Array 1 292248-295192 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVFA01000017.1 Fusobacterium necrophorum subsp. funduliforme strain F1314 NODE_1_length_465313_cov_68.738_ID_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 292248 30 100.0 37 .............................. CTGGATTATAGATTTAACAGGATGATGGATGGAAAAA 292315 30 100.0 34 .............................. GCAGGAAGAATTCATCATATGATAGTCCATCAAC 292379 30 100.0 38 .............................. TTCCTTCGTGTCCGATGTTTGTATTTCGTCTTGAAGTT 292447 30 100.0 36 .............................. TGATTTTTTGCTTGCAATCTAAAAAAATATTGTATA 292513 30 100.0 37 .............................. GTCAAAAGAGAGAATAAGAAAGAAAAGAAGAAGCTAT 292580 30 100.0 37 .............................. AACTTTGAAACGGTTTTGAGTTCAATTTCTGAAAAAG 292647 30 100.0 35 .............................. AATGTAAAAAAAGATTTTTACAAGCACGAGTATAG 292712 30 100.0 36 .............................. TTTTTTCCCTCTCTTGCAGCCATTCTTTGATTAGAA 292778 30 100.0 38 .............................. TCAATTTTTTCTTGATGGTTAGAGCAATACTTATAACC 292846 30 100.0 37 .............................. TTTTCCCTCCTAGATGTTTCTTTTCATTTTTTCAAAA 292913 30 100.0 38 .............................. AACGTCCAAAGGCTTTCAAGCGTAGGACTTCTAAACAA 292981 30 100.0 37 .............................. GAAGCAAGGAGACATACATAGACAAAGAAAAATATTT 293048 30 100.0 36 .............................. CTCAATAAATTGTCATAAGCTTTCTTATACAAAGCC 293114 30 100.0 35 .............................. CCAAACAGCCTTTCTATTAAGGCTATCCAATTTCA 293179 30 100.0 38 .............................. GAATGAAAATTCGATAAAGTTTTACGACAATTAAAAAC 293247 30 100.0 35 .............................. ACATTTAAAATCGGGGTGTTCATTGAACATTTCTC 293312 30 100.0 35 .............................. CGAAATGTTCTAGCTTCCTTTTTCTGTTTTTTTAG 293377 30 100.0 37 .............................. GAAAGGATTGAACCTTGAAAAACTGCCTAACTCTTTG 293444 30 100.0 37 .............................. TAAAAAGAAAGCAACTTACAAAAAGACAGTGAAATCA 293511 30 100.0 35 .............................. AGCTAGCTTTGAAGGTTATAACATCACATCATCCC 293576 30 100.0 35 .............................. CCTTTTCTTTCTAAAATGTTATTTCTTGTTTGATC 293641 30 100.0 38 .............................. TCTTTCGTTAAAAGATATTCTTTATAGCTTCTTCTTTG 293709 30 100.0 37 .............................. TTGTTAACAGTAGATTTGACAAATCCAACTCAAAAAA 293776 30 96.7 37 ...............A.............. TATAAAGGTTTTAAGATTTACGAAGAACGTAAAAACC 293843 30 96.7 35 ...............A.............. TTTCTAACTGTGCTTTTTTGTTTAATAACATCATA 293908 30 96.7 36 ...............A.............. GGAGATATTTTAGAAATAAAAACAACAATTACAAGA 293974 30 96.7 35 ...............A.............. TTTTTTAAAATTTTAACCAGTTCCTCGATAATTTT 294039 30 96.7 35 ...............A.............. AAAATAATAGGAGGAAAGCATGGAAAAAGAAACAG 294104 30 96.7 38 ...............A.............. TTGTCCTTATCTTCTATTAGTTGGTTAGGATCTATTAC 294172 30 96.7 37 ...............A.............. GAAATTTATGCAAATTTACAGGATAAGGAAAGAAAAA 294239 30 96.7 35 ...............A.............. CGTTTCGGCTCAAAATTTAATGAAATGCTAGAAAA 294304 30 96.7 36 ...............A.............. TATTATTTAACTGGGTATTGTACTTGTGCTGAGTGT 294370 30 96.7 38 ...............A.............. GAACCAATCAAAGAGACAGCTCATGTAGAATCTTTAAT 294438 30 96.7 36 ...............A.............. TCGTGTGAATATTTCTTACTTTTAACGTCAACTCTG 294504 30 93.3 36 ...........G...A.............. AACAGAAAATATTGCTGTTTTTATGGATTCCCAATT 294570 30 96.7 36 ...............A.............. GCTGAAATAAGACAATATTGTCTAAGAAAAAAGAGA 294636 30 96.7 35 ...............A.............. GTGAAGAGAGAGAGAAATACAGACATGAATTAGAA 294701 30 93.3 35 ............T..A.............. AGCTAAAAGACAGATTAAAAGATTAGAAGAACAAA 294766 30 96.7 35 ...............A.............. AAATAATAAGGATATGGCTGTGTTTCCGGATGACT 294831 30 100.0 36 .............................. AATTCTGATATTGTTTGATTAAATATAAAGTGACCA 294897 30 100.0 36 .............................. TCTCCTCTGTTGAACAGATGACCTATGATTGCATAA 294963 30 100.0 36 .............................. TTTAAACTTCCAAACTTCTCTCCCTCATTTAACAAA 295029 30 96.7 36 ...............A.............. TTTAACATCCCAATACTTCTTCCGCCGTCTTGTAGA 295095 30 96.7 37 ........................A..... TTTCTTACTATCTGGAAACATGCTATTTTTTCAACAA 295162 30 73.3 0 ..C........TT....A.TT...TA.... | T [295184] ========== ====== ====== ====== ============================== ====================================== ================== 45 30 97.9 36 ATTAGAGTATTACTAGAGTAGAATGTAAAT # Left flank : TTCCAAATGTGGTGGTGATAAAATATGTATGTAGTAGTTGTATATGATATCTCTTTAGATGAGAAAGGGACTTATCATTGGAAAAAAATTTTTCAAATTTGCAAACGATATTTGCATCATATTCAAAACTCTGTGTTTGAAGGAGAACTATCGGAAGTGGATATTGAGAGATTAAAATATGAAGTATCTAATTATATTAGAGATAATCTAGATTCTTTTATTATTTTTAAATCTCGGAATGAGAGATGGATGGAAAAAGAAATGTTAGGAATACAAGAAGACAAAACAGATAATTTTCTGTAGATATTTTCATTGTCGACCTCTCATAAGGTAAAAATCTCAGGACATTGACAAAAGAATAAAAGAACTTGATTTTCCAAGAAAAAAAGTAAAGATAGAAAAATAAAAAAGGGTTTTCTCTTAATTTTTTTTATAAAATAACTTTATCGACAATTATAGTCAAAAAAAGTTATAGATAGCAATGTATTTTAAAGTCTCGT # Right flank : TTTGAACTATAACTAAAAAAGAGGTAAAAATGTTATGTTGGATTAAAAATTTGCAATATATGGGTTCATTATTGAAGATTGTTTGAGAGTTTCTTTTGAATTAAAAAAAGGGAGCTTTCATTGTAAGAGAATACGTAAGGATATGGTACACATAATCAGGTTACTGGAACTTCGTCCGACGACATCACCGTGATGTTGACAACTTTAGATTCCTTAAAACAAAGTGAAAGAGAAATTAATATGGAAGATATGAAAAAAAGATTTAGTAATTGTACAAATGACGAGATTGACAAGAGTTCAGAAATTACACATGTTCACTCTATTTCAAAAGAAGCTTGCAGAATTTATGTGGAAATAGTGAAAAGTCTGATTATAAATAAAAATTTAAAAGACATCTTAGAGAATTTGGAATGTACAAAAAATTTTCAAGATTAAAACATCTCGATACTTTGTAGGAAGAGCAATATATTATGAACGCTTTAGGAGGTAGTTTGTGATGT # Questionable array : NO Score: 3.08 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAGTATTACTAGAGTAGAATGTAAAT # Alternate repeat : ATTAGAGTATTACTAAAGTAGAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //