGTTTATATAAGGAAAATCTTTTTAAAAATCGATATAATTTTCTAGTTCGCGAAATCATGTGTTTTGACCCATGGTTTTCTTATATCCCACAATTGCCA # Right flank : TGAGGTGGAATCTCATCCTATCTCCGAATGCTTGGTGTTTATCCAAAGCAGTTGGAGTTATAGAAGAAGAAATGGGAACATACTGTATGGAATGATTAAAGAGGCAAAGAGGAGCTTTGTGAGTACCATTATATTGCCGAGGGAGAAGTCTTAAAAATAAAAGATACATTATGTGTCAAAGAACAAAAAACTTACAAAGTTGAGGGATCATAATGATATTTGTAAAACATACCCCTAATCATGCAGGTGTGGCTATATATGGTGATTGTTTAGATTTTGAGGAACTTTATGGTGCACTGCATGATGTTGTTGGTAAGGAGAATCAATATGTTGCCTACCAAGGTGTTCGTATAAGAGTGTTAGGGTTCTGCTATGAGCTGCGCCATGCTTTAATGGGGAATCGGGAATTTGAATTTGTTGAGAATGGTATGGATGAGAATCGGATGAAAGAGTTAGCAATGATTACTCCTAAGAAAAATATATATATAGGCACTCATATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCTTGCGTAGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 2 106350-104723 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMZI01000161.1 Pelosinus sp. HCF1 HCF1draft_170, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 106349 33 100.0 34 ................................. GTGTGTCTTGGGTAAATCGAAATAAACTGTATTC 106282 33 100.0 33 ................................. CACGGTGCAGGAGTAGCTTTGTCTACCCTGTCC 106216 33 100.0 33 ................................. AGCAACTTAGCCTTAACAGTAAAAGGCACATAT 106150 33 100.0 32 ................................. TGCTAAAGGGGGTTAGTGATTGCCTAAACAAT 106085 33 100.0 33 ................................. TATGATTGGTAAACAGAATGTATCAGCTACTAA 106019 33 100.0 34 ................................. TTTAACTCGGCAATCTGCTTTGCTACTGAATCAA 105952 33 100.0 33 ................................. GATCACCTCTTTGTATCTGCCACAAGTACAATT 105886 33 100.0 33 ................................. AGCAAGCTCACTATTTGTAAACTGATCCAGCTT 105820 33 100.0 34 ................................. ATTCTTCCAACACCAAACCCGACTAATTTATTTC 105753 33 100.0 33 ................................. TCATTGGCAGGTATCATTAACGAATAGTCGCCA 105687 33 100.0 34 ................................. TCTTTGTGACGCTACATCGGCGAGTACTCCAACA 105620 33 100.0 33 ................................. TACTGTCGTTACTAGCCTAGTTTCTTTGGCTGG 105554 33 100.0 35 ................................. CATCTTTTTACTTAACCAGCTAAACATCCTCAACA 105486 33 100.0 33 ................................. ATCATCAGCGGGTTTACTACGCTCCCAAATAAA 105420 33 100.0 36 ................................. AATCACGGTTACATGTGTCATTTTGCGTTGCTTAAC 105351 33 100.0 33 ................................. ATCGTCTGGGTTATCAGTGCTTTGGCAGCAATC 105285 33 100.0 35 ................................. AATCGTTATCCATTAAAGAGCAAATATTGGATGAT 105217 33 100.0 33 ................................. CATTATGCTTGTCCCTCCTGTTTCACGCCTTGT 105151 33 100.0 33 ................................. GCAGTACTGCGTGACACAGATTGCCCAGCGGTA 105085 33 100.0 33 ................................. AATGACGTTATCGCTGTTTGTAAAGGTTTAACT 105019 33 100.0 36 ................................. CGGTAGTTATGGCTACTGGATTTATCGCGTAGTCTC 104950 33 100.0 32 ................................. TTGACGATGGACCGCAAATAAAACATTATTTC 104885 33 100.0 33 ................................. TTTGACCACTTAGCCGCCTTTAGTTTCATGGTG 104819 32 97.0 33 ...............-................. GCTTTCATGATAGCCGCAATCATTGGACTCTGA 104754 32 87.9 0 ...............-.....A.........CT | ========== ====== ====== ====== ================================= ==================================== ================== 25 33 99.4 34 GTCACGCCTTGCGTATGGCGTGTGGATTGAAAC # Left flank : ACAGGTTCACTTTCCTAAAGTTCAACTTGAAAAAGGTACAGCAGCCTATGTGCTTCATCGTTCGACGGAAAAAGTAGGACAATTCTTCTTTTATGAAAAATACCAGGATCAGCAAGCGTTAGATTATCATGGGTCTACGCCTTACTTAAAAGAATTATTCAGCAGTATTGCTGATCTGCTTCTCGAAAAACCAGAAGTTAAACTATATGAAGAAGTGGCAGCCATTTCCCGATAAGTAACGTAGAATAGTGAAAAGTTCCTGCAAAGTAATGTTCTTTGCAGGAACTTTGTCTTTTAATGGGAAATAATGAGGTAATATGGGAAAGTCTCCTAATGCGAACCCTAAGTGCTCATCATTTTTGTAGGAGATTCGCAAACCAGATATAAGAAGGCGTTTGACCACTTCTTATATCAAAATTCTCTATTTAAATAAAGCACATTTCGGGGTTCGCAAAATCATAGGATTCAACCCAGGTAGTTATTGCATCTCACAATCGCCA # Right flank : CAATCAATAGCACATTGTTATTGAGATCTGAAAATAGGTAAAAAAAGAACCTTCAGTGTAAACTGAAAGGCTCCTATATTTAGTCATAATGTCCTCTGCATTGTACGATTTCAATGACTTCATCCTCAACCTTATAGATGAGTCGATGTTCAGTGGTAATTCTTCTGCTCCAGTAGCCACTCAAATCATTTTTAAGGGGCTCGGGTTTTCCTATCCCTTCATTGTAGTTACGGTCAATATCCTTAAGGAGTTCATTGATCTTCTTAAGAACCTTTTTATCAGTAGACTGCCAGTAAAGGTAATCATCCCATGCGTTATCCGAGAAAATCTTATTCATCCTCTATAAGTTCCCTGATTTTACCTTTACCAGCCTTTAATTGGGCAATGGACTCCAGAAGTCTGTCATAGGTCTTCTTATTGCTTCTGATATAAAGATTTTCCATAAGATTGTTATACTCATCCTCTGAGATCATAACGACATTTCCACCTTGTTTGCGGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCTTGCGTATGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA //