Array 1 365129-365829 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNTJ01000003.1 Klebsiella grimontii strain 700466-17 700466-17_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 365129 29 100.0 32 ............................. GGGACCAAAGAGGACCCGTTCTGGCAGGGCTC 365190 29 100.0 32 ............................. CGATCCACTTTCTCACCGCTGAGCAAAAAGAA 365251 29 100.0 32 ............................. CCCGTGCGCTTCATCACCTCCCGCATGCGCAA 365312 29 100.0 32 ............................. AAACGACGGGGAGATCCACATTGCATAGGCGT 365373 29 100.0 32 ............................. TTCTTTTGAGCAATACTACCTGAACCGTAAGG 365434 29 100.0 32 ............................. GGAGCATTTAAAAATCTGCTGCTGCACGCGCC 365495 29 100.0 33 ............................. AAATCCGCAGCCGCCGCGAAGTCGTTCGCGTGT 365557 29 100.0 32 ............................. GTGATATCCCTTACCCAGGCTTCAAAAAGTTG 365618 29 100.0 32 ............................. TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 365679 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 365740 29 96.6 32 .............T............... AACAGCCCACAAAACTTTTTGCATGGAGCCGC 365801 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 12 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTCTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 166265-164955 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNTJ01000004.1 Klebsiella grimontii strain 700466-17 700466-17_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 166264 29 100.0 32 ............................. TGTCGCTGCGTTTCATCCGCCTTCGGGTTCAG 166203 29 100.0 32 ............................. CTCGCGTTATTATTCATGAGACGTTAGCGCAA 166142 29 100.0 32 ............................. CGCGGTTACTGTCTGATGTAGCCTACCCGGCG 166081 29 100.0 32 ............................. TTCAGTTTAACGAGAATAAAGCCAGTGTGGCC 166020 29 100.0 32 ............................. GTAAACGGGACAACCTCGCCGGGCATCTTTGC 165959 29 100.0 32 ............................. CTGTCGAACTCAAATAGTATTTTTGCGGTATA 165898 29 100.0 32 ............................. TCCCGGCGGTAACGCACCCACAACCTGATTGT 165837 29 100.0 32 ............................. CTCGCCCACCACAGTTGCGCGAACGATGATCC 165776 29 100.0 32 ............................. CCCGCAGGTTACGGGCGAGGCGGTGAGGGTTG 165715 29 100.0 32 ............................. ACAGGCGCGACAAAACATCGTCATGAGGAACC 165654 29 100.0 32 ............................. ACCTGACCAAGCCCAAACAGCCTGAAGTTTCA 165593 29 100.0 32 ............................. GGGAAAACGGCGTGAGCGAATTAATCGACGAG 165532 29 96.6 32 ............................T CCCGCAACCGGGCTACATTTTCAGCTATGCAG 165471 29 100.0 32 ............................. GTTCCGCGCCGATATCAACAGAAACGCAGATT 165410 29 100.0 32 ............................. AAGACATGTCGAAGGTCATGTCCTGCGCCGCC 165349 29 100.0 32 ............................. GTGCCTGTCACTAACAAAACCAGCAGGCCTAT 165288 29 100.0 32 ............................. GCGTTACCGCGACAAACACGGCAGTAACCAGC 165227 29 100.0 32 ............................. GATATTCCCCATATACCACGGATAGCCGACAA 165166 29 100.0 32 ............................. CCTGAGTGAATGCCTGTGCGTACTCAACCGTA 165105 29 100.0 32 ............................. CCGGCGGTAATCTTTGCGTTGCACTTGATAGT 165044 29 100.0 32 ............................. ACGCGTGGCGGTGTTCGCACTGAAAAATTGTG 164983 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.8 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTCAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTAATATTCTATTAAATTTAATCAGTTAGGTAGTGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //