Array 1 210567-208803 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHLK01000006.1 Paenibacillus sp. N10 scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 210566 32 100.0 37 ................................ TAAAGGTCGTTATTACCATAAGGATCGGCTTCATGGA 210497 32 100.0 35 ................................ ATCCCACATACGGAGAAGTTGGTTATAAAACATGG 210430 32 100.0 34 ................................ AGTATTATATCCCTCATCCGGACATTAAGATTAA 210364 32 100.0 34 ................................ AGTTACCCGAATCATAGCCTCACCTTACCCGTGA 210298 32 100.0 36 ................................ CGGTTCCGGCGGATCAGTGTTGGTATCCTCGATCGG 210230 32 100.0 35 ................................ ATCTTGCTAGGGATCGCCATCAGGTATGTCCCTCA 210163 32 100.0 33 ................................ ATCTCCGCATGTTCATTCTAGGTCTCAATGCTT 210098 32 100.0 33 ................................ TTTGTTGACCGGGCTATGACGTTGTTCAACAAC 210033 32 100.0 35 ................................ ACAAAGCTCAGAACATGCCTTGTACTGTGCAACAA 209966 32 100.0 34 ................................ TTTTGTTACGGTCGTAAAGATCGCCTTTGTTGTA 209900 32 100.0 35 ................................ ATAATTAACTGATGGACGATGTTGTTTTGATCATC 209833 32 100.0 33 ................................ AGGATACCTCCACGGCTCTAGCTGTATTTGCTC 209768 32 100.0 36 ................................ CGGTCTGATCGGGACCATGTCCACACTACCACCATA 209700 32 100.0 34 ................................ ATATGGCACAGTTGAATGGTTTACCTAAAGTACA 209634 32 100.0 34 ................................ AGGTGTCTGAATCAATTACGGTGAAATACAAGAC 209568 32 100.0 33 ................................ TCTTTGAGTTCTCTGTCTTTGGATGCTTAAGAT 209503 32 100.0 34 ................................ TCGATGTCATTAGCATCCAAATCCAAATCCGCAT 209437 32 100.0 37 ................................ CCGGACTCATTGCCGCCAATACAGGTACAAATCCGTG 209368 32 100.0 35 ................................ TCGGCGCCTACACATTTACGATGGCGACCGGGATT 209301 32 100.0 34 ................................ CAAGGCACCGGAGGGATTCTTTTCCGCTAACTCG 209235 32 100.0 35 ................................ TTGCGGATGACAAAGAACCAGAGGCCCAGGATAAC 209168 32 100.0 33 ................................ ATGAGCGTTGTGCCATCATCGGTTGTAAAGGAC 209103 32 100.0 33 ................................ TTAATATGCATAAAATCTTTACCAATCTTTTTG 209038 32 100.0 35 ................................ ATCCGGCATAACGGTCATTACTGGATAGTTTCTGA 208971 32 93.8 38 ...........C.............A...... TAAATAATGACAAGCCCTTTATCATAAAGGTCAATCAC 208901 32 100.0 35 ................................ AGCCACGCGATATTTTTCTCGACCCGTACTTTCTC 208834 32 87.5 0 .......T....................T.GC | ========== ====== ====== ====== ================================ ====================================== ================== 27 32 99.3 35 GTCGCACCCTGTATGGGTGCGTGGATTGAAAT # Left flank : CCGCCTTTCCTCTGGAAGTAGGTGCAGCTTATGCTTGTTCTAATTACGTATGATGTAAGCACGACCAGCGGCTCGGGACAGCGGAGGTTGCGCAAAGTATCAAAAATATGCCAAAATTATGGTCAGCGGGTACAGCATTCTGTATTCGAATGCATCGTTGATTCCACGCAGTTTGCCGTTCTCAAATTGAAATTGATCGAAGTTATTGACCCAGAAAAAGACAGTCTGAGGTTTTATCAGCTGGGCAATAATTATAGAAATAAGGTAGAGCACGTCGGCATAAAAGAATCCTTGGACTTGGAAGGGCCTTTAATTATGTAGTGCGAATGTCTAGCAAACATGATTTCCCTGGGGGATTCGCACCATTAATAATACTTTTTGATGAAAAATTTACAAAAAAAGTAAACTAAAATTAGCTGTATTAGAGTGTTATTAAATTATTTTGTTATGATTACTAGCTGGAAAGCCGTTTTCTGAGATGTTTTTGCTTGAAAAACGGA # Right flank : TTGATAAAGAAAGATGATAGCTAAATAAAATTTGACTGGTCAGCATGAAATCGACGACAAAATCAAAATATGTTAAAATAAGGAAAAAGGTATAAAGAGAGGTGTATCAATGGAGATCGATTGGTATAAGTTGATATTATGGATTACACTTGCATTTATTAATATTGGTTTTGCGGAAATTAAAAACATGAACAAAACTTTCTGGTTTATTATCTCTCTAATAATTGGCCCCATAGCAACAATTGCTATTGTAACCAATAAAAACGATAACGTTAAAGGTCGTTAGAGAATTAGCAAATTGGTATTATCCCCTTCTAGTAGACACCGCAAAAAAGTCCGCCCGGTACTATTTGGATTGAGGAACTTGGAGGGGATATTGCTATGGCCAAAAAAGGGCAGATTTCAAACCTTTGGAGAAGAGTATAAAAGGCAAGTGGTAAAGACTTATTTAAAGGGGAAAGATGGCTGCATTAAGATTTCAACCCAAATTCTAGGAATGG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTGTATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTGTACGGGTGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 219839-219003 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHLK01000006.1 Paenibacillus sp. N10 scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 219838 32 100.0 36 ................................ ACAAATGTTCCCGAGTCGCTTATTCAAACTCTTAAA 219770 32 100.0 35 ................................ CATTACTCTCCTTTGTCATCTTGTCGTAGGTCTTA 219703 32 100.0 35 ................................ AATACCAATGCCGCCGCATCCTATGACCTGATGCA 219636 32 100.0 33 ................................ TATGACAACGCCTACTCCGCATGCAGGAGCGTT 219571 32 96.9 36 .............T.................. AAGGATGCTTCCGATCTTTCGAAAGTCGCCGCCCTC 219503 32 96.9 37 .............T.................. ACGATGGCGAAGTATATCTCCATCAAGCGCCCATCTT 219434 32 96.9 37 .............T.................. TAAGGAAACATATTCGTCCTTCCCCATTTTAGCCAGC 219365 32 96.9 33 .............T.................. TTTAATACCGGCATCACGTTTTTTGTCTTTTTT 219300 32 96.9 37 .............T.................. TCCGGGATCGGTGGCATGGGGTACGGCCTCATGCGAG 219231 32 100.0 35 ................................ TTGGAGGCATTTATGGCTAATTACTTGGTCGGTAA 219164 32 93.8 37 ...............T...T............ TGAAAGAGCAAGGGAAGATCATTACCAAAATTTCAAG 219095 31 84.4 29 ...A..............T....A...-.T.. AAAAAAAGTACCCGTATGTTTTTCTTAGT T [219066] 219034 32 81.2 0 .AT..........T.A.......T.......A | ========== ====== ====== ====== ================================ ===================================== ================== 13 32 95.7 35 GTCGCACCTTACACAGGTGCGTGGATTGAAAT # Left flank : GCAGGGGACGCATCAGGATTTGCTGGCACGGGGCGGGTATTATGCGCAGTTGTATGGGTAGGTTGATTAGGGATCTTTTACTATGAGCATTGGAACGCAAGACCAGAAAACAGGGAGTCCGGGTGACTTTCTGTTTTTCTGTTTGGGAACTTCTTTTTGGGAACTTTTTTTGGAAAAATAGATTGGAAGAATTCTTGCGGGGATATAACCCGATGGAAGAGAAGTAGGATAGCAGAGTTGATTAAACCGTTAGAATATGGGAAAATCAGGGATGATCCTCGAGTAACTTTATTTTCAAATTCGGGAACAGGGGCACCTTCATATTATTGTAGTGCGAATGCCAAGCGAACATGATTTTCCTGAGGGATTCGCACCAAATATTTTACTTTTTGAGATTGGTTTTACAAATATAGCAATTTGTTATTTTGTTTATTTGAGAGAATTTAAACATATTTTTAGTAAAAGGTTCGATTTTTAAGTTTTTTTGCTTGAAAATCGGT # Right flank : GTTCCTTTTCATCAGCACGTCTCAATACCGGTCTATTCCACAACAAAATCTTCTTCGCAACTTCGCGAAGAGGATTTTTTGCGTTAAAACAGTTTCAAAACTGCTCATAAAACATTCCCAATTCAAATGACCCAAAAAAATTATCGAAATATGTATATTTTAGGAAGGAACTATAATGAGTCTGTAGAATTACTTTATGGAAGGTTTAGTAAAATTATTAGGTATATGGAACTACTTCTTAGGTGTGCAGTGATTTTTTTGAGGAGGAGGTGACATCATGAATTATATTGCCCATATTCGTGAAAGCGATGAGGAGCAGCAGAGCGTAGAAGAGCATCTACTCGGCGTACAATCTCTTGCTGAAGATTTCGGTGCTGGTATAGGTCTCAAACACATTTGTGGATTGGCTGGTCTGCTGCATGATATGGGGAAATACACGAGTGCTTTTCGTAATTACATTCTGGAAGCGGTATACAACCCCGAAGCTCCGCCGAAACGGG # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACACAGGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACCTTACATAGGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 222244-221138 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHLK01000006.1 Paenibacillus sp. N10 scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 222243 32 100.0 33 ................................ TCCCCACGCCCGCCCCTGCGTTGTGGCTCTCTT 222178 32 100.0 35 ................................ AATAGTGACATGAAGGCCACATATGACAGCTACAA 222111 32 100.0 38 ................................ AACTAGTGCCAGGGCATCGTATGAGAAAGGGAGTCCAA 222041 32 100.0 35 ................................ TCGTTCCCGGTGCAGTGGTACATCGACAACATGAA 221974 32 100.0 34 ................................ ACGAAGGAGATCCGCGGGCATGGGCACAGGCTAT 221908 32 100.0 34 ................................ AAAAGTCTATCCAACCTAGTCAACAATCAGGGCC 221842 32 100.0 37 ................................ ACTTCCAAGTATCCCACCTGGTATCAACCAAATCGGG 221773 32 100.0 34 ................................ CTCAATATGCTGGGAAAATCAATCATGTAACCAA 221707 32 100.0 35 ................................ CAATCGTGGGTATGGTGGAGATCGCTAACGATACA 221640 32 100.0 35 ................................ ACTAAATAGGTAATAAGTTCCACCTTGGGTACACG 221573 32 96.9 35 ....................T........... TCAATGTCCATCGTGTCCGACTCGACCAGGGCATA 221506 32 100.0 39 ................................ TCTGCATCGTTTTATCTTATGGTTAATAAGGTTGATCAA 221435 32 100.0 34 ................................ ATTGATGGTGTAGACACCCATTTCAATCATCATC 221369 32 100.0 35 ................................ AATATCGCATTACTACGGCTTCGGTGATTGATCTG 221302 32 93.8 36 ....T.........T................. TTTGATGGATGCATAGTAAGCGACAGGAAGTTCATA 221234 32 96.9 33 .......................A........ GACCAGAACGGCAGCATTAAATCAATGGCCGAA 221169 32 87.5 0 ...........CAC....C............. | ========== ====== ====== ====== ================================ ======================================= ================== 17 32 98.5 35 GTCGCACCTTATGTAGGTGCGTGGATTGAAAT # Left flank : TTCCATCACCGTAGTGAAACTAGGGAAAAACATAGTAGAGTAAGGGGCGAATCAGGATTTGCTGGCACGGGGTGGGTATTATGCGCAGTTGTATGGGTAGGTTGATTAGGGATCTTTTACAATGAGCAATGGAACGAAAGATAAGTAAGCGAGGGGTCTGAGTGGCTTCCTATTATTCTGTTTGAAAACTTCTACATAGATTCGGCGGGATATAACCCGAAGAGAAATACGATAGCAGAGTTGATTAAAGTAATATAATATGGGGAAATCAGGAATGACCTTACATAACTTTCTTTTTAGTTCGAGAACATGGGCAGCTTCCTGTTATTGTAGTGCGAATGCCAAGCGAACATGATTTCCCTGGGGGTTTCGCACCAAATATTTTACTTTTTGATATTGATTTTACAAATATAGTAATTCATTATTTTGTTTATTTGTGTAAGTTTGTAGTTGCTTTTAGTAGAAGGTCCGATTTTTAAGTTTTTTGCTTGAAAATCGGT # Right flank : ACCGGCGAGTCTGGGGCAAAAACGCCGTTTTAGACGTCGAACCTTATGCGCAGAATTCATTAGCCGGCGCACAGCGGATTCAAGAAATTTTGAACGAAGAAGAAGAGCCGGTAAGGATCGGTACTTGGGACAGCAAACAGGTGTCGGAGGCCATGGTGGAATTCCGCAACGTCGAATTTTCCTACCAGTCGGATAAAAAAGTGCTGTGCGAGTTGTCCATGAAGGTGCTGCCCGGCCAGGTTGCCGCCATTGTAGGAGCCAGCGGAAGCGGCAAGAGCACGCTGATCAAACTGCTCCTTGGTTTCTATCCCGTAGACCGCGGTGAAATCCTGCTGCAAGGCAAGTCGTTCGGGCACTACACGCTCGAAGAAATTCGCGGGCAAATCGCTTATGTGCCGCAAGATGCCTTCTTATTCAGCGGAACCATCGAAGACAACATCCGCTACGGCAATCCGGAAGCGTCGACAGAGGAAGTGCGGGAGGCGGCCGGGGCTGCATAC # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 225991-224621 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHLK01000006.1 Paenibacillus sp. N10 scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 225990 32 100.0 35 ................................ CTCTTGACCCTAAGATGTACCCGGACCTGTCCATT 225923 32 100.0 33 ................................ AATCAATGCGGGCGCCAGTTTCGGCATGTTATC 225858 32 100.0 35 ................................ ATAACTAACTGATGGACGATGTTGTTTTGATCATC 225791 32 100.0 34 ................................ TCGGAAAGAGGGCGAAGTAATGTTACCTAAACCG 225725 32 100.0 35 ................................ AGGGGCAGATACAGTCCCGGGAACTACGGCAGGAT 225658 32 100.0 34 ................................ CAACATGTCTCGCGAGGAGCAACGCAAACTGAGG 225592 32 100.0 33 ................................ TGGAAGCACAAAAGACCTGTCCTCTGCCCAAGC 225527 32 100.0 35 ................................ GAATGAATCCACCTCAAAGGTGCCACAAGGCAGCC 225460 32 100.0 37 ................................ GCCCTGATCATCAAGTCTTATACTGGGCGAAGTTGAT 225391 31 96.9 37 ..............-................. AATTTGATTTTGAAGAATAATGACAGTGAACATTATT 225323 32 100.0 36 ................................ TCACCAATGGCCCGATCTATGTTAACCCTGCACCCA 225255 32 100.0 34 ................................ TTTAACATCGATCCGATCGGCTTGTATTGATTTC 225189 32 100.0 36 ................................ AGCAAGGGTTTGAGTAACCATCATGTTACCTAAGTT 225121 32 100.0 36 ................................ CGAAAAGAAGCCACACGAAGCCGTCGAACAAAGAAG 225053 32 100.0 35 ................................ GCGAAGGCTCTAGAAACAAAATGAATACGAGGTGG 224986 32 100.0 33 ................................ TCCCGGCAAACGTCAGGATAAAGCGATGATCGC 224921 32 96.9 36 ............A................... GATGTACACCGGAGACTCACTCCTGTCTGCTTGTAT 224853 32 96.9 34 ............A................... AGCCCCGCCAGAATCTCGGCTCCTGTCATAGTCA 224787 32 96.9 35 ............A................... GTAACATACTTACAGAGCCAAGGACTCATTCAGGC 224720 32 93.8 36 ............A.....A............. ACGGTACTCTGCATCTGTTTCTTTTTCTCGGCCTCC 224652 32 81.2 0 ...A.....A..A.....A.C..A........ | ========== ====== ====== ====== ================================ ===================================== ================== 21 32 98.2 35 GTCGCACCTTACGTAGGTGCGTGGATTGAAAT # Left flank : AAGCATAGTGGAGCAGGGAACGCATCAGGATTTGCTGGCACGGGGCGGGTATTATGCGCAGTTGTATGGGTAAGTTGATTGATTAGGGATTTATATGATAAGCATTGGAACGCAAGACCAGAAAACAGGGAGTCCGGGTGACTTTCTGTTTTTCTGTTTGGGAACTTTTTTTGGAAAAATAGATTAGAAGAATTTCTTGTCGGGATATAACCCGATGGAAGAAAAGCAGGATAGCAGAGTTGATTAAATCGTTAGAATATGGGAAAATCAGGATGATTATTGAGTAACTTTATTTTTAGTTCGAGAACATGGGCAGCTTCACATTATAGTAGTGCGAATGCCAAGCGAACATGATTTCCCTAGGGGATTCGCACCAAATCTTTTACTTTTTGAGATTGATTTTACAAATATAGTAATTTGATATTTTGTTTATTTGTGTAAGTTTGTAGTTGTTTTTAGTAGAAGGTTCGATTTTTAAGTTTTTTTGCTTGAAAATCGGT # Right flank : TGCTATTGTTATGGTTGTTGACAAAATTTATATGGTCACACCTTTAAAAGGTGCTTGGATTAGTGACTCTAAAAGAGGGTGCTAGTAGTTTGGAATGAACAGCGTGGCTGCATTTGCTTTCCTGCAGATCAATTTGACTCGCGCGCAAAATTCATTAGCCGGAGCACAGCGGGTTCAAGACAGTCATGAATTAGAGAAATATAGTCGAGCAAAATACGCAACAGTATTTGATGGCATGCGGCTTGTATTAGGCGCAGTTGTATGGAAAGGTTGATCAGAGATTTTTTTGCGATGAACAATGAAACGATAAATTAAAAAACAGGGAGTCTGGGTGACTTCCTGTTTTTCTGTGGTAGACCCTTCAAGAACATGTTTTTGACACATAAAGCTCTGCCCATTCATGTTAATTGGCTTGTTTACGTTTTTCGACTTCTTTGTTTGTGAGATTCCCACACCCCGGCAAATCCGGAGTATTTTTAATTGCAATGTATAGATATCAC # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 229580-228141 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHLK01000006.1 Paenibacillus sp. N10 scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 229579 32 100.0 35 ................................ AGTTTACAGTAATTGTAAACTATTTAACCCTATAA 229512 32 100.0 34 ................................ CCGCAAAGATCCTCGTTACCCCGGTCGTCTGTAA 229446 32 100.0 33 ................................ TTTTCCCACACGGCCGCTAAGGGTGATGTATTA 229381 32 100.0 33 ................................ CATATTTCCATCTCCTTTCCTATTTGTGTAAAA 229316 32 100.0 36 ................................ CCGCCGGTTGTAAAGAACGTCTTCGTCCAACTGCTC 229248 32 100.0 35 ................................ TGACATCTGCATCCCTCCTATATTTTATCGGCCAG 229181 32 100.0 36 ................................ GATCTCACCAAGTGCTGTTGCAGTTTCGGAAGGACC 229113 32 100.0 35 ................................ ACCGGGGACGGAGGCGCAAACACGCCGTTATAGGC 229046 32 100.0 36 ................................ CTGTCACAAATCGACCTTTATACGCGCCGATTTGTC 228978 32 93.8 34 .............C...C.............. ACCGCTACTATAGCCTGCTTGATCCTATTTACCT 228912 32 96.9 38 .............C.................. TCTTCTCGGCGCCAGTATTTCAACCTCTCGTTATACAT 228842 32 96.9 33 .............C.................. ACCACGAGCCATGCGTGTATTTGCATGTCTGAG 228777 32 96.9 34 .............C.................. CTCGGGTCGGTCTCGCATTCAAATTTAATCTGCT 228711 32 96.9 34 .............C.................. TAATCCGTATTTGTCTTGAGCGTATTCTTTCACC 228645 32 96.9 35 ............G................... TCCGAAGTCGAAAATGAAATCGGAAGAAAAACCGA 228578 32 96.9 38 ............G................... AACGGACCGGAGAAGGAAATAAAGACCGGTGTGTCTAG 228508 32 93.8 35 ............G......T............ GGATTGGCGATCTTTGCGAACTAAAAGTGTGGGAA 228441 32 96.9 36 ............G................... TTTACGATGGCTTCGGTCGCTGTTGTTGTTTCCTTC 228373 32 96.9 36 .............A.................. AAGTTGGCTTTTTATGATGAACCCCGGCCGTACCTG 228305 32 96.9 34 .............C.................. CGTTATGAGACATCAATTGTAGCTTATTATCAAA 228239 32 93.8 35 .............C..........T....... CCATCTCTCATATATCCGGCTCTGTTTTCTTCCTG 228172 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 22 32 97.9 35 GTCGCACCTTACATAGGTGCGTGGATTGAAAT # Left flank : GCATAGTGGAGCAGGGGACGCATCAGGATTTGCTGGCACGGGGCGGGTATTATGCGCAGTTGTATGGATAGGTTTATTAGGGATTTATATGATGAGCATTGGAATGAAAAAGATCAGAAAACAGGGAGTCCGGGTGACTTTCTGTTTTTTCTGTTTGGGAACTTCTTTTTGGGAAATTAGATTGGAAGAATTTCATGCCGGGATATAACCCGAGGGAAGAGGAGTAGGATAGAAGAGTTGATTAAAGCGCGAGAATATGGGAAAATCAGGAATGGTTCTTGCGTAACTTTCTTTACAAATTCGAGACCATGGACAGTTTCATATTATTGTAGTGCGAATGCCAAGCGAACATGATTTCCCTGGGGGATTCGCACCATATATTTTACTTTTTGAGATTGATTTTACAAATAAAGTAATTCGTTGTTTTGTTTACTTGAGATAATTTCAACATATTTTTAGTAAAAGGTTCGATTTTCAAGTTTTTTTGCTTGAAAATCGGT # Right flank : ATCGGGGAGTCCGGCGCAAATACGCCGTTATAGGCGTCGGACCTTATGCGCAGAATGCATTAGCCGGCGCACAGCGGATTCAAGAAATTTTGAACGAGGAAGAAGAGCCGGTAAGGATCGGTGCTTGGGACAGCAAACAGGTGTCGGAAGCCATAGTGGAATTCCGCAACGTCGAATTTTCCTACCAGTCGGATAAAAAAGTGCTGTGCAAGTTGTCCATGAAGGTGCTGCCCGGCCAGGTTGCCGCCATTGTAGGAGCCAGCGGAAGCGGCAAGAGCACGCTGATCAAACTGCTCCTTGGTTTCTATCCCGTAGACCGCGGGGAAATTCTGCTGCAAGGCAAGTCGTTCGGGCACTATACGCTCGAAGAAATTCGCGGGCAAATCGCTTATGTGCCGCAAGATGCCTTTTTGTTCAGCGGAACCATCGAAGACAACATCCGCTATGGCAATCCGGAAGCGTCGACAGACGAAGTACGGGAGGGCGGCCTTGGGCTGCCT # Questionable array : NO Score: 8.85 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTACATAGGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACCTTACACAGGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //