Array 1 3126-1945 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFWS01000129.1 Klebsiella pneumoniae strain G4747 G4747_NODE_58.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3125 29 93.1 32 ............TG............... TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA 3064 29 93.1 32 ............TG............... TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA 3003 29 89.7 32 ............TG............T.. TTACCAATGGGGAAAAATCTTCATTTGTAAAT 2942 29 100.0 25 ............................. AACATCAGTGGAAATCCACTGCGGC Deletion [2889] 2888 29 96.6 32 ......T...................... CGAAAACGGCAACCTTCATAAAAACGTCTTTT 2827 29 93.1 32 ............TG............... CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG 2766 29 100.0 32 ............................. CGGTAACGCAAATGTGATCCGATGTCGTCAGG 2705 29 89.7 32 .........T...T.A............. AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC 2644 29 100.0 32 ............................. CAGGTTATACTGGCAAAACGTCGATGGCTCTC 2583 28 93.1 32 .....-.......T............... TAAATCAGCAAATATTGTTGTCTACCGTGTCG 2523 29 93.1 32 ............TC............... AGCAGTTCGAGGAATAGTGACAGGCAGTGCAG 2462 29 93.1 32 ............TG............... TTAATGTTTTGTTAATTTATGAGTGTGGTGAT 2401 29 93.1 30 ............AC............... CAAATCGAAAATCCGGCTGTTTGAAAAATG C [2390] 2339 29 89.7 32 .............T.A............C CATGAGCCTGCGCACTCTGACGCGCACCTGCT CC [2332] 2276 29 100.0 32 ............................. TGAGGCTGCTGACGGAGAATTGGGACCTGTTC 2215 29 96.6 32 ..............C.............. CCGACCCGGTGCCCAGGAGAACTGGCTGAATA 2154 29 93.1 31 .............G.A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 2094 29 93.1 32 ...C......................T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 2033 29 96.6 32 .............T............... GGCATGAGCGAGAACCACTGCGAGAGTGTGGT 1972 28 89.7 0 ..........A............-....A | ========== ====== ====== ====== ============================= ================================ ================== 20 29 94.3 32 GTATTCCCCCCGCATGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : CATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGTGGAATTTGAATTGACGCGATAGCGTTAAAGGAACATTTAGCCGCGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAGCTGCGTGACCAGAGAACAGGCTTACTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACAAACAGTTTTAAACAGAACCAAAGCAGACTGGCAAGGTTACAGCGCCAGCTTGCCCGTAAAGTGAAATTCAGTGCGAACTGGAAGAAGCAGAAAGCAAGAAC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCATGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5184-7771 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFWS01000090.1 Klebsiella pneumoniae strain G4747 G4747_NODE_22.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5184 29 100.0 32 ............................. GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 5245 29 100.0 32 ............................. ATCTATTCCAGCATCGAGCTGCACCCGCAATT 5306 29 100.0 32 ............................. GTGGTTCGGGCGGCTCCGCGCAAAACCACGCA 5367 29 100.0 32 ............................. CACCGCGTTGCTGTTCCCGCCGGTCGCCGCCG 5428 29 100.0 32 ............................. ATATCGCCGTCGCAGTGGTAGAATCGGTCTTG 5489 29 100.0 32 ............................. CCCGGAGGAAACGTGGCAACAGTTCAATACCC 5550 29 100.0 32 ............................. AACGGAATTCAGTGGAGAGATGGGAAAGGTAG 5611 29 100.0 32 ............................. AGGACGGCGAGCTGATCGCCGGACACGGTCGA 5672 29 100.0 32 ............................. GGATACAAATCCAAACAGCGAGCCATTTTCCT 5733 29 100.0 32 ............................. TTTATCGGACCGGGCGCGGACACGCAGACAAC 5794 29 100.0 32 ............................. GCGGGTTAGTTATCCATGGTGCATAGGGGCGA 5855 29 100.0 32 ............................. TCACTTGATAGTTTATCTCGCCGCCGTGGCGC 5916 29 100.0 32 ............................. GTGCGGAACAAACCAGTAGGTGTCCAGGTCGT 5977 29 96.6 32 ............................T TTTTTTGACGCGTTCGGACTTCAGGTAATATT 6038 29 100.0 32 ............................. GGTTTACCAGCGGTAAAACAGCAGGAAGGAGA 6099 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 6160 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 6221 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 6282 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 6343 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 6404 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 6465 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 6526 29 100.0 32 ............................. CTCGGTGACCGGCAGATCGTTTTGAAACACAT 6587 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 6648 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 6709 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 6770 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 6831 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 6892 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 6953 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 7014 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 7075 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 7136 29 100.0 32 ............................. AACGTAATTGGCTTACGGGGCGGTCGGCACAA 7197 29 100.0 32 ............................. TCGCCGCCTGTTTTTGTCTCTTTCCGGGTGAG 7258 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 7319 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 7380 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 7441 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 7502 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 7563 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 7624 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 7685 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 7743 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //