Array 1 249225-251566 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGTZ010000003.1 Klebsiella pneumoniae strain 5012STDY7312701, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249225 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249284 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249345 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249406 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249467 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249528 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249589 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249650 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249711 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249772 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249833 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249894 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249955 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 250016 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 250077 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250138 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250199 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250260 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250321 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250382 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250443 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250504 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250565 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250626 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250687 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250748 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 250809 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 250870 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 250931 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 250992 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 251053 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 251114 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 251175 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251236 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 251297 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 251358 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 251419 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 251480 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 251538 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 39 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //