Array 1 6416-6620 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHXMD010000012.1 Helicobacter pylori strain SHZY47 contig_12, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
      6416	    28	 100.0	    32	............................	GTGTCGTTATTGAAGTTTAAACCTGTATTGTC	
      6476	    28	 100.0	    29	............................	TTGCTGTTTTCAAAAACAGATTGAGTGCT   	
      6533	    28	  96.4	    32	.......T....................	GCACTGTTGTTGAAGTTTAAGTTAGCGCTGTT	
      6593	    28	  75.0	     0	.G.G..TT.G.....G...........G	|                               	
==========	======	======	======	============================	================================	==================
         4	    28	  92.8	    31	ATTAAAGCTATAAGTCCCTTGATTGAAA	                                	       

# Left flank :   TCTAAACTTTGAGCGTCTTTTTTAATAGTGGTGTTTTGATTGTTGGTGTAGTTTGTATCACTGCTTGCGATCTTATTATCACTAGTAGCGTTATTTAAAGCGGTTTGGGAGCTAGTCAAGTCTTGTTGGTAGGTTGCTTGGGCTTTGGCTTGTAAATCGTCCCCTAAAAATTGGGTGGTAATGGACTGATTGTTAAAGGTTTCTTGTAAGGTTTCATCTTGCCCGTTAATGTCAAAGGTTACATCATAAGTGTTACTACCCACTTCAACATGGCTAATAGCTTTATCGCCCTTATAGTTGATCAAATCCCACAAATAGCTTTGATAAACCCCATATTGGATGGTTTTGTTTGTGGTGAGAATGTCATAGGTTTGATTGCTATTAAGGGTTTGATTGAGGTTAAAAATCGCATCAGAACCAAAAGACACACTGCCTTTAAGGCTAGCAAAAGGCGAACTTGAATTTAAAGTGTTAGCGCCTGAAAAATTCACCTTGCTTGC
# Right flank :  GTTCGTTTTGTCAAAAGAGAGATTGCTATTAGCCCCATTCCCACTGAAACTAAAGCCCCCATTGGTGTCATCTGTAAAGCTAGAGCCACTCACATTGATGTTAGAACCACTGAAATTCATGTAAGAGTGTTGCGTCCCTGCATCGCCGTTATCAAAGCTGGCTTGATTGATAGTGATATGGTTAGTTGCATTAAAATTGAGAGTGGCCCCACCGCCAGTAGAAAATGAGTTGCCGGTTGTGATACGGCTAGAATTAAAATTAATCGTTTGAGCATCATAAGTGCCTGTGATATACCCTAAATTACCCCCATTAACACCTGTGCCTCCAAAGCGGATATTCCCTCCCACATTAAGCGTGCCATTATTGAATTTTTGCGTGAAACTAGCCCCACCAGGGCTATAAGTGGTAAGGGTGTTTAAATAGTAAGTCCCAGAGCCTTGAGCGCTATTAAAAAGACAATAAGAGTTGTGTGTGGGGGAATTAGAACCGCTTTCAATAT

# Questionable array : NO	 Score: 5.50
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTAAAGCTATAAGTCCCTTGATTGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:71.43%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : NA
//