Array 1 181122-180056 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGGV01000033.1 Glycomyces xiaoerkulensis strain TRM 41368 Scaf33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 181121 29 100.0 32 ............................. CGGTACAAGGATTATGCCACATTGTATTATCA 181060 29 100.0 32 ............................. TCGGCATTGGCGTACGCGGCCATCTGGAGCGC 180999 29 96.6 32 ............................T ATCTGCCTATTCATGCCAGGTGTGTACTGGGA 180938 29 100.0 32 ............................. AATCCATAGGGCCATTAGGGCATACTCTCCCG 180877 29 100.0 32 ............................. CGTCGTCCTCAGCGGTGGGTCTGGCCTGCGCG 180816 29 100.0 32 ............................. GAATCGGCCGGGCGACGAGCATGCCGCACGAC 180755 29 100.0 32 ............................. CGGTGCAGGAGCGGCCCCCGGAACAGGCACTT 180694 29 100.0 32 ............................. CCAACGCTCGACGACATGACCAGGGGCCTGAT 180633 29 100.0 32 ............................. ACCGCCACCGCGGCCGGACACACCCGCACCCA 180572 29 100.0 32 ............................. GGGGAGTTCGTGGTCAACGCCGATGCGACCGC 180511 29 96.6 32 ............................G CTCTCGGGGCCGAGGTCGCCGATGTTGGAGAG 180450 29 100.0 32 ............................. GAGCGGATGCCCGAATCGATGATGCTCCCAAA 180389 29 100.0 32 ............................. TACCAGCATCGCAAGGCCCGCTCCCATGGCGG 180328 29 96.6 32 ............................G TCGAACACCACCATCGGGTTCTTGATGCCCAA 180267 29 100.0 32 ............................. CAGGAGGCGCCGTAGTCGGTGGCCTCCAGGCC 180206 29 100.0 32 ............................. ACCCGTACCCCTATCCGTGGACGTTTCGGCGG 180145 29 100.0 32 ............................. TGGTAGGCGGCGCGCTGCATCGCCGTGGGCAT 180084 29 89.7 0 ........................G..TT | ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.9 32 GTGCTCCCCGCGCAGGCGGGGATGATCCC # Left flank : GGACGAATACGACAAGGACGTCGTCGGAGGGGTGAACCACGGTGATCCGGCCGATGACGACGGTGAGTTCGAGGTGGACTTCTGATGACGGTTATCGTCCTGACCGCTTGTCCGGTGAGCCTGCGGGGCCATCTGACGCAATGGCTGCTGGAGATCTCGGCGGGGGTGTTCGTCGGGAAGGTGAGCAAGCGAGTGCGGGTGCGGCTGTGGGACAAGGTTCAAGAACTCGCCGGGCCAGGGCGTGCGCTGCTCGTCTATTCATCGAGAGGCGAGCAAGGTTTGAGTTTCGAGGTACACGACCATCATTGGGAGACCGTAGATCTCGACGGGCTGACGCTCATCAAGCGGCCTGCGGAGAAGAAGAGCACCGCCAAGCGGCAGCCGGGGTGGAGCAACGCATCGAAGCGACGACGGTTCGGCCGGAGGAGTCCTTTATAGATGGACGGTTCAAAGTGAATCCAGAATGAGGTGCTAGGCTACATACCAGCAGGTCAGCAAGT # Right flank : CAAAACGGGCGAAACTGGCTCATGGTATCGGTACTTTTCGTACCATTCCGGATGGAAGCGATACATCGGACCATTGACGTGAATGATCCGATCGCCGCCAACGGGAAGGATACCGGTGAAAGAATCCGCTCTGCGCCTGATCGCGGCCGCCTCGGCTGCGATGATGACGACCGCGCTGGCCGCCACGCCCGCCCAAGCCGAGTCATCGAACACCGACAGCATCGACTGGGGGTCGTGCCCCGGACCTGAAGACGAGACGGTCGAGTGCGCCACCATCAACGTCCCGCTCGACTACACCGCACCACGCGGTCAGACGATCGAGATCGGCCTCGCCCGCCGCCAGGCGGCCGACCCGAGCCGCAGGATGGGCTCGATCCTGATGGACCCCGGCGGTCCGGGCGGTTCCGGAGTCGCCTCCGTGCGGCAGGTCAACCCGCTGCCTCCTGCGGTCGCCGAACGGTTCGACATCGTCGGCTTCGACCCGCGCGGCGTCAACACCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCAGGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 191766-190882 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGGV01000033.1 Glycomyces xiaoerkulensis strain TRM 41368 Scaf33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 191765 29 96.6 32 ............................A TAAGAGACCGTGACGAGATTAGCTCCTGTATT 191704 29 100.0 32 ............................. TCGCGCATTTCCCGCATTTCCTCAGATTCCGA 191643 29 100.0 32 ............................. TTGGCTTCCACGAAATTGTTAATCGTCCAAGT 191582 29 100.0 32 ............................. CTGGCCGACGAGGTCGAGGCCCTCCGCGAGCG 191521 29 96.6 32 ............................G TACGTCGAGTGCGAGTTGGACACCTGGACGTC 191460 29 96.6 32 ............................G GAGTGGGCGCACGCGTTCTGGTTCACCGGGTC 191399 29 100.0 32 ............................. TTTGGAACGAGGCTGTTGGGGTGGGCGGGGTC 191338 29 100.0 32 ............................. TGCGCATCATCGCCCCGTCGGGGTTCACCGAT 191277 29 100.0 32 ............................. GGGTCGATGATCAGCAGCTCACCGCTAGCGTC 191216 29 100.0 32 ............................. TGGCACGACAGGAGGATCCTCACCGAGGAGCA 191155 29 100.0 32 ............................. CGGTGGTGCTATGTCACCGACTGGTCGACGGT 191094 29 100.0 32 ............................. GCGTCGAGGTCGTCGTTGATGAGCGTCTCCCA 191033 29 100.0 32 ............................. CTGGACCAGATCGAGCGGGTGTTCCCCGGTGC 190972 29 96.6 32 ...T......................... AGGCCGACCGAGGGCTCGTGGATCATCCGGTC 190911 29 75.9 0 ...G......T.....T.......G.GGT | T [190886] ========== ====== ====== ====== ============================= ================================ ================== 15 29 97.5 32 GTGCTCCCCGCGCAGGCGGGGATGATCCC # Left flank : GATCAGTTGCGCCACGGACGCAGTCGACCCGGCCTGGCTGGCGGCCGTCCTGACCGCCCGGCTGCCCAGCGCCGCCAAGCGCACCGCCACCGGCGCCAAACGCCGCATCCTCGCAGTCAAGCTCCCGCGCCTGCCGCTGGCCGAACAACGCCGCCGCGGCGCGGCCTTCGCCGAACTGCTGCACCTGCGCGACCGCCTCGAAACCGCCGGCGCCGAAGCCGCCGCGCTGGCCGGAGACGTAGCGACCGGCCTGGTCACCGGAGCGATCACCGTGGACGACGAAGGGGACGGAGAGAGCGGCGAGGTGGAATCTTGAACCGAGGGCCGCTGCCGTTGGCATGCGATGGCTACGCGGCCGACCCACGACGAACCGCACGCGCCATGCCCACTGCACAAACCAGCGGCCACGCCAAGGGCCGAGCAGTAGATCCATACCGGACAGTCTGGCGAGAGTGAATCTATTCGCCGGGATGCTAGGGTAAACTCACTGGTCAACAAGA # Right flank : GGCAGTCCGCAAATCGTGAGAACCGATAGAAGAACCCGGCCCCTGCGGCGGGCACCGGGTGGTATATGCGTCAAGTATGCAGCATTGTGAGCACATCGATAGCTCTGGGTCACGGTCCCTCTGGTTCCTGACCCGTCCCGGCGGACCCGGGAGCTGACTCGCGATCAGGCCCAGGGATCTTTCGCAACCACCAGTGGCGACAGCCTCTGAGTGTGGCCGCGTTGACGTTGGGATCCGCTGCTCGCAACGATTGCACTTGAGGTACGAGTACGCACTGCTCGGTCCGAATTGTGTAGCATTCGGACATGCCGCCCATCGCGCATGGGAAGGGAAGTGACCCCTGGGCCATCTGAGGGATATCAGACCCCGGGGGTCGCGCTGTATCGGCGGACCCTAACGGACTCGAACGTCGAGGACGCCACAACATTCGTTCAACCGTCGACGGCACGGGCTCGAATTCGATGCAGGGCAGGCGTTCCCCACGGGGACGGGGGTGACCC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCAGGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //