Array 1 32170-31149 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUJU01000044.1 Absiella sp. AM27-20 AM27-20.Scaf44, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 32169 32 75.0 35 .AAC...A.T.T......C.A........... ATGGACATCCAACAATAAAACCACAAGCCATTATA 32102 32 96.9 35 .......................T........ GAACAAATAATATCACTTTCATATAGTTTTCCATT 32035 32 96.9 34 .......................T........ TGATTTACAGCCATTCTTTGATAAAGCAATAGAA 31969 32 100.0 34 ................................ TGTTTTTTTTGATGTTCAGCATTTCCATTTTTTC 31903 32 100.0 33 ................................ GGTGTAAGAACTGTATTAAAAGATCTAGGACGA 31838 32 100.0 35 ................................ CAACTAGAGTTGTAGATTTTGATAAAGCAACAAAA 31771 32 100.0 35 ................................ TTTTATTACTGATCACACGTAAAGGTGGAAAAACA 31704 32 100.0 34 ................................ TAAAACTGGATGTCCTTTTGGATATAAGAAAAAT 31638 32 100.0 34 ................................ AAAGAAGTACGAAAATCTGTTATGAAATTAAATT 31572 32 100.0 33 ................................ AAACTAGCAGATGTCTTTGGTGTAACTACTGAT 31507 32 100.0 34 ................................ ATTTTTGCTGTATAATATAAGTGAAGTGAGGTGA 31441 32 100.0 34 ................................ AGGTCAAGGGATTTATGAGAGGAAAAGGCAATAT 31375 32 100.0 33 ................................ ATTGTCTAACATCTTACCAACGTCTGCTCCGTT 31310 32 100.0 33 ................................ TTTCAATACTAAAATTTCGGGTATTTCCATCAA 31245 32 100.0 33 ................................ GGAGATAGTAAGGAAGTTGCACAGGCATTAGAA 31180 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 16 32 98.0 34 ATTGAAATCCACAAGTTCATGAGAAACTTGAC # Left flank : CTTGCCATTTTAAGCAACCGAAAACTTGATTCAGGTCATTGTATCCGCTATAAGAACAAGTATTTTATTCCTATAACGAAATCTGGTAGTAAAGCATATCTGAAAAAAGGTATGAATGTGATGGTGATCGAAGCATTTGATGGAAAGCTATATGCCAACATCCTAGATCATCTATTCGCTTTAGAAGAAATCCTAGAACGTGAGGCTACATCAAAGAACTTCGACACGCTTCCTATTGAGGTGAAACAGAAAAAGCCTTATATTCCCCCTATGTCACATCCTTGGAAACAGGCTTCTTATCTTGCTTATGTGGCAAAGCAAAAGCACCGTCAATCCGGTGCTAATGTTTAATTATTTTTAAGACATTTTCATTTTTGCTTGACATGAATTACATATTTAAAATCTGGAAGTTTATACAATATATAAAAATAAAGTCCAGCCACTAAAAAAAGCTAAACTTTATTTTAATTATTATATGCACAAAGCTATCTACAAAAAAT # Right flank : CGCAAAAATATTATTTACTTGCTAACTTGTAACAAATTTCCATCAAATGAAATCTCTCTTTCTTTCAATCTGTTACATATCACTGATTAAGACACACAATTTAGCGCGAATCTCCTAGAGAAAACATGGGAGCTTAATATTCGCAAATCTTAAAATCTTGTTTTCCTATGATAATTATCATCGAACATGATAAATATCTGAAATAACTCTTCTGCTGAAAATTCAATTTTTCCTTGATATTTTTCAACAATCTGTTCAATATTTCGGAAACCAAAACCGTGCATATGATGATCCTTTTTATTACTAATTAAACGATCATCCTTTATAATCACTTCATCTTTATCATAAGAATTTGATAAATCAATATAAATAAAATCATCTTTATGTCCAATACTTAAACGGATTAATTTACGCTCACATTTACAAACCGCCTCTAAACTATTATCCAACAAATTTCCAAGCAAAATACATAAATCCATATCATCTAAAATTGCCAGCGT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAAATCCACAAGTTCATGAGAAACTTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : NA // Array 1 155286-154431 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUJU01000001.1 Absiella sp. AM27-20 AM27-20.Scaf1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 155285 34 100.0 34 .................................. TGGTCATTAAAATTTTCTGTGCCTGATTGTCCAG 155217 34 100.0 35 .................................. ATTTCGTGAGCTGTATACTCGTAAGAAACCATAGC 155148 34 100.0 35 .................................. GAAAACCTCTGCTGACGGAGGAGATGGTGTCCCCG 155079 34 100.0 34 .................................. TGATAGTAGGTGGAAATTATGGTAGCACGGTAGA 155011 34 100.0 35 .................................. ATTTTGACCAATAATGCTAAAACGCCACCAAGTAA 154942 34 100.0 33 .................................. ACACTATGACGGAGACGGCCATAAAAGCCGCCT 154875 34 100.0 35 .................................. AAGAAAGTAAAAATGTCGCTCCCATCCGACCAAGG 154806 34 100.0 36 .................................. TTTTTTAGGTACGATACACACTTGTATATAGTCATG 154736 34 100.0 34 .................................. GATAAGATTAAGATTTTTTTTATACATCTTAAAG 154668 34 97.1 35 ...................A.............. TTTACTTCTAATTGCTTTTGGTTTACAGTTACTTT 154599 34 97.1 33 ...................A.............. TGTTATTCCTGATTTTTTAATAAGATAAAAAGA 154532 34 97.1 34 ...................A.............. CTATTTTAAAAATACCATCTATATATATTGTTTC 154464 34 82.4 0 .................G.A.....A..C...CG | ========== ====== ====== ====== ================================== ==================================== ================== 13 34 98.0 34 GTCATTATGCTATATGCATGATGTGGATTTAAAC # Left flank : AATATAAATATAGTATAGGAACTTATTTTTCATTGCTGGCATATGCAGATGAACCAATTCAGCATGCGTGGTTTCTATCACCAATTGTGAATATGCAGGTTATTGTAGAAAATATGATGGAATAGTTTCATATAGATGAAACACAATTAGAAAACAAGAGATAAACCAATTTAGATATGGTCTATTCGGATATCCTTTATGGAGAAAAGAATGATATGTGTGATTGGTTGTTCACAAATTTCATTGTGATTTACAAGTCATGAAGAATGGAGAGCATTATTTCCAAACATCTCAACAGCTTGCATATCATACTAAATGCTTAAACAATCATCTTATTTAAACGCTTGCGAACCTTAAGCTCACATGATATTCCTAGGACATTCGCGCATGGAGATATCTTATTTTGCACTATATGTATCGAAATGAAAAAAAGATTTAAAATCATGCGTTGAAAAGCAAAAAAAATTGTTTCATTAGCGTATGATTCTAACAATTTTGCG # Right flank : ATTAGCACCGGTGCTAATGAACCATTTGCAACTGTTGTTATACTTTATACGGCAATGATTGAAGCATTGTATCGTTGTAAATGTCTTGAATTTAAACTAAAAAAGATATCACATCCGATTTGGATATGATATCTTCAAAATGTTTAAGCTTTACTATCTGCCAGAACGGTTTTAGTTTCTGGCTTTTCTTCTTCATTGAATAACTTTTTACCTGAACAGAAGGTAATCATTAAGCCTAATGCCACAAGTAGAACAGCGAAGATTAATTGTAAACCATCTGTCATAAATACGAAACCACCATTAACAAATAATTTCAAACAGATATTGTAGATAGATAAACCAAGTGATGTCATAGTACAAATTAACATCAGGGTCATAGGTACATATAACATCCATCCTTTTCTTCCAGTGACTTTTAAGAATACAGATAATGATACAAGAACCATAGCGCCTAATAACTGGTTAGCACTACCGAATAATGGCCAGATATTATTATATCC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATTATGCTATATGCATGATGTGGATTTAAAC # Alternate repeat : GTCATTATGCTATATGCATAATGTGGATTTAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 216437-215007 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUJU01000001.1 Absiella sp. AM27-20 AM27-20.Scaf1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 216436 33 100.0 32 ................................. ATTTGATCGATGAAATATCCACTAGTATTTAA 216371 33 97.0 34 ................................C ATCCTCATTGTACTTGTCATACTCATCATTAATC 216304 33 100.0 34 ................................. TCAAATGTTACTACTTCTCTTCCGCTCTCTTTAT 216237 33 100.0 32 ................................. CAGCAGAGTACGAAAGAGGAGTACATGTAAAG 216172 33 100.0 32 ................................. ACATCTGCATGAATTCCTTTTGATTTTACATA 216107 33 100.0 32 ................................. TTAATCTTTGTTTCATCCTGGTGCTTTAGCTC 216042 33 97.0 33 ................................G AGTTGATTATATGAAATTTAAACCATTGAATAT 215976 33 97.0 34 ................................A TTATGCTCAAAGTCATGTGATCGAAGAAACAGAA 215909 33 97.0 33 ................................G TCGTAGTAGTACAAGAACTTTGGCACATTGGTT 215843 33 100.0 35 ................................. GTTAGATGGTCATATGGCACTGGCACGCCTTCTAT 215775 33 97.0 32 ................................A GCACTGACTCTTTCCATAGCATCGATCGTACG 215710 33 100.0 34 ................................. CTGGTGCATGCTCTGGCAGGTTCCTCGTTCTTTG 215643 33 97.0 35 ................................C GTAAAATGTATTTATCTTAGTGGACAATGCCAGTG 215575 33 100.0 33 ................................. TTAAGAAAGTGATTCCGTCAGATATCGCTAAAA 215509 33 100.0 34 ................................. CGAAAAAAGTCATATGCCGAACGTCAATTGTCGA 215442 33 100.0 34 ................................. AGCAAAACATTTGATTATCCTAGTTTGCCTTTAT 215375 33 97.0 34 ................................A GTCATGGATAAAAGTCCTCAATGACGATCCTCAA 215308 33 100.0 35 ................................. CAAGAACTTGCTGATCAATTAGTCAAAGATGGTTG 215240 33 97.0 34 ................................A CTTTATGTTCTCCGATTGCATCATTGTTATAGCC 215173 33 97.0 34 ................................A CTGTAACCGGCACGAATGGCTGCCTGTGTGATGT 215106 33 100.0 34 ................................. TCCTTTCTGTGCAAATCACATTTATACCTCTACC 215039 33 84.8 0 ..........T........C..AT........G | ========== ====== ====== ====== ================================= =================================== ================== 22 33 98.1 34 GTCTAGCTCTATATGAGCTAGTGGATTTAAATT # Left flank : GATACGTGGTGATTTGGATGAGTATCCTTCCTTCTTAGCGAGGTGATTTTATATGCCGGTATTGATAACATACGATGTTAATACAGAAACGAAAGCTGGGAAAACGAGACTAAGAAAGTAGCAAAAGAATTTATGAATTATTAGCATAGATTGCGAAATTCTGTTTTTAAATGTTTTATGGGTAACGTAAAAGCACTTGAAGTTAAACATATTCTGGAAAAGATTATTGATAAGGATTATGACAGTTTAAGATTTTATTATTTAGGTAATCAATATGAAAATAAGGTTGAACATATTGGTGTAAAACCTAGTTTTAAATTAGATGATGTATTGATCTTATAGTAACGCGAATATGAAGCTCCCATGAAATCGCTGGGAGGTTCGCGCAAAAATGTGTTATATTTTGGATGATATGTAACATATTGAAAATAGCGATGTTAATTTTAAAAAATATTGTTTGAAAATTCGTTACATTGGTTTGAATTTAATACATTCTTGCT # Right flank : TACATTATGTGCTGCCTTTTAAAATTCTGTGCGTTTAGATTGATAAGAGTATTACAGTCTTTATCTAATATTTCTGTGAAAAGCAACTCCACTTGACATACTTATGATCTCATCTTCAGAAGAGGCTTTGTAATATATCATTTCTTTGAACGCTTATTGAAAAAAGTACTACTCTATTATAAATTATAAAATTGAGGCATCCTTGTGTATTATAGTTATATCACGCTTGCGTAATATGTTAGGTTTTAAAGCACATGATACTTCATACCAGCTGTAATCCATTCTTTTAAGATAATTAGATTGCTACTAAATTCAATATAAGTGTAAGCATATACCTTTGCATATTCTTTACAATTCATAAAATAACCATATCGCTCGTGAATATATAATAAAGGATTTCTAAGAAGTACTACTCACGCCGACAATAGTTGTCTTAAGCTGTATGGTCACTGTTCCAAGGGAAGGGATCGCCAATATTGTATAAATTAATGTATTACCTA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTATATGAGCTAGTGGATTTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: R [matched GTCTAGCTCTGTATAGAGCTAGTGGATTTAAATA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 12636-13262 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUJU01000046.1 Absiella sp. AM27-20 AM27-20.Scaf46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 12636 33 100.0 34 ................................. AAGATTAAGTATATGGGTATGCACCAGGAGAGAG 12703 33 100.0 33 ................................. TCATCTGTAAGATATCTTATAAAGCTGTCTTGC 12769 33 97.0 34 ................................C CAATTTGATGTGCTATTGCGCAACTTTAAAGAAC 12836 33 97.0 34 ................................T CAAAAATCAATAGATCTCCATCGTTTATATTTGC 12903 33 100.0 32 ................................. CTTTATCGTTACCGACAAATTTACGTCCTGGT 12968 33 97.0 33 ................................G TAGCTATCTGATTTTGATGCTACGAGATCTGTT 13034 33 97.0 32 ................................G TGCAATGTATTTTAGCTATATGTATCGTATGG 13099 33 100.0 33 ................................. TTGAAGATCTACGTGATACGATGGTTGATATGA 13165 33 90.9 34 ..........G.........A...........G ATGCAGATGTCAAAGTAACGATCCATGCAAACAG 13232 31 81.8 0 ..................A.A.--.....G.C. | ========== ====== ====== ====== ================================= ================================== ================== 10 33 96.1 33 GTCTAGCTCTATATGAGCTAGTGGATTTAAATA # Left flank : ATACGCGGTGATTTGGATGAGTATCCACCTTTTTTAGCAAGGTGATTTTATATGCTGGTATTGATAACATACGATGTTAATACAGAAACGAAAGCTGGGAAAACCAGATTAAGAAAAGTAGCAAAAGAATGTATGAATTATGGGCATAGAGTGCAAAATTCTGTTTTTGAATGTTATATGGATAATGCAAAAGCACTTGAAGTTAAACATATTCTGGAAAAGATTATTGATAAGGATCATGATAGTTTAAGATTTTATTATTTAGGTAATCGATATGAAAATAAGGTTGAACATATTGGTGTAAAACCTAGTTTTAAATTAGATGATGTATTGATCTTATAGTAACGCGAATATGATGCTCCCATGAAATCGCTGGGAGGTTCGCGCAAAAATGTGTTATATTTTGAATAATATGTAACATATTGAAAATAGTAATGTTAATTTAAAAAAATATTGTTTGAAAATTCGTTACATTAGTTTGAATTCGATACATTTTTGTT # Right flank : ATCTAACAACGCCCGCTTATTTTGGCGATATGCTCGACTTTTTTCAGAACACCAATTTAAACACTGTACAAACTAATGAATTTATATCACATTTTTATAAACAATTTTATAAACGGCAGATAATACAAAATACTATGTCTAATGTCTTTATAATTGTGTATAATATATTCGTTTGATTATGAGGTGAAAATAAATATGTACAAACAATATAGAGAAGGCTGGCTAGAAGTAATATCTGGATGCATGTTCGCAGGAAAAACTGAAGAATTAATTCGTCGTATTAAAGTATTAGAGTATGCAAAAAAGAAAATAGCTGTCTTTAAACCAAAAATAGATAATCGATACAGTGAAGAAAATATTGTATCGCATGCAGGAAGTAGTGTGAAAAGCTTTTCGATTGAAAATGCACATGAAATATTCAATTATATTGATGATTCATATGACGTTATCGCGATAGATGAAGTACAATTTTTTGATGAAGAGATTGTTGAAATTTGTGA # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTATATGAGCTAGTGGATTTAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: F [matched GTCTAGCTCTGTATAGAGCTAGTGGATTTAAATA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.30,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //