Array 1 10205-9214 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXT01000038.1 Heliophilum fasciatum strain DSM 11170 Ga0244663_138, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 10204 37 100.0 38 ..................................... CGCAAAGCCACCGTCACGCAAACAGGTTGCGACGGTTT 10129 37 100.0 38 ..................................... GACTTAGCGGGGCGCGAGTGCATCGCCGGCATTGACCT 10054 37 100.0 37 ..................................... AGGTTTTGATGGAGAAGTCCTTGCGGCCCTGGCTGTC 9980 37 100.0 37 ..................................... CCGCTGCACCACCAGCACATAATGACCAGGTTTGAAA 9906 37 100.0 36 ..................................... TGCCTGTTTTGTCTTGGTAGACGGCAATGATGGATT 9833 37 100.0 37 ..................................... ATGCTTTTTTATTACTGCTTTTATATGCCTTTTTGGT 9759 37 100.0 34 ..................................... AAGTAAACGATAATCTTACACGTTCCAATACTTA 9688 37 100.0 36 ..................................... TTGCACCAAATGGTTCTTCTAACATGCCACCACTTG 9615 37 100.0 38 ..................................... ATTTTTATATTATAATTATAGTATAAAACAATTATGAA 9540 37 100.0 35 ..................................... GGCGGGTGGGCTTGGTGACGGAGTTTATCGCTTTG 9468 37 100.0 36 ..................................... GTGTCTTCGACGGTCGGTCTTACCGTAAGGCTATCG 9395 37 100.0 37 ..................................... AGTGGATTCGTCATGCCGGGGCCGTCCAATCGCCTGA 9321 37 100.0 34 ..................................... AATCCAGCGTACTGGCATCATCCGCCGACAACGT 9250 37 97.3 0 .............A....................... | ========== ====== ====== ====== ===================================== ====================================== ================== 14 37 99.8 36 GTTGCAGTGAATGCCCCGATGGATAGGGGATTGAAAC # Left flank : ACTTGCATTAAATCATTTAGACTATCTTCGATTATTCTCTACTTACCAGATAACAAGTCAATTGCAAGGGTTAGAACTATGGAAACAATGGCGTTCTGAGTTAGGTATACCTGATGGGGAAGAGCGGTTGAAACGACTTTTCTCCACGATTAATTTATTTCCGGGTTAATAAGCATACGTCGGCCCCACTTTGGTATACAAGGTGGGGTTCTGAAGGTGTATTTTGACGTCTTATTCAAGGGTACTTGACGTACATGGGGAATAATATTGGCTTGATGTTTTTATGTGAATTGGGTAAAATAAAACTGGGTTTGATGGTATGTTTTGGTGAAGAAGCAAAGAGAGGCCATGGCATTAGATTTGGATAATGTTGGTGTTTTCGCAAGGGATGGTGGTTTTGAAGCGGTTTGAGGTGTTGCGAAAAAAAGAGGTTTTTTGGGGGTAGGTACAGGGTTAAAAAGCGTTGATTTTACTGAGCTTTTTGTTTGATCTCGGTTGCG # Right flank : ACTGTTTTCCTCCTGCGGGGCTGTCGTGGAGGTCGGGTGTTACTGCTAACGCATAATAGCCAAAACTTGACGATATAAAATGTCCACAAATTGCTGGATATATTGTCCAAAAAACAGGGGTGGCGTAAGCGCCTCCCCTGTTTTACTACACCGTCACCCGGTATCGATCTTTTGTCCGTAAATTGAATCTTGCTTCATTATAAATCACAACATACCACTGCGTATCCAACTCTAACCGACATGGCACGGAATGGGTGTAGATGAAAGTACTCCCCGCAATGAAGTCCATAATTCCGCTTCCCGATCAGAACCACCCAGCGATCTTGTTCGTGATCAAAGCTCATTTCTGCCGTATGGTTCATGCCAGTTCCCCCTGAATGACGAGCTTCACCATATGGTCATCAATGATTCGGCGCTGGTTCTGCGCACCGTAAAGCAGGCAATGGGTACATACCTTGTTGATCAACCGGGCAGCGCCACTGGAAAACCGGTAAATCTCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGTGAATGCCCCGATGGATAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : NA // Array 1 3166-4160 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXT01000039.1 Heliophilum fasciatum strain DSM 11170 Ga0244663_139, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 3166 36 100.0 39 .................................... GATATTACCCTCCATTTTATTATACTTTATATTAATATA 3241 36 100.0 35 .................................... ACTTAACGTTAAACCTGAGTCAGGGCTGAAGATTC 3312 36 100.0 37 .................................... ATTTAAAGGTTCATTAGGACGAAACTCGATACTACTA 3385 36 100.0 39 .................................... TACCCTACTTTTTAGTAGGGTAAAGCTCTTCCAGGGCCT 3460 36 100.0 39 .................................... CTTTTTTTTCGGATTTCATTCGAACTCCCCCTTAAATTT 3535 36 100.0 38 .................................... AATTTATTTTCTTGAAATATCAAGAAAAATGTGAGCAA 3609 36 100.0 38 .................................... AATTTGGCTGATGCTGCTATTCGAATACCTCGATTGGT 3683 36 100.0 38 .................................... ATGTCGCTGTCGGTGTTGTCCGTGTTGTCGCTGTCGGT 3757 36 100.0 36 .................................... ACATTTCATTCATGTCTAGAAAATTGATTGTAGGTT 3829 36 100.0 38 .................................... AATATATTTGTCTGTCCAAGCGTTGACTTGTTCCCGAC 3903 36 100.0 38 .................................... ATTTAAGTTCTATACTAGAATTATGAATAGTAGCTATT 3977 36 100.0 38 .................................... GTTTAACGTACCATTTGTGATTTTACTTTAAAGTAAAA 4051 36 100.0 39 .................................... CATTTGTGACTCTTTCTGAGCTGGAAGGATCAAAGAAGC 4126 35 97.2 0 ..............................-..... | ========== ====== ====== ====== ==================================== ======================================= ================== 14 36 99.8 38 GTTGGAGATCGCGTTGCTTCTTTGAGGCATGGGAAC # Left flank : CATGAGACGGCAGCACATACAAAAAACAAGCCCGCAAATAACCATTGATGATTTTATATTATCTTTTTTCAAGATAGATCAGCGCCGACAATTGCTGGGTGCTGTTGGCTTGTCAGCCTACATTAACCGCATGTACGACCGATTGTACGGGGAAAAGTCAAGGCAACGGTGGAGTTAGGTGCCAAAATCGCGTTCTGCCTGAAAACGGCGAAAGCCGGATCGAGAAGCTGGTCTGAGCTGTGATTGACAAAAGATGACATGGGATGGTACAATTCGCCTATATTACCTGACTTTTCGATGATCCGCTAACCTCAAAATCTTTAAAAAAGGCGGGGGGTTAGCGGATCGCAAAAAAGCCTGTAAGAATGCGGCTTTGCGGGCTTTGACGTTGCCAAAGCAGGGCAAAATCAGGTCAAAAACGACCTCCTAAACTGCGACTTTTTGGAGGTTAGCGTTTTTTGGTCCACAGCCCGCATGGGAGTAGGGCTGTAGGGCGCAGG # Right flank : CCCTTTGCTCGCGGGATATGTTTCCAGCGAGTTCATCTTTACTCAAGGCTCATTGAGCTTCTTCAAAACATACCAAATGGCACACTTCTAAACTTCGAAGTGTGCCATTTGACTTTATGTAGGGTTTTGTCATCACCTGAACCCCATTATCCAACTATCTGGGTTGCCGAATCATCCACATCGGCAACCCGTTAATTTTTTAAACCTGACAGCCTTCAAACTAAAGAACCGTGACAGGCTTCGTGCCATAATGCTGATGGTTTATCTATAATCGTTTATTAGCATGATGAAAAAATTGTTAATCACAAAGGAATTTCTTGTTTTTTGTTGAATAAGAACGAAAAAAATGCCATTCGATGATCAACGATGCTCTTCAAGAACCGATCGTTAAGGAGGGACATGATGTGAGCCATACCCTGTACGAGTTTACGGCCGAAGCGATCACACCGATGTATCTTTCCGGTAATGATATGCGGCGGTTTGACCTGCGGGCACCATCG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGAGATCGCGTTGCTTCTTTGAGGCATGGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 14197-13349 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXT01000040.1 Heliophilum fasciatum strain DSM 11170 Ga0244663_140, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 14196 36 100.0 37 .................................... ATTTTATTTCCCGCTCCCCACTCTGTTGCACCACAAG 14123 36 100.0 37 .................................... GTTCTCTTGCCACAATTTATTTTCTTGAAATATCAAG 14050 36 100.0 39 .................................... AACATTTACTCTTGCTATATATTTATTTGAATCATATGT 13975 36 100.0 40 .................................... CCTTGGTTACAACGATGTTAACATCATTAAAGTTAAACGA 13899 36 100.0 36 .................................... ACATACACCTCCTCTCTTCCATCAACCCACGCAAGG 13827 36 100.0 38 .................................... ATTCTTGTATCATGAACTATCGAAACTCTTTCTTCTTT 13753 36 100.0 35 .................................... ATCGACTGAAACTTACACTCCGTATATTCGATCTT 13682 36 100.0 37 .................................... ATAAGAAATCATCTTGTGCTACATCCAAGGACCATAC 13609 36 100.0 38 .................................... ATTTATATTCCTGAATTACTGAAGCTGCAATTCCTTTT 13535 36 100.0 39 .................................... TTCTGGGGAGGGGGTACAAATAATCTCTGGATTTGTAAC 13460 36 100.0 40 .................................... TTTTAGGGTTTAAGGTCAAAGGTTTGCCACCCCTAACCAA 13384 36 94.4 0 ................................A..T | ========== ====== ====== ====== ==================================== ======================================== ================== 12 36 99.5 38 GTTGAAGATTGCGTTGCTTCTTTGAGGCATGGGAAC # Left flank : ACGGCGGGCCATAAGCCGGTTCGGTGCAGTAAGTTGCAGGAGTGGTTGAAGGATCACTTGCCGGGGGTGCAATGTGCTTGTCCAGTGGCGGGACAGATCAAAACGCCGCATGATCTTTTGCGCGGAAAAACGAAGCCGGTGGTGGTGTTGCCGCAGGAGGATGCATGGGATCCTGTGGGGCTGGATCTGTTTGGTGGATGGGACGATGAAGTGGAGTAGGGTGGCCGATGGAGTGAGGTTGATTGACAGTTTGTGAGTGAAAACGGTATAATTCACCTATGTTGTTGGGAATTTCAATGATCCGCTAACCTCGAAAATGCCAAAAAAGGCGGGGGGTTAGCGGATCGCAAAAAAAGCCAGTAAGAATGCGGGTTTGCGGGTTTTTGGCATGGCAGGAAAAGGGGGAATCGGGGGCGAAATGGCGTTTGAACAGGTGCTTTTTTGGAGGTTAGCGTTTTTTGGCCCACAGCCCGCATGGGATTAGGGCTGTAGGACGCAGG # Right flank : TAAACCAAGGGTATTTCTTTAGCACGGCATGGTTTTGCAGAGGATAGAGTCAAGGTTCATGGTCTTAAATACTGCAACCGATGCCGTAGATTGTCTTAGCATTTGATTACAAGAAGACGATAGGAGATGAAGCAAGGTTTGCTGCTTTCCATGGTGTTTCGTTTGCAGGCCATGAACAATGCGTTTTTGCCGTTATCGCATGGAGCGATGGCGTATGCAGCGTTGCTGAAAATGATTGACCGTAGGAGTCCGGCGCTGGCTAAAGAAATTCATGATGTGCAAAGTGCCAAACCGATAACGGTTGCGCCGCTGCAAAGCGCGGGTATGGTACCAAGTCATCCGCATGTGCATATTGTTGCCGGCGAAGTGTTTACGTGGCGAGTGACGGCGTTGACTGCGAATGTGGCCGAAGAAATACAGCAAATGGTGCATTCAGTGGAGCGTGTTCAGATTGGGCAAGGCATCTTCCAGGTACTTGAGGTAGTAACATCATGGGCGGA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGATTGCGTTGCTTCTTTGAGGCATGGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 5447-9230 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXT01000026.1 Heliophilum fasciatum strain DSM 11170 Ga0244663_126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 5447 37 100.0 35 ..................................... TTTAATAATTACCGTATTATGATACCCCGACAATT 5519 37 100.0 36 ..................................... AGGTTGTGTTTTGCGAATTGATCGGCCTCGTTGAGG 5592 37 100.0 34 ..................................... AAAGCAGCGCTGATGAACGCCGGGCGGCGATCAA 5663 37 100.0 36 ..................................... GAAAACCTATACCAATCCTATCTCCAAGCCAGGAAA 5736 37 100.0 34 ..................................... TCGTAGTGGACCCATTTGGTACGGGAGGGGGTGG 5807 37 100.0 34 ..................................... TACACGATCGTGGAACTTAAAAAGACGGTAGACC 5878 37 100.0 36 ..................................... TCCGCTGGTTGCGTCACCGCTTCCGCTGGGGGCTGC 5951 37 100.0 37 ..................................... AATACACGGTAAGCGGCCCATTGGACCACCCTGTCCT 6025 37 100.0 34 ..................................... GACGCCCAAGTAGTCGAAAAAGTGATCGGGCTGC 6096 37 100.0 35 ..................................... ACATGAATTCCTCCATTAACCCCGCAGCCGGGACC 6168 37 100.0 34 ..................................... TGCACCTGGTAGACGGGGCCCGCTGGCTGCTGGT 6239 37 100.0 35 ..................................... CGACAAAGCAATACCCCCCACCCTTTCCGGGCAGG 6311 37 100.0 35 ..................................... CAAGGTAATCACCCTACCCCTTCATTTTACGTCCC 6383 37 100.0 37 ..................................... CGCACGCGGAATTGAAACCTAACCATCCATACTCAGG 6457 37 100.0 34 ..................................... ATCATGTTAGTTTGCCACCTCCGTGATGGTTTGT 6528 37 100.0 35 ..................................... GGCAAACGGATACCCCCCACCCTGCCCAGGATAGG 6600 37 100.0 35 ..................................... ACTGGTCGAAATCTGTCCTACTTCGTCAGGGTATA 6672 37 100.0 34 ..................................... TCACCCCCTGAATGAATATTTCCATCTACATACT 6743 37 100.0 36 ..................................... ACCCCCAAAGCAGCAGCCCCTTACAGCCTGATTCGT 6816 37 100.0 34 ..................................... CGTTGTCCCGTAATTGCTCTTTTTCCACCCCGTG 6887 37 100.0 36 ..................................... GATAGACGAATCAGGCGTACCTGTGCCAAGCGTTAA 6960 37 100.0 34 ..................................... TGTTATCACTAATGAAGGTTTTCAAATGGCCGAT 7031 37 100.0 36 ..................................... TTCATAACTCATGTTATCATACATATGGCAAGCACT 7104 37 100.0 36 ..................................... TTGACGTGGGGACGGTTGACGGTGCAGAAGTGATTG 7177 37 100.0 35 ..................................... AATTTAAGGGGATTTTATGTTTAGCCTGAGTCATC 7249 37 100.0 35 ..................................... CGTATCGATTGACTTTTCTGTGCTTGTATTCAACC 7321 37 100.0 35 ..................................... CCAAGAGAATCAAACAATGGTTTAAGTGCCAAATG 7393 37 100.0 38 ..................................... GCCTACCGCCTTGATGACAGCATCGCCGTAGCGACTGG 7468 37 100.0 35 ..................................... ATCACGCATCTTGATGTACCAGTCGGTGATGTCGC 7540 37 100.0 35 ..................................... AATACGCAGTAAGCCGCCCACTGGACCACCCTGTC 7612 37 100.0 36 ..................................... TTCCCAGCGGGGGCGGTAGATGATCCGCTGCTGCTT 7685 37 100.0 34 ..................................... CCCAAAGACGGCCACGGACTTTGCCCCGCTGATG 7756 37 100.0 31 ..................................... CGATTTCGTTCATCATCCTTCCACCTCCCGG 7824 37 100.0 35 ..................................... AGCTATGCGCCCAAACCGGGTGCAGACGAAATCAT 7896 37 100.0 35 ..................................... TACGCCGACGACGTGCTCAACGGACTATACGTGCC 7968 37 100.0 34 ..................................... GATAAAATTACTACCCGGAATCGCTACCCTGGCC 8039 37 100.0 35 ..................................... ACACTGGCGATATTGACGTCATCGGCGCCAAACGG 8111 37 100.0 35 ..................................... ACCCTCGATGATGACGAGGGGCTTTGTTGGGTCGC 8183 37 100.0 35 ..................................... AATTCCAAGCGAAGGCAATCCCACAGGAAGATCTC 8255 37 100.0 34 ..................................... CAGTTGCCGCCACGATACGGGAGTCGCTATCGGC 8326 37 100.0 35 ..................................... CGGAGCACCGGGAATTGAACAAGAACCGCATCAAA 8398 37 100.0 36 ..................................... ACGTCCGAGTTAATAACACTCCACTCGACGCCCTCG 8471 37 100.0 35 ..................................... AAGTTGAAGCAACTACCGAGTGGTGGCCGATTCCC 8543 37 100.0 37 ..................................... ATGGGGCTAGTATAGCTTATTACCGTAAATTTTTTTA 8617 37 100.0 35 ..................................... ACAGTACGGTTTACGCGCATCTTTGCATACTTGCC 8689 37 100.0 35 ..................................... TAGCGATGAAGAATCTTCCGATTTGGTTGTGGTTG 8761 37 94.6 35 .........G..........C................ TTCAGCACATCGATGAGCGTATGGCCGATTTTAAT 8833 37 91.9 36 .........G..........C...............T ACCCGAAGCGAGATCAAGATGGATTCCACGACTGCG 8906 37 97.3 35 .........G........................... AGCTACGGCGGCAACGAAAACGTCGAGGGCATGGC 8978 37 100.0 35 ..................................... ATTCCACGCAGAATGATAACGTTGTGCATTTTGGC 9050 37 100.0 36 ..................................... ACTGTCTGGTTCTCCAGTCCGGTTTTCGCCGTGATT 9123 37 100.0 34 ..................................... ACGTAATTCTCGACGCAAAGGTATCCCTCACTTT 9194 37 83.8 0 .........G..........C............GCTT | ========== ====== ====== ====== ===================================== ====================================== ================== 53 37 99.4 35 GTTGCACCCAGCTTGATTGCTGGGTGAGGATTGAAAC # Left flank : ATAGTAATTTCATGATGGGGTGATAGTATACAAATCTTAGTCACCTATGATGTATCAACAGATACACCGGAAGGGCGAAAACGGTTGCGTAAAGTGGCTCAGGCATGTAAGGATTTTGGTCAGCGTGTGCAAAAATCAGTATTTGAGTGTACAGTAAGTGAAGTTCAATATGAGCGATTTGTGCATAGATTGTTGGCACATATTGATAAAAAGGAAGACAGCTTACGCATCTATCGATTAAGAGAGCCAAAGGAAACCAGTGTAAGGGTTTATGGCATTGATTTGTATGTTAATTTTGAGGAGCCACTTGTTTTTTGATTGGTGCGCGAACCTATATCGCTAGGGAAATTATGGGGGGGTTCGCGAATGTGAAAAAAGATTGATGGGACAAGCATTGTAGAAAAAATAGCGAAGCAAAAAAGATTGAATTGTACGGTTCAACAAGTGGTTCGCGAAATTAACTTCTGGGGCACTGTTAGATCAGGGGATCCAGCCTCGGT # Right flank : TGAAAATATGCAACTCCAAAAATGATCGTAAAGCCGAATAATAAAAGGAACGAGCAGGAGAAGAGACGTGAAGAGAGAAAAAATGAAGAACGAACCTGAAAAAAGGCGCACAAAAACAGAGTCGCAAGGGTGAGAGTTTGCGGCCCTGAATTCCATGTGGGATGGGGATGTCGCTAGCTTCCGGTTCGTGGTTTGGGCGGGCGTCCCCGGCGACGAGGAAGGGGTTTTTCTCGATCGCTGGGACGCTCGTTTTTATCATGAGAAGAAGCTTCTTTCAAGGCGGATGCTTTTGACCGACTCTTTTGTGGCTTCATTTGTTCATGTTCATCATCCCCAAGTACCGACATCGTGTTCACCACCGTTTGAGACGAAGCCGGCAAACCGTCATGTTTAAGTTACATTCACAAAAGGCGGTGCACAAAGGGGGCTGCGGTGCAGTTTAAAACGCGCGCTCAATGGCCGCAAAATTCTCTTGCTAGTACGGTAATCATCCCTGATCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCAGCTTGATTGCTGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.40,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA // Array 2 11793-15151 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXT01000026.1 Heliophilum fasciatum strain DSM 11170 Ga0244663_126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 11793 37 100.0 37 ..................................... GAAGAATCCATGGTTGATAAAATCAAACGCATCAATG 11867 37 100.0 38 ..................................... TTTAGGCGCAACCGTTGAAATGGACGGTCAGAAACGAG 11942 37 100.0 35 ..................................... TTGCAAACACTCTCCTTATTCTGCTTTGACACATA 12014 37 100.0 38 ..................................... TTGCACAATTGAATTCTTTCTTAGACGAAACCGGCGTC 12089 37 100.0 35 ..................................... GCCGGACGTACCGCTTCCCGACTGGATTGAATTCG 12161 37 100.0 36 ..................................... TAGATGGTCTGGTTTAGGCTCTCTATTTTAGCTAAT 12234 37 100.0 37 ..................................... AACACTTCTTTGGCTCCCCGGTGATCCCTGATGACCT 12308 37 100.0 35 ..................................... CACATTTTTGAATCACTTTCCAAATCCCCCTTTCG 12380 37 100.0 37 ..................................... ATTAAAACAGATGAAGCATTTGTAATGCATATGTATC 12454 37 100.0 36 ..................................... GTATCTTCTTCTACAATTCCACCAATGATTTGCCCG 12527 37 100.0 36 ..................................... TTACTTATCCTTACTTACACCCAAACTTCTTCATCC 12600 37 100.0 36 ..................................... TTATCATAATTAACAACATATTCTGTTATTTCTACA 12673 37 100.0 37 ..................................... TTTGAAAGAACATTAAATGAAAACTTTAATCCATCAA 12747 37 100.0 38 ..................................... ATTGAAAGAATGCCGAATTTTTTAGCCAGCCATTTTAC 12822 37 100.0 36 ..................................... GTTTGATTCCGCGTGGAATAGTTGCGGGAGTGTATC 12895 37 100.0 37 ..................................... TTGAATACCTTATCGATAACATTATTCATTTCTTCCA 12969 37 100.0 36 ..................................... TCATAAACTATTCGATAATATTCATTATTTTTTACA 13042 37 100.0 36 ..................................... TACTTAACAAATAAGCGTTTCTTTAATCGCCTTATA 13115 37 100.0 36 ..................................... CGCCTTTTACAATATCCAAGAATAAATAATAGTCAA 13188 37 100.0 36 ..................................... TTTGTCCAATTTACTGTCTGTCCGCTATGGATTTTT 13261 37 100.0 38 ..................................... ATGTTGTGTTCTTATGTTCTCTGTTTCTGTACCCATTG 13336 37 100.0 34 ..................................... AACTAATATCTCGCCTGCCACGTACAGCTATGGC 13407 37 100.0 38 ..................................... AACGGTTGCAGACCGTTACTGACCGTTGCCAACCGTCC 13482 37 100.0 37 ..................................... CCCAAACCAATTCCAAAGCAATGGTCTGGGAAGTCCG 13556 37 100.0 34 ..................................... GTTAAATCATTAATTAATTCTTCTGTTAATTTAA 13627 37 100.0 37 ..................................... ACATCGGGATCGATGGTAGTAACTACAAGAAGTACGG 13701 37 100.0 38 ..................................... TGGCCTTTGACGGCCCCAAGCCCTTGATCATGCCGCTA 13776 37 100.0 38 ..................................... TGCGGAATCCGATGCTGACTTCTTTTTTGATGCCAGTA 13851 37 100.0 38 ..................................... TTAAAAAACAAGGATTCTGGCATACATCCAGAATCGAA 13926 37 100.0 37 ..................................... CGAACACGACGTCACCGTCTTCACCTTGCGACGGATC 14000 37 100.0 36 ..................................... ACAATACCGACAAACTTGCTGATTCCGTTAAAGAAA 14073 37 100.0 36 ..................................... AACAACTAATATAGTAGCGCAAGATTGCAAAATCAT 14146 37 100.0 37 ..................................... GGACAAAGCCTTGAGCCAAGCCCAATATGTCGAACTC 14220 37 100.0 38 ..................................... ACTGGTTTGGCTGAAAAGCGAAACGGCACCGTCGTCGA 14295 37 100.0 38 ..................................... ACACTTCTTCGTCTAAGGCATCCAGCGTCTCCTGATGC 14370 37 100.0 35 ..................................... GCTCCAACCCCGCGTCCACAACCTCGACCTTCGCG 14442 37 100.0 43 ..................................... CTGGCCTACTTATAACAATATCATGGACAACGTGGTTTTTCGT 14522 37 100.0 35 ..................................... TCGTTCAGGGCTTGGATAGGATCTGCTTTTTCTTC 14594 37 100.0 38 ..................................... TTTCTTTTTCGCACTGCCGCTGCCAGTTATCTTGTTTT 14669 37 100.0 36 ..................................... CGTACAGCCGGGCACCGATCAGCACCGGCGCAATGG 14742 37 100.0 40 ..................................... TTCACAAAGAATATCCTCGGCTCGCTGCTTTTCGTCGTCC 14819 37 100.0 36 ..................................... GTCTGCTTACTACGAAGTTCCCGTTCTCCTTACCTT 14892 37 100.0 37 ..................................... GCCCAACCCGGAGATGACCGCCTATACATGGGTGGAG 14966 37 100.0 38 ..................................... CGTACAGCGATCCGTCCACGCAGTATAGGCAAGAGCAC 15041 37 100.0 37 ..................................... CATGCAACCTTGTGGAATGCGTACCGATGATACCGGT 15115 37 89.2 0 ................................TTC.G | ========== ====== ====== ====== ===================================== =========================================== ================== 46 37 99.8 37 GTTGCAGTAGATGACCCGATGGATAGGGGATTGAAAC # Left flank : GATCCCTATACCCCGGCATGGAATATCTGGGTACCCGAGTAGCGATGCACGCTAATTCTTTTTTGCTGATCCCTTAGCCTCGAAAAACGGGTTGCTGTAATTGGCGGCCATCATTGTGCCGATGAGGTACATGGCATCGTCCGTTTTTTCCATATCCAGTGCTTCCGTGACGGCCCAAGCTGCGCGAGAGCGATCGAGCGGTTGCTTATCGCTTTCAAGCAGGCATCTCTCTTACAGTATCGCTTATCTTCATTGTAGCATACCAATCATTGCTTGATGTTTTAATGTGAGTTGGGTAAAATAAGGTTGATTTAATAGTAGGTTTTTGTGAAGCTACGAAGAGTGACCACGGTATTGGGCTTGGATGAACTTGGTATTTTCGCAAGAGATGGCGGTTTTGAAACGGTTTGGGGTGTTGCGAAAAAAGGAGGTTTTTTAAGGAGAGGTACAGGGTTGAAAAGCCTTGATTTTACTAAGTTTTTTGTTTGGCTTCGGTTGCG # Right flank : GTCGTGCAAAAAAATATTAAAAAACCCTTAGGATCCTATATATGGATTCTAAGGGTTTTTTAATACAATCTATTGACTATTGCATATTTTTTGGCATTATTAAGAAAAAACTATCCCCTAAAAACGGGTCACGGAGAAAAAGACATAGTATATTTTTTCAGTCCCGTATACCAGTGATTCCGGTCAGTAAATCCTGTTTATCATAACATAGCGCGAAATAATGGGCAAATAATTTAGAGAAAGTCATTGACAAAGATATACAACCGACATAGAATACAAATAATAGTGAGTATAATTTTAACCCAATATTCTATAACTTTATTAAAGGAGGTATGCCGTGAAACTTGACTTAGATTTTACATTCCGTAAACTTGTGCCAAGCGAACCATATCCTTTCCAACTGGAAGTAGCCAAACAGATCTTTGCCAATGAGCGCGTGATTTTACGTGCCCCAACAGGTGCCGGCAAAACGTGGACAGCCCTACTGCCTTTTCTGCATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGTAGATGACCCGATGGATAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 3 26876-28534 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXT01000026.1 Heliophilum fasciatum strain DSM 11170 Ga0244663_126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 26876 37 100.0 36 ..................................... GAATGTGATGTTGATTCTTCGGTAAACTGCCATTTC 26949 37 100.0 36 ..................................... TGGTTGTCACGGTTGGCAGCGGCGTTTCGATGGATG 27022 37 100.0 37 ..................................... GAATTAAGTAAGATACTAAAAACATGGAAAAGAAGAG 27096 37 100.0 35 ..................................... GATCGCTAAACGTGGGAAGCTGCTTCTTTGTCGAT 27168 37 100.0 39 ..................................... AGTTGGAATTGACCATCGGGACGACGGTAACCGCAAGCT 27244 37 100.0 37 ..................................... AATCACCCCCTATGATATTTGATTCAGATAAGTGACA 27318 37 100.0 38 ..................................... TGGGCAAGGGATTCCTTTGGCGGGTATAATATGTTCTT 27393 37 100.0 37 ..................................... ATACTGCATGGGGTTAGTAGCCCCAACAGTAGAATGG 27467 37 100.0 37 ..................................... TATCTTGTTCAACGAGGTAAGTTCAAAGACGTTAAAA 27541 37 100.0 35 ..................................... ATGAATCTCACTCAGCTAGCAAACATGCGTGAACA 27613 37 100.0 38 ..................................... CTAGTATCAACTTTTGCAAGCGAAATTAAATCGCCTTC 27688 37 100.0 35 ..................................... CTTTGTGCCCTGCCGCTTCGAGAAGCGCTAATGCC 27760 37 100.0 36 ..................................... GGAGACCGACAAGGGAATCACCGTCACCGTCAACAA 27833 37 100.0 38 ..................................... TTTTTACCGGGGAAGATTGTGGTGCAGCGGGGTTTTGG 27908 37 100.0 37 ..................................... CTTCTTTGAGCGCCGCCGGGACTTGAGCATATGTTTT 27982 37 100.0 38 ..................................... GTCGCTTGGTTCACTATGAACACGATGGCCGATTGTAC 28057 37 100.0 35 ..................................... TGCTTGATGCACCGAGCATCGTCACCACTCAACCA 28129 37 100.0 37 ..................................... TTGCGCTGCTGTATCTCGCCTTGCTCGGCTAAGTCAA 28203 37 100.0 35 ..................................... CTTTACTTTCCTGCCTTGCTTGGCTGAACGACTTC 28275 37 100.0 37 ..................................... TGATAGTGGACTGCCTCTTTGCCAAAGTCGTTGTCAT 28349 37 100.0 38 ..................................... CCCAAGGCTTCCCACAAACGTATGTGATCGATCGCGAT 28424 37 100.0 37 ..................................... AATCGCTTTGCTAAGGCATGATCGATTAAGGCTTGAT 28498 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 23 37 100.0 37 GTTGCAGTAGATGACCCGATGGATAGGGGATTGAAAC # Left flank : GATGGAAGCGATGTATGAGTTTCCGGTCAATGTGGGTTGTGTGGTGTATGTGAGCTTTGCCGGCGATCGGGTGCGGGTGCAGCGGGATATTCATTTGATCAATGATGAACTGCGGCAGTGGTTTATTGAGGCGCGGGATACGAAGGCGCGGCTGGTGGCGGAGGAACTGGATCCGGGGATGGCGAAGGAGTGCCAGAAAGATTGTCCCTATGCGGGGCGGTGTAAGGGAGGGGAAGCGTGAATTTTGTCGATAATGTGTAATGGGGCAGCTTGATGTTTATGGGAGGAGTAGGTAAAATAGTGATACGGTTGCTTTTCTTTTTACTGGGGTGGGGTTGGTGCCCGCGGATACGGTTTGATAGTGGAGTATCTTGGCATTTTCGCAAGAGATGGTGGTTTTGAAGCGGTTTGGGGTGTTGCGAAAAATGATTGGTTTTTTGGTGAGGGGGAAGGTCGGGGAAGCCTTGATTTAGCTGGGGTTTGGCGGAGGGATCGGTTGC # Right flank : CGAACTAATGCCCCATCAGGCAACTTTTACCCGTTTTTGAAGGCGTAAAATCTCTTGAGATTTGGCATTTTTATTTCGCCAGCGTAGGTAGGATTGAATCGCATCAGCTAACGCTGCATGATCAGGATAATCCGAGCCCGACAGCACAAAATGCCGTAAGGGCGCAAAGTGGCACTCGATCCGATTGAGCCACGATGAGTAGGTTGGTGTAAAGACAAGTTCCACGTTGTTTTGCTCGGCCCATTCACGAACAAGCTTCGTTTTGTGGGGCGAAAAGTTATCAAGAATGATATACAACCGTTCGGAACGATGAAACCGACGTCGTAGTACCTTGAGGAACGCAAGAAACTCTTTACTGGTTTTTCGTAAGTGATTATGCCCATAAAGCTTATCACCCTTGAGATCATAGGCAGCCAAAAGATGTCGAACCCCGTGCGTTCGACTGTAATCGGCGCGACGGCGCTGGGGTTTTCCTTTTGGAAACCAGCCTTTGCCGGGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGTAGATGACCCGATGGATAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 4 35154-38271 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLXT01000026.1 Heliophilum fasciatum strain DSM 11170 Ga0244663_126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 35154 37 100.0 36 ..................................... GAACCTAAACCGGATGCGCGCCTTCAAGCGTGCCTA 35227 37 100.0 38 ..................................... AATGGTGTGATTGTACTTGGAGGCGGGAAGTATGCTGC 35302 37 100.0 36 ..................................... AACGAAGGTTTGTTGCGCCGCTGTCGACCTTTGTCG 35375 37 100.0 37 ..................................... AGAATGATGAATTTGTGATCAGCTACGATCGCGGCGA 35449 37 100.0 37 ..................................... TTTCCAGTATCACCTGGTTGGCCAGTGCTTGCTCCGC 35523 37 100.0 37 ..................................... TCTTGAATACGATAACTGCCTAACTTTAATGTGATTG 35597 37 100.0 36 ..................................... TCCAGGCATGGATCTCGTCCATCAGCGCGCCGTGGA 35670 37 100.0 37 ..................................... ACGGGGTGCGGGATGTGGCCGGGGTGGAGCGAGTACG 35744 37 100.0 36 ..................................... TTCCATATACTCCAAGCCTTTTTCCTCAACATACTT 35817 37 100.0 36 ..................................... CAACAAACGCCTTCTTCATCAATGGCACCGAGTATT 35890 37 100.0 35 ..................................... AAGGGGATTTCTTGATTGCCATTGCCGCCCTTTCT 35962 37 100.0 35 ..................................... TGTTGGATATTCAAAGATGAAATTCATCAATTCCC 36034 37 100.0 38 ..................................... TATTTTTTATGAAAATCAGTATGAATATCTTTTGTCAA 36109 37 100.0 36 ..................................... GATAATAAATTAACTGTATTTTATCTTGTCGATGAA 36182 37 100.0 38 ..................................... GTGCCCAGAAGGGGTATTTGGGGGTTTGTCCCACTGAC 36257 37 100.0 35 ..................................... CGGATTACCCGGATTGCGATGAATAAGCAAGAAGC 36329 37 100.0 37 ..................................... TTGTTGAATGCTTGTTGCAGCGGTCGGTAGGTATTGG 36403 37 100.0 37 ..................................... TCGCAAAGCCCTGTACTGTGATTATTTCCGTAGGTAA 36477 37 100.0 36 ..................................... ATCGCGAAGTTGTTGACGTTCACGTTCGTTGGTATC 36550 37 100.0 36 ..................................... AAGAAGAATATGAACTGATCCATGAACGTCTCCAAT 36623 37 100.0 37 ..................................... TTGGTTGCGCCCCTTGATCGGGCGAATGTTTTCGTTT 36697 37 100.0 36 ..................................... CTTTCCATGCTAGGACAGCCACAAGCTCCCAACCGG 36770 37 100.0 35 ..................................... ATTGCCGTGCTGCCGCCCAAGAGGCCCGGATTGCC 36842 37 100.0 36 ..................................... GGGCGGAACTCGGGTTAAAGCCTGACTATACACTGG 36915 37 100.0 35 ..................................... TTCTATCATACAAATCTACCTTTTTTACTACCATG 36987 37 100.0 36 ..................................... AATCTTGATTCGTCAGCTTATCCTTCTCCGTGTGGA 37060 37 100.0 35 ..................................... TGGAAAACCTCGGCGGGATTCGCAAACGGGAGAAA 37132 37 100.0 36 ..................................... TCTCTTTTTTCTCGGTGTCCCGACGAATCCTAGAGC 37205 37 100.0 36 ..................................... GAAGCAAAGGCAAGATAACGGGGATCCAGTTCCCAA 37278 37 100.0 36 ..................................... TTACGATCGATTGGTCGTACAAGTCTTTGCCGTTTT 37351 37 100.0 37 ..................................... GAGTGATCGCATCAAGGCGAGTGTGGCGCCGGGCGTG 37425 37 100.0 37 ..................................... CGACATATACGATTAACAGCACGACCGGCGCTGTAAC 37499 37 100.0 37 ..................................... ACACAATCCTTTGGCAGTTACTTTATGTTCGCATCCA 37573 37 100.0 36 ..................................... GTTCAGGACTCCATTCAGTGTTTTTATCACCGTCGC 37646 37 100.0 37 ..................................... TATCCGCAGGGAGCAACGCGCTTACAGGGTTGCGAAT 37720 37 100.0 36 ..................................... CCGTTGTCTTGGCCGGCGCGCCCGTTGTTGGCGACA 37793 37 100.0 38 ..................................... TGTGATTAAAGTCAAGCGCTTCCCGATTCGCGTCGGCG 37868 37 100.0 35 ..................................... CTGCAATATTGCGCTCCTTGGGAAGCATCTTTAGG 37940 37 100.0 37 ..................................... AGCCTTACTGCATGTTCAGCGATCATATTTCCTTTCA 38014 37 100.0 36 ..................................... TCGAAAGGAGCGGTAGCGATGACAGTACTGGGATTA 38087 37 100.0 36 ..................................... TGGTGGATCTTGGGGAGCAGGAGTTGTTGGGGCTGT 38160 37 100.0 38 ..................................... TGAGAGCCTTCTCCACGAGGCGTTCGACGCAGATGTAG 38235 37 86.5 0 ................................ATCTT | ========== ====== ====== ====== ===================================== ====================================== ================== 43 37 99.7 36 GTTACAGTGGATGACCCGATGAAAAGGGGATTGAAAC # Left flank : GGGATATTCGCTTGTATATAAAGGCTTTGCAAGAGCGGGATTTGAATTTGGAACGTAATGTTCGGCCGATTCTGGCGGCAATCAATGAAGGGCTGAATTGTATTAAATAACTCTTCTGCGGAACCCCTCTTTTAGCCGTATTGGCTACGAGTTTTTGCCCTTTTTACGGCTAGGTGAATGGATTCATGTCGGGAAAGGAACCGTCTTTGGCATGGGACGTATGCGAATTGCCGTTGTGGGGAAATGAACAAGGAAAGGGGAGGGATTGATGTTTAGGTATGGAATGGGTAGAATATTGACGTGAGCTTATTTGAATCCCCAGTTAGGGATACGACGAGGGATAGCAAGGCTGGATTCCAGCTGGATGATTCTAGCATTTTCGCAAGGGATGGCGGTTTTTTAACGGTTTGATGCCTTGCGAAAAATCGTCGGTATTTGGACGGTGCAGTAAAGCCGGAAAGCCTTGATTTTGCTGGGTTTTTTGTTTGAGTACAGTTGCG # Right flank : TAGGTGTTAAAGAAGGTCTAGTCTTATACCGGTTTCTAATTTCATATCGAGGTTCCTTTAAGAGTAGAAAGAAAGACCCTAGTATTCTCATCGTAATGAATACTAGGGTCTTTTTTTATGGTTTTAAATACCATGTATGCTTATCAGAAAAGAGTTATCCAATCTTGAACGACCAGTTTTAGCAACGTATCTACCCCCTGGAATTTAACGAGAACTTAATCAAGAATTGTTGAAGGGGGTAACTTTTTGGCAGCTAGAAGAAGGTTTTTGGAATAAAACGTAGAATCCATAAAAGGTTTTTTTTGAGAATTAGAAACGTTTTAGGGGGAAGCCGATTGCGTAGATGTCGATGTGCTAGGAGATTTTCGAAAAGTTTGATGAATCACGAGAAACATCTTGGCCATAACGTAGTTCACTTAATTTATCCCATACTGGTTTCGTCAACACAAAAGTTGACCACCTGCGCTAGAGCAAAAGTTGACCGGCCCCTGATTTGCCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGTGGATGACCCGATGAAAAGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //