Array 1 15328-15169 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNQT01000008.1 Haloplanus vescus strain CGMCC 1.8712, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 15327 29 73.3 35 ..GCA....ACG.A.-.............. CACGGGAAATCGACGAACTCGTAGTCGGAGCTCCT 15263 30 100.0 35 .............................. CCCGACTGGCGGTCGCGTCGGCGAGTCGTTGAGCA 15198 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =================================== ================== 3 30 91.1 36 GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Left flank : GCACTCGGATGACTCACCTCTGTAGCGGGAGAGCATGTAGCCTATCGTTCACACAACGAACACAAAAAGGGACGCAAAGTTCAGTGAAAGTGAATTTATATACAAGTCGTGTATGGCTACAAAACTAACTCGAGTATAGGTCGATGATGTGGTTATCGCGGAATCTCGTCTCCACTTGACGCGGGACATCTCGGTCACCAGTCCGCAATTCGAGAGCTATCTCGGCAGCGAGGAAGGCGATTGGGAACCGCGAGTACTCGATTTCCGAAAGACCTCCTCCAGTGTCAACCTCGAAAATAGTGGCAACGTCCAACTAGTCATCAAGACGGTCGCCGCCAGAGACTTGGAAGATTCTGTATTGAGAGGCTTCTGGTTGGATGGCGAACTCCAGTACGGGTTTGCGTCGTACTTCCTCGATATCCTGCCACTTGTGGACGCAAAACGACACGGTGCAGTGAATTGTACTGATCGATTCGATCCCCCGATTCAGAGAGAGGAGA # Right flank : TGTAACAATTAGAATCCAACTCGCTCCCAAATGATACATAAGGAGAGCAGAACCTCGACGACTGTGAGCTACACACTGATCACTCGAGGTCGTAGGAGGCGATTTCTCGCGAGCCGCACTTCGGACATTCCCCGGTGTCGCTCTCCATAGTGTATCCGCAGTGGCGGCATTCGTGGAGCGCTGTTGATGAGGGCCTCTGTCTGATGACCTGCCAGAAGAAGTCTTTACTGAGCATTAGTGGGATCGACGACCTCGCCACAACCAGGGCATTCGGCCCAGACCCCCGGCTCGCCGGCGGTCGTCTCATAGCGAAGAATCACATACCCTTCTGTGACGTTGTCGCCGCAGAACGAGCAGGTTCCAAGTACTGCTTGTCGATTATCGGGTGCCATTCTCACGATCTCGCTCTCTGTTCAGGGGGTGAGGGGAGCGTGTGACACTATTTCCGAGTTAGCCCGTCGCGACGGATCTAACTCTCTCCCCTCAAGCCAGATAGAACG # Questionable array : NO Score: 4.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 25209-29638 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNQT01000008.1 Haloplanus vescus strain CGMCC 1.8712, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 25209 30 100.0 35 .............................. ACCGGGGTCCAGTCGGTCACGTCCGACCGCATCAT 25274 30 100.0 35 .............................. GGTGGTGGGGGACAAACGACCCTCGAAGGCGCGAC 25339 30 100.0 36 .............................. GTCCGCCGTCTGCCGGGCCAAATCGGGGCGGCCGTG 25405 30 100.0 36 .............................. CAAATTAACATCGACGGCGTGACGAAATTCGACGGC 25471 30 100.0 36 .............................. GTGTTTTCGACGCGGGTGCGCCCCGATTTAGATAAT 25537 30 100.0 36 .............................. GAGATTCGCCGCCGGCATCCTGAGCTCGTGATGCAC 25603 30 100.0 33 .............................. GAACTGTCAGAGAGCGACGACCAGCGGGACTGT 25666 30 100.0 36 .............................. CTCCAGTTGATCGAGGTCGTCAATCGGGTGGAGTGA 25732 30 100.0 36 .............................. CCGCGATGAACAGAACGCCCCACAAGTCCTGACTCG 25798 30 100.0 36 .............................. CATCCCGATTTGATGAGCGTCCCTTCTCCAGTCACC 25864 30 100.0 33 .............................. CGCCTTGTCGTCACCAAATATCAGCAAATCCAC 25927 30 100.0 36 .............................. ATCGGCATCCCCCCGCGTTCTCGGGGCAGACAGGGA 25993 30 100.0 37 .............................. CCGGTCAGAGTCGTCAGGCTGCACCTCACCGAGACAT 26060 30 100.0 33 .............................. GTGGCTGCTCTGGTTTGGCTGGACACTGGTGTC 26123 30 100.0 35 .............................. TATTTCCGGGCCACCCCGGTCCGGCCCGGTCGTCG 26188 30 100.0 36 .............................. GAGGGTGAGGTCTATCGCTCCGTCCACGTCGAGAAA 26254 30 100.0 35 .............................. TTGATGTACTGCTTCGACCGCACCGCGCCGGTGTT 26319 30 100.0 36 .............................. ACGATCTCCTCGCAACGACGGAACCGAGGATCGGGT 26385 30 100.0 36 .............................. CCCCACCCTCCGCTTGACGTCCGTGGTGGTGCAAAA 26451 30 100.0 36 .............................. GTCCGGGAACGCCTCCTGGAAGTAGCGCGTGGCCTC 26517 30 100.0 34 .............................. ACCAACCGTTCGGCGATGGCGCGCTTGGCGCGTT 26581 30 100.0 36 .............................. GAGCGAGAATAGCGACGCCGCCGCCTCGCCCACTTC 26647 30 100.0 35 .............................. TGTGAACGAGATGGTCGCGGGTCCCGGCCGCGGCA 26712 30 100.0 36 .............................. GAGCCACCTCGACGAACGCTCGGGAATCGCTGGAAG 26778 30 100.0 35 .............................. ACGAATAGACGTACGGGGGCTTCAGGTAAATAGGT 26843 30 100.0 37 .............................. ATCCGCCACGAGGGGCAGACGGTCGCGCACCACCGAC 26910 30 100.0 36 .............................. GTCGAGCAGGTCGTCGACCTCCTCGGGGCGAAGCCA 26976 30 100.0 39 .............................. CTCGTCGGGAGCCATTTCCATCCCCTGCACCTTCGGGAT 27045 30 100.0 37 .............................. CCGAAAACGAGCAGGAACAGGTACGATACTCGATACA 27112 30 100.0 39 .............................. CTCGTCGGGAGCCATTTCCATCCCCTGCACCTTCGGGAT 27181 30 100.0 37 .............................. CCGAAAACGAGCAGGAACAGGTACGATACTCGATACA 27248 30 100.0 32 .............................. TTTCTGTCGGTGGCCCACGAGGTACTATAACC 27310 30 100.0 36 .............................. CAGGTGACGGCCACGAGAAAGCCCAGCACGTTCGCC 27376 30 100.0 40 .............................. CTCGTCCTGCCCCGCGACGGGGTGCTTCTCGAAGAGCCCG 27446 30 100.0 35 .............................. GCGGAAACGCTTACGCGGCATATGGAGCTGTTGCG 27511 30 100.0 35 .............................. TCACAATACGTTGCAGCTCTTGTCACTCTGCCATT 27576 30 100.0 35 .............................. GACGTCCAAGAGTCGTGGCCGGGCAAGATGCAGAC 27641 30 100.0 34 .............................. AATCAACATAAATCTATACGTCGTCAACTACGTT 27705 30 100.0 36 .............................. ATGGCTAATCACCGGGGGCGAGGTTGCAGGTGTGTT 27771 30 100.0 35 .............................. CATCGACCCGTCACATTCCACCGTGAGGGAGACGC 27836 30 100.0 34 .............................. GACCCTGAGCGTCCCGAGGTGGTCGTCTGATGCC 27900 30 100.0 37 .............................. TCAACTTCATCCCAGTCGTAGGTGACGGGGGCGCTCA 27967 30 100.0 35 .............................. AAGTGCGTATAGGCCATACTGCCTATCGTCGCTCT 28032 30 100.0 34 .............................. AACTTCGGCGCGGATGCGACCGACGCCCGCTATA 28096 30 100.0 35 .............................. ACCGCCGACGCTCCATTTGACCTTAAGCGCCACGA 28161 30 100.0 36 .............................. CCGCCACGTTCTGCCCCCCTTTGCGTCTTCGAGCCG 28227 30 100.0 35 .............................. GCATGAGAGACACCCGCGCACGTCGCCACGAGTTA 28292 30 100.0 36 .............................. TCGCGGGGCGTCCATCGAGTCGATGAGACCGTGTGC 28358 30 100.0 34 .............................. CAACTGCCGTATCAACGACGGACGAATTGAGATC 28422 30 100.0 36 .............................. TCGGGGAAGTGGTCCGCGACGAAGTCGGGGGCGCAC 28488 30 100.0 36 .............................. CGGCTCCGGCATCCCTCCCACATCGATGGGCGAGTC 28554 30 100.0 35 .............................. CGAGATACATCAACCCTGTCTCCGGGTTGAACAGG 28619 30 100.0 39 .............................. TCCATCGCCGACGCGTTGCCGTCCCCGAGCGTCGAGATG 28688 30 100.0 36 .............................. TCGAGGACGTCGGCTGGTAGCCCGCCGGTGGCAATT 28754 30 100.0 35 .............................. GTTGATACCGACCATAATACTATTGTGACGGGGCG 28819 30 100.0 35 .............................. CGCGTGCTCACCAACGGCGGCACCTGGCACGTCGC 28884 30 100.0 36 .............................. ACGTCGATGGAGTGGGTCGAGTTCGGCGCCCACGAG 28950 30 100.0 36 .............................. CGAGGGCCGCGACCGCCGCGGCCGCTCCGAGGCCGT 29016 30 100.0 37 .............................. GTCTTCGTTGCCGACCGTCTGGAGTTGCGAGCGCGCC 29083 30 100.0 34 .............................. ATCGTCCGTGACGACACGGAGGTCACTCGCGGCG 29147 30 100.0 36 .............................. CCACGGGGTCGGACGGGTCGATGTTGCCGCCCACGT 29213 30 100.0 36 .............................. TGGCACAACGTGGACGGCTACAAGTTCGTCCGCCAC 29279 30 100.0 35 .............................. ATGAAGTAGGAGAGCCTCCAGAAGACTGTTATCAA 29344 30 100.0 36 .............................. ACGACTGGACGAAAGCGGACTGCCGCGAATATCTCA 29410 30 100.0 35 .............................. TTCCAGGTGCTCTATCACATGAAGGGCATCAACCC 29475 30 100.0 36 .............................. CGTGTGCGGGCGACCAACTCGGCTGGCGATAGTGAT 29541 30 93.3 38 ................AC............ TTCGCGATTGCTGGTCTTGTGATGACCGGCTTGGTACA 29609 30 90.0 0 .............T.....CA......... | ========== ====== ====== ====== ============================== ======================================== ================== 68 30 99.8 36 GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Left flank : TAGAGCGAACTGTTGAACATCCATCGCTGAACCGAAAAGTTAGCTATCAATACCTCATGAGACTTGAAGCCTACAAACTGAAGAAACACCTACTCACTGGTGAGGAATACGATCCGTTCCAACGGTGGTGGTAACATGTACGTCGTGATGGTCTACGATTTGGAGGCCGACCGTACGCAGAAGGCCCTCAAGCTCGGCCGACGGTACTTGACCCATGTCCAGAACTCAGTACTCGAAGGTGAAATCTCAGAAGGCGATCTGGCGACGCTGAAAAACGAGGTCGATGACCTGCTAAATCCCGGTGAGTCAACAATCATCTATGAATTATCCTCCGATACACTTCTGAATCGAACGGTGTATGGCGACGATCCGACCGAAGACCAGCGATTTCTATAGCGAGTTCCGTCGACCCCCACGGGGAATACGGCCTATTGAGGGTTGACGGAAGCTCTTTACTGTATCTATGCGTTAGCAGGCGTATGCCCCCGAAATGTGGCATG # Right flank : CTTAGCCTCCGATACGTCCAGTAAGCCGCCGCAATAGATCTGCCAACTGATACAAGATAGAGAAATTGTTCCTACGACCTCGAGTACTCGCCGCATAGCTCACAGCGGTTGGGGATCCGATCACCTTATGTGTCATATGAAGGTTAATAAGGCGCAATTTGTTACATAAGGTATGGAGCAGCCATCACCGCCTGACTCTCTCCCGAAGTATCTCGCGGAGGGACTCCCGAAACAGAATACGGAGACGCTTCGAGAGATCCAATCCTACGTCAAGGCACTCATCAAGTATCGCGAACAGCCGGTTGACACCGACGAGCTTCCCGAGATAGCCGAACCCGTCGACGAGCCCGATGAGTCAGGGAAGGGAACTGTCGTCAAAGAGAAGGTCAAATGCGGCGACAACAGCTGCAAATGCGCCAGCGGGAATCCCCAAGATATGCACGGCCCGTACTTCTATCGCTACTATCGTGATAATGGAACGATGAAATCAGAGTACGTCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.10,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //