Array 1 696727-695980 **** Predicted by CRISPRDetect 2.4 *** >NC_008789.1 Halorhodospira halophila SL1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 696726 36 100.0 36 .................................... TAGGTCTCCGGGTCGTAGGGTAGGCGAACAAACTCT 696654 36 100.0 35 .................................... ACCTGACGGATGACCAACATGCTCACCGTGTTTTG 696583 36 100.0 38 .................................... GAAGTGGCCATCGACACCGACCTCCATGCTCCCACCAA 696509 36 100.0 34 .................................... AAAGTGGGATCGCTCGGCCGCCCGAGGTCCACGA 696439 36 100.0 35 .................................... GGCTTCGGTAAGGCTGGGTTGACTGACAAGCATGG 696368 36 100.0 35 .................................... GGCGGTACTTTGGGTTCCCTTGCCGTTCATGCCGG 696297 36 100.0 34 .................................... ACCGAGCAGCGTTCGAGCACTGAGCCACTGGTAC 696227 36 100.0 35 .................................... GGCTTCGGTAAGGCTGGGTTGACTGACAAGCATGG 696156 36 100.0 35 .................................... GGCGGTACTTTGGGTTCCCTTGCCGTTCATGCCGG 696085 36 100.0 34 .................................... ACCGAGCAGCGTTCGAGCACTGAGCCACTGGTAC 696015 36 88.9 0 ...............................GT.GA | ========== ====== ====== ====== ==================================== ====================================== ================== 11 36 99.0 35 GTCCGAACCTAGCCCTGTTGGAAAAGGGATTAAGAC # Left flank : TGCGCCCACCACGGCGCCCAAACTATTCCCGAGGCGTAGCATGTGCACGGAGTTTGAGCTGCTGATCCGCAAGCAGGCCCGCGCCCAGGGGCGCTCCCTGTCCGAGGTCGCTCGCCGGGCTGGAGTTAGTCGCCAGTGGCTCTATGACCTCTGCCGCTGCCGAGCGAATCCTACGGTCTATACGATCGCGGAATTAGCCAAGGCGCTGAGGTTGCCCCCAATCCGCTTAATCGAGGCGTATTTCGCCTGCTTTGAGGAAGGCGAACACCATCGCTGACTTTGCCCAGACCCCGATGCTGGAAGCCGGGCACAGCAAGCTTGCCGCCCCTGGCGTATGCTTTAGCTGCTGTTATATGATCAGATGTTGCGCCAATGGAGCGGGCTCTTTGTCAAATAGGAATAAGGTGCGGATGAGAGGTGCTCATAACTCCGCGGGTCCCGCGATTTGCGGTAACCCCCTTCGTAACCCCATGATCAGAAAGGCTTTATGGGGCCGAGGA # Right flank : GTTGATCCGCTTCCGTGGAGACCTTGATGCTTTGGTAAAAGGAGGTTTCCACGATGCCCAGAACCCGACCGCCTTACACGCAGGCGTTTCGCCAGCAGATGATTGATCTTGTCCGCTCAGGGCGCACGCCTTCGGAACTAGCTCAGGAGTTTGAGCCGACCGCTCAGACCATCACCAACGGGGTCGCCCAGGCAGACCGCGACGCTGGCAAGCGCACGGACGGTCCGACCAGCGAGCAAAACGAGGAGCTCAAGCGGCTGCGAGCCGAGAATAAGCGGCTGCGCGAAGAGCGGGAGATTCTGTCAAAAGCCGCGGCCTGGTTCGCTCGGGAGACCGACGCGAAGTCCAGCGGATCTTCGAGTTCGTCGAAGTGAATCGGGCCTATTACAGCACTGCCACGCTTTGCGGGGTACTGGGCGTCTCCCCCAGCGGTTTCTACGCGTGGCGCAATCGCGGCCGCTCAGTCCGTGCGGCGACAGACGCCGCTCTGACGGAGCGGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAACCTAGCCCTGTTGGAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 2 715238-714989 **** Predicted by CRISPRDetect 2.4 *** >NC_008789.1 Halorhodospira halophila SL1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 715237 36 100.0 35 .................................... CTCCCAACGGGGCCACTCTTTCCGGAGTGTCCCTT 715166 36 100.0 34 .................................... GGGACTCCTCCTCCTTGATCTCCTTGCCAAGCTC 715096 36 100.0 37 .................................... TCGCCGAGGACCTCGATGATGGCCTTAGCCTCTTCTT 715023 35 86.1 0 ........................G...-...G.TT | ========== ====== ====== ====== ==================================== ===================================== ================== 4 36 96.5 36 GTCCGAACCTAGCCCTGTTGGAAAAGGGATTAAGAC # Left flank : TCGGTACGCCAGCGATTGCGGAGAACGGCGATGTCCACGGCGCTTGAGTTGCTCATCCGCAAGCAGGCCCGCGCCCGTGGGCTCTCGCTCTCCGAAGTGGCCCGCCGGGCAGGGATCAGTCGCCAGAGTCTCTACGACCTTTGTCGCTGTCGGGCCAACCCAACGATCTACACGATCGCGGATCTGGCTAAAGCGCTTGAGTTGCGGCCGCTCCTCCTGATCAGGGTGTATTTCGCCTGCGTCGAGCGAGGCGAGCGCGATGACTGAGCTTCGTGCCCGCGGCCTTGCGCCGTGGGCGAGCAGTTGAGCCGCCATGGGCGTACACCCCTGGCTGACGGCTGCCCATTTGCTTTAGAATCTCAGTGAGGTAGGCAGATCACGATCATTTTACAAATGAGAATAATGTGCGGATGAGAGGCAATCATAACTCGCAGGATTCCGCGATTCTCGCTAACACCCTTTGTAACGCGCTGATAATAAAGGGCGTACAGAGTCGAGGA # Right flank : CCTAAATTCTCCCGCGGAGTCCTTGGAGGGAGGCTTTTCGATCTGAGTTCCGAAGCCATCCTCTGGTGCATGGGCAAGAACGGAAGGGTGGGGATCCAGTAGCGGTGCCAAGGGATTTAGCTGGATGCGGTCGGAAGGCGGTCTCGGAGTTGCTGCTACGAGCGCCTTCGACGGGGTAAAAAAAAGCCCCGAAAGCACTGGGGTCCCGGGTCCTTTGTGCTGGTCCATGGAGAAATCTTTTTGGTAAATCGGGTGGGGTGCTAGGACAGCGGGACGGGAAAGTGAAAAATCATGCGGACGGGTCATCCAGGGAGGGCCTTCCATGGCCCTGAAAAAATTATTCCTTGCTCTTAGTCATCGAAGGGGCTGGAGGATCCGCCAACGCCCCAGTCGTCGTCCAGGCCGGAAAACCCGCCAGACAGCCGGCTATGATCGATATCATCATTGAATGGAGATGGGGTGCCATCGTCAGCTAGTCCCGTATGCCCATGCTCGGGCCC # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAACCTAGCCCTGTTGGAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //