Array 1 1364372-1362002 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATWF01000001.1 Geovibrio sp. L21-Ace-BES K300DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1364371 28 100.0 32 ............................ TGGACCGCATCAGCCCTCGTACAGCTTACGCA 1364311 28 100.0 32 ............................ TGCGCAGAAGGACGGCGGCCCTTCATGGTACG 1364251 28 100.0 32 ............................ AGATGAATCTTCCGGGGGTGGATGATGCCTAG 1364191 28 100.0 32 ............................ GGCAGGCAGATGCTTTTGCTGTACGAGTGCTA 1364131 28 100.0 32 ............................ GAAGCGCACTGCGCCCATATCTTGTGATACCA 1364071 28 100.0 32 ............................ TTGAGGGTGGGAAGAAGTATATCAGGACAAAA 1364011 28 100.0 32 ............................ ACTGGAAGATTGTTGCCTGGTGGTCGTGTTCT 1363951 28 100.0 32 ............................ TCTTTGACAGCCAGGCAAGGACATTAGACGAG 1363891 28 100.0 32 ............................ GTTATCAAGCTCCCCTTCAAGAGTTTTTTCAA 1363831 28 100.0 32 ............................ GCAAGACCGCCGGGCGGCTTAAAGCTGAAGGG 1363771 28 100.0 32 ............................ TCATATTCAATAAAGCGTTCTTCACTATTAGT 1363711 28 100.0 32 ............................ TCTTAGATCAGCGCCTTTGAGATCGGCGTGCC 1363651 28 100.0 32 ............................ ACCGGCACAGGGAAAAGCTTGATCGGGATGTC 1363591 28 100.0 32 ............................ ATTCCACCGTAAAAAAGATGCGATCTCTAATA 1363531 28 100.0 32 ............................ TGCTGTGGTGTTGTTTTCAGTGATTACAGCGA 1363471 28 100.0 32 ............................ GAAAGGGGCTTACTGGGAGATTGAAGAGGCTT 1363411 28 100.0 32 ............................ ATATCGTCGCACTCGCAACAAAATCCGGAGCT 1363351 28 100.0 32 ............................ TTTGTTTTGCGCCCGCCCCGCCCCGCAGGGGC 1363291 28 100.0 32 ............................ AGCTCCGGTCCTATCCTTCCAGCTCCGGTCCT 1363231 28 100.0 32 ............................ CTTAATAGCAAAGGGTTGTAACAAGGGATACG 1363171 28 100.0 32 ............................ CACCGGAACTTACTTCAACGAACCTATCCGCA 1363111 28 100.0 32 ............................ CTTCGCAAAAGATTTGACCGCTTTCTAAAACA 1363051 28 100.0 32 ............................ TCTGATAGGTGTTATTAATAGTTACAACGTAA 1362991 28 100.0 32 ............................ TGTATATGAAACCATAGCTTTTACAATATAGC 1362931 28 100.0 32 ............................ AGATACTTGTGTAGCCGGTGAGTTTATAATGA 1362871 28 100.0 32 ............................ CGCTTGAGCAAGCGGGTTCGGCTTGCTTTCTC 1362811 28 100.0 32 ............................ AATGTCAACAAGCCTAGCAAAGTTTTTTGAAG 1362751 28 100.0 32 ............................ ACGGGAAGGACAACGTTCTGGGTATAATAACA 1362691 28 100.0 32 ............................ TGAGATTAGCTTTCTTCCCACCCTCGCTTTTC 1362631 28 100.0 32 ............................ GGATATGTTTGATGACAAATTCTTGGAATTTG 1362571 28 100.0 32 ............................ TTACCAGCACCGACCGATTTTGTAGCACCTGA 1362511 28 100.0 32 ............................ CTGGCACGCTGATCTTTGGTGTGCTGATCTCG 1362451 28 100.0 32 ............................ CCACATATTTATCAAGGCAAAAACGGCAAACG 1362391 28 100.0 32 ............................ AGACAATGCTACTACTCCGCCCATAGATATTA 1362331 28 100.0 33 ............................ ACACCCCGTACGCCCAGTGCCGTATGACATCAT 1362270 28 100.0 32 ............................ TGTATCATCTGTTATTTCGACTTTGACGGTCG 1362210 28 100.0 32 ............................ ATATCGAAAAGTATATGAAGGTGTTTATCCTC 1362150 28 96.4 32 .................C.......... GAAATCGAGCTTGCGACTAAATATGTCTTTGT 1362090 28 96.4 32 .................C.......... AAATACACCATCATAATGTGTATCTAGCATTT 1362030 28 78.6 0 .................C..T..TTC.T | A [1362004] ========== ====== ====== ====== ============================ ================================= ================== 40 28 99.3 32 GTTCACTGCCGCACAGGTAGCTTAGAAA # Left flank : AGATGAGCCTTAAAAGGTTCATGGAGACAGGCTGGCTGGGTGGCATGCGTGACTACGTTCAGGCAGGGATGGTGAAATCTGTCCCCTCCGGTGCGGAGCATGTTGCTGTGCGCAGGGTTCAAGTTAAGAGCAGTATGGAGCGAGTCCGCCGCAGACAGATGAAACGCCACGGCTATACCGAAGAAGAAGCTAGAGAAAAATACCCCGATTCAGCAGAGAAAAGGACAAGAAAGCCCTTTATCAATGTAAAAAGCGGGAGCACAGAGCACAGTTTTCGCCTCTTTATCCAGCAGAAGCGTGTTAATGAACCCGGCGAGGGGGGCTTTAATAAGTATGGCTTAAGTAAAGGGGGCACAGTACCCCTTTTCTAACCCTTTTTTCAGAGCATTTTTTAAAGGGTTCCCTATCAGTGATTTAGGGAACCCTGAAAAAAAAAGGGTTTTTGCAACTAAATATTAGATATGGTATAGGTAGTATAGGTTTGCCCGATTTTGGGAACT # Right flank : TATCAAGATTTGTTTTTAAGGGCCTGGATTCAATAATTAAGTGCAACTTTTAAGTAGTGGTCAAAAGAGGTCAGGTGCGTTAGCATCGTAGCTCTTTAACCACCACGTCAAAGGAGCACCGAATGAAGAACTATACACACCTGACCCGTGAACAAAGGTACCAGATTTATGTGCTGAGGAAAACCGGACATTCTCAGACGGACATAGCTGATTTGCTTAAAGTACATAAATCTACCATCAGCCGAGAGTTACGCAGAAACACAGGAGGTCGTGGTTATCGCCCAAAGCAAGCTCATCGCAAAGCTATTGAACGAAGAATGGACAAGGTCCCAAGACGGATTGCACAAACTGAATGGTATTTTGTTGAACGTCTTCTGCGTGAAGACTGGAGCCCTGAGCAGGTGAGCAATTGGCTAAATCAAAATTATGGAATAAACGTAAGTCATGAGCGTATCTACCAGCACATTCTTGAAGATAAAAGTCATGGTGGAACACTTTAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1374886-1373055 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATWF01000001.1 Geovibrio sp. L21-Ace-BES K300DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1374885 28 100.0 32 ............................ GCTACGAGATATCGTAATGAACTTTCCGTATC 1374825 28 100.0 32 ............................ AATGGCGGGAAACGCCACCGCAAGACCGCCGG 1374765 28 100.0 32 ............................ GCTGTGCAGGCATCACAACTCTTAAAGAGACT 1374705 28 100.0 32 ............................ GTTGGGCGTGGGGTGTATAACCTGGACCGCAT 1374645 28 100.0 32 ............................ TAAAAAAAATTGCTCAAATTGAAATTTCTGTC 1374585 28 100.0 32 ............................ ACTGGCACGGGGAAGAGCTTAATCGGTATGTC 1374525 28 100.0 32 ............................ TTTAAATTAGCATGTCTGAGATCAACGCCTCT 1374465 28 100.0 32 ............................ TTGATATTAGCGCACCAGAAATTAGCGCCTTT 1374405 28 100.0 32 ............................ TTGAAGGCGCTAACCTAAGCGGTGCCGACCTC 1374345 28 100.0 32 ............................ CGGCGATATAGATTATCACGAAGCGGATAGTA 1374285 28 100.0 33 ............................ TTACTTCTTCAGCACTATAACCGAGTTCAGTGT 1374224 28 100.0 32 ............................ CGAAGCACGTAATCGCAAAACTATACGGCTTC 1374164 28 100.0 32 ............................ CTTATTGCCGGGGTTTTCTCCTCTTGTGTATT 1374104 28 100.0 32 ............................ TATGAGATTAGCATGCCTGAGATCAACCTTTG 1374044 28 100.0 32 ............................ ATTTTGTGTCGCAAAAGACAACCTTTATATCC 1373984 28 100.0 32 ............................ AGTAAAAATCGCTTTCTCACACGTAAGGATGC 1373924 28 100.0 32 ............................ TGCACACTCAAGAGCCTCGGTTATTTCCGGCT 1373864 28 100.0 32 ............................ TATCAAAAGATACTGCACACGACACTTGAAGA 1373804 28 100.0 32 ............................ GCTCTCCTGCGGATCATCTCTTGAAGTCCTGC 1373744 28 100.0 32 ............................ GTCATGATGTTTCCTCCGTTTTTTTTGTCGCA 1373684 28 100.0 32 ............................ ATCCGCTTATCTGTGTTTAAACCATATGAGAG 1373624 28 100.0 32 ............................ ATAGATATTACATTACCAGACGTTTTTCCCGT 1373564 28 100.0 32 ............................ TAACATAATTAAGCCTGCTGGGGAAGCTCTGG 1373504 28 100.0 32 ............................ CCCGAGGACGAACCAAGAGGACTACATAATAC 1373444 28 100.0 32 ............................ TGAACAGTCACTTCCTGCACCGACCGATTTTG 1373384 28 100.0 32 ............................ GGATACGTCGGACCGAGCAGAGGAGGAGGCTA 1373324 28 100.0 32 ............................ TATTTGGCTGACATCATGCGGGAATCAATATG 1373264 28 100.0 32 ............................ AATTCCATCACAACCCCGTCTTACATACAGGG 1373204 28 100.0 33 ............................ CAGTCTCCGGTGCGGGCTAGTTCCGCCCTTGCA 1373143 28 100.0 32 ............................ GGATGGCGCAGCTGGACTTGCTTACCTCAAAG 1373083 28 82.1 0 ....................T..TTC.T | A [1373057] ========== ====== ====== ====== ============================ ================================= ================== 31 28 99.4 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ACTTTGTTCCCCAAAAAGTTCCCTGCGATCTTTTTTTAATTAATTTGGGAAATTCATCATCCTGAGAATTTCCCTGGTCTGATTTTATCTATGGAATTTACCATTCATGGAAATTCCATTGTTGTTCGAGCGGGGTTACCCCGCTCTCTCGTACTTCCGGCTACATAAATCGAATAAAATTCAATTTAACTCCGCCTTCAGGGCTTCCATCCATGGAAGCCTGTTGAGTAGCGACCTTAGTAGTTATCTACAACGTGAGTTTTTGAGGGGTGCGGGGAACTTTGTTCCCTAAAAAGTTCCCTGCCGCTACGCTTGGCAAAGCCTTCGCTCCGATTACTTCCGTTATGGAAGAAAGAATGCTTTTGCCTTTAACCCTTTTTTTTAATTATTTTTTCAAGCGCTGTTTATCAGTTACTTACGGAGTCTCTTGAAAAAAGGGTTTTTGCTCTTTTATTTATACTATGGTAATATTCACAGGTAGCTATGAGTATTCATGAACG # Right flank : TATCAAGATTTGTTTTTAAGGGGTTTCAGGGGAACTTTTTACATAAAAATTTCTTCTGAATTAATCTGGAAAATTCATCATCCTGAGAATTTCGAGGATGTGAACTAAACTTCGTCTGAATGAAATTCATACCAACTTTTCTACATATTTACGTGATGTGCAATTCTCTTTAAAATATTGTAACCTGTGTAATAATTGAAGGGTTGGAGGCTTGTATGGAAGATTTGAACCCCTCGGACATGAAGACAATCCTGCTCTCGAAGCGGGCAAACATATACTATCTTGAGCATACCAGAATCCTTGTTAAGGGTGGCCGTGTTGAGTATGTGGCTGAGCGTGGCAAAAGGAGCGATTATTACAACATCCCCATTGCGAACACAACCGTAATTATGCTTGGCCCTGGGACATCTGTCACGCAGGCGGCGATAAGGTATCTGGCTAAAGCGGGCGTACTTCTCGGCTTTTGCGGTGGTGGCGGAACCCCGTTTTTCGGTGGAACG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //