Array 1 64544-66496 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMYU010000010.1 Fibrella sp. HMF5036 10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 64544 30 100.0 37 .............................. CCCGTCACGCCCGGTTTCTGCACGGTAAGCTGACTCG 64611 30 100.0 36 .............................. AGGCTAAGGCCTCGTTGCCCACCCGGCCCATCATGG 64677 30 100.0 37 .............................. TTCGCCGGGCACGTCAAATAAGATGCCTTCGGTAAAG 64744 30 100.0 37 .............................. GAAGCAGTGTAGGGGACACATTAGAGATACTGGCAAG 64811 30 100.0 37 .............................. TTTTCACGTCAATGATGATCTGACCGTCTCAATCCCC 64878 30 100.0 36 .............................. TTTTCACCCCACCCCAACCCGGCTTTCTGCCCCGGT 64944 30 100.0 37 .............................. GGGCCACCGGGGGGTGGTTGACGGGCTTGGGGGCTAC 65011 30 100.0 37 .............................. AGACGTTGCTGTTGTAGATGTCAAAGAGCTGCTGGCT 65078 30 100.0 37 .............................. ATGTGAGGGGGGAGGCCTGGGTTACCCGGCCCAGACC 65145 30 100.0 36 .............................. GGGCCTACGCATTGGCGGGTAGTGCTGAGTGTGGGT 65211 30 100.0 35 .............................. GGCTAATGGCCCGCTGGTGCCGATGGTGATGCTGT 65276 30 100.0 38 .............................. GCATCTATGACTACACGAAAACGTCGTATTACGACCTG 65344 30 100.0 37 .............................. AAGAGTGGGACCAAAAGGCCCAGAAGGCCAGGGGCAA 65411 30 100.0 36 .............................. TCGGTTTCGTAGGTGGTCGTCACGCCCGCAATCGTC 65477 30 96.7 35 .............................T TAGCGTAACCCGCCCTGTTCCACGGCCCCGCCGTG 65542 30 96.7 37 .............................T TCACCTTTTTGGGTGTTGCCCAAATCCCTCCTACCCT 65609 30 96.7 35 .............................T CCCGTTGACCCGCATGGCAATGAGGTACAGCCGCA 65674 30 96.7 38 .............................T GTATACAGGGCCGTTTTGGTGATGCGGACGTGGAGATA 65742 30 96.7 38 .............................T AAGCGCGGTTGATGATGATGTTGAAAAAGAAGCTCAAA 65810 30 96.7 38 .............................T ATTTTCACGCCACGGGTTTTTCAGGCATCGGCACGGCG 65878 30 96.7 34 .............................T TTCCTGACCCGGTTGCCTGGCCTCCTCTGGCGAT 65942 30 96.7 37 .............................T ACGATGGTCCGGCCTTGCAGGTGTTGCTCAACGCGGG 66009 30 86.7 36 .AA.......C..................T ATGGTCTATGGCTTTAAGCTCTATGTGCGCTCCAGC 66075 30 86.7 34 .AA.......C..................T GTTAAATCTTCGACTTTATCAACGAACTGGCAGG 66139 30 86.7 36 .AA.......C..................T CCGTCCAGAGCTGAATGGTCGTGTTGGAGAAAATCA 66205 30 86.7 36 .AA.......C..................T TGGTTGAGTCGTTTCAGTGCCGTATAGGGTACGGTT 66271 30 86.7 37 .AA.......C..................T CAGAAAAACGGGAACATTCACTTTCACATTCTCGTAG 66338 30 90.0 34 .AA..........................T AAGGGGGTGTATTACATCGCTGATTTTCAGTACG 66402 30 90.0 35 .GA..........................T TTCCGAAAGCTGGCTATTCCCGACTTCGCGCTCGA 66467 30 80.0 0 .AA...........C..AC........T.. | ========== ====== ====== ====== ============================== ====================================== ================== 30 30 95.6 36 CTTTTAATCGTACCTGAGAGGAATTGAAAC # Left flank : ATGGGGCTATGTATGTGATTCTGGTGTATGATATGGGGCAAAAGCGCGTGGGCAAGATGCTGAAGCTGTGCAGACGCTATTTGAACTGGATTCAGAATTCGGTGTTCGAGGGCGAGATGACGGAGGTACAGCTAAACGAATTGCTGCACGCGGCGAAGGGCATTATGAACGAGGGCGAGGATAGTTTGATCCTGTTTAAAAATCGGGATCAGAAGTGGCTCGACAAGCAGATTGTAGGCGTTGAGCGGCAGTCGACCGATAATTTTTTGTAGGGCTGTCGGGGGCGAGTAGTCGTCGGTCGGCTGCGATTGGTCTTTGACATCTTGGCATTAGGACAGCACAATAGCCAGTCATACGAGCTAATCTACTGATAGACAGCACGTCGTCGATCGCCGGGGGTTTTCGTACTACCGGTGATCGACGCTTTTTTACGGTGTGCAGGGCGCATAAAAACGCCCTTCAGGGCTTGAAAAGCCCTTTTTTCAGCCGCATTTTTACGG # Right flank : CATGAATACCTCTTGTCCAGCATCTAACGTCCAAAATCCAACGTCTGCCCTCTTCTAGCTACCCTCCATTCGCCAACCGGCACTCCAGGAGTTGGTGGCCGGCAATGGGGATGGGAAGGCGGCGGATGAGCTGCACTTGATGGTCGCGCAGGAGGCGCTCGATCTGGTACCGACTGGCTTCGTCGACGACGTAGAAATGACCATTCGGTGCTAAATCGGGGGCGGCAAGGGTCTTTTCGCCCAAAAACGAATTGGTCATCAGGGCCGCCCGAACGCCGTAGTGGGTGCGTAGACTGTTGATGATGTTGTAGTCGACGGTGGCGTTGGGGAGGTTGCCGGGTGCGTTGGCCGAGGGCCAGTCGAGGAGGTAGCGGGCGGGGGCCAAGCGGTAATGCCAGATGGGTAAAAAATAATCGGCCGACTCGAAAAATACTGGGTAACGGGGATCAAGCTGCGCCAGGTAGGGTACAATGGTGCTGGGAAAGAGCTTCACTTTGCGG # Questionable array : NO Score: 8.73 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGTACCTGAGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 72920-66457 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMYU010000016.1 Fibrella sp. HMF5036 16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 72919 29 100.0 37 ............................. CAGCAGGTGACTCACGATGTCAATGCCCATCAGCGTC 72853 29 100.0 35 ............................. TGACCACCCCCGACCCGCCTGCCCCCCCGGCGGGA 72789 29 100.0 37 ............................. GCCTTATATTTCATTTTACCCCCCTGATTCTGGTGAC 72723 29 100.0 37 ............................. GTGGCGAGGTAGGTACGGAAGCTGGCCTGCCCGTACT 72657 29 100.0 38 ............................. GGCCACCTGCGTTAGGGTCAGATTATTGGCCGTGGTGG 72590 29 100.0 38 ............................. CATTTCCTTGAGCTTTTTCCAGACGGTATTGCCGGCCA 72523 29 100.0 37 ............................. ATTTGGTCGAGGTAATCGGTTAGGTCGGCGGCGCGGA 72457 29 100.0 37 ............................. ATTTGGTCGAGGTAATCGGTTAGGTCGGCGGCGCGGA 72391 29 100.0 38 ............................. GTGTAGCCCCCCGCCCCGTCGGAAACGGGCTGGGCCAC 72324 29 100.0 37 ............................. TAGCCTTGCTACCCGTTCCATCTCCATTTCCATGTCC 72258 29 100.0 36 ............................. AGTAGTCCCACCCCACGCTGTCACCGTACCCCATGA 72193 29 100.0 38 ............................. TGGGCAGTTTGTTGAGCGTGTAGGTAGCCCCGAACTGC 72126 29 100.0 36 ............................. TATTACTTGTCAGCATCATCACTGCCAACCAATACC 72061 29 100.0 37 ............................. GCGAATCCCCCGCCACCATGCCCGGCAAGTGGCGCTC 71995 29 100.0 38 ............................. TGATGCGCACCCGGTAGGGGTCGGCGGGGGTACCCGTG 71928 29 100.0 36 ............................. TTGATTTCAACGTCCTGACCAATGTAGCGGTACAGT 71863 29 100.0 35 ............................. TTGTTTGAGGCTGTCGGGTAGCCAGATCGTGTGCA 71799 29 100.0 37 ............................. TCAGGCGGGTGCGATGGGCGTACTCATTGTAGATAGG 71733 29 100.0 37 ............................. TCGCATTACGGACCTACAGACCGAAATCCGTCAGGCG 71667 29 100.0 37 ............................. ACAAACTACTCGACCAGCTCACCACCAAATTTCCAAC 71601 29 100.0 38 ............................. GATGTGAGTTGAGCCATGTAGGCCTGTTCGATGACGTA 71534 29 100.0 37 ............................. TAGGTACGCTGCTCGCCATAGTCGCTGATGTAGCGGA 71468 29 100.0 37 ............................. ATTGTCTGGCTCATGCAGGAGCAAAATGGGCGGCGGC 71402 29 100.0 37 ............................. GGCGGCTCATTGTGGGCACAACCAGCACGGGCGTTAA 71336 29 100.0 38 ............................. GGCATTACGGGGCCAGTGGTGGACTTTGCCCGCTACCT 71269 29 100.0 38 ............................. TTCGGTGGGGTGTAATGTGTCAATCATCTAAGGGGCTG 71202 29 100.0 36 ............................. GCGTTGCAACGCTGGTTTTCGACACCCGGCAACTGG 71137 29 100.0 35 ............................. ATCATTGGTTACTACACCAACAAGGGCGCAAAAGA 71073 29 100.0 36 ............................. AAACCGGGCAGCGACCGCGCGAACCACCACCCTATA 71008 29 100.0 37 ............................. GACGGTTGAGTTAGAGGGCAACGAAGGGGTGATCAAC 70942 29 100.0 37 ............................. GCAAGCTCCGGCAAGCTGTTCCCGTGCGTGGGGTGCA 70876 29 100.0 37 ............................. TTCGCTTTAATACAGAACGGTATGCCTTTTCCTGCTT 70810 29 100.0 38 ............................. ACGGGCAGTTCGACGGGGGTAAGATCAAGCCCCTCTCC 70743 29 100.0 36 ............................. GAAAACGAAAGGGCAACAAGGATGACCGTGCGCTCT 70678 29 100.0 38 ............................. TTCGGTGGTGGTGTCGACTACCTGTTGGGCCACAAACT 70611 29 100.0 36 ............................. GGCCTGGCCGTACTGGAACATTTGTTCGACCGTGAG 70546 29 100.0 37 ............................. CCAGGGCGCGGGCGGCAGCAGCCAGGGCGGCTAAAGT 70480 29 100.0 36 ............................. TTTCGACGGCGCAGGCGACGGCCATTAACGGGGCAA 70415 29 100.0 36 ............................. ATGAGGCGGTAGAGGTGCATTAAGGCAGAGTGGTCG 70350 29 100.0 36 ............................. GTCTTCAGGAGCTACAAACCAAGTGCGCCCAGGCCG 70285 29 100.0 39 ............................. GTTTCTGCGTCGTCATGGGTGCCAGCAGCCGCAGGATCG 70217 29 100.0 35 ............................. GCGTTTTGGATAGGTTGCCCCGGCTCACGTTCATA 70153 29 100.0 36 ............................. TCGTAATAGGTAAGAATGATTGCTCCATTTGGCCCG 70088 29 100.0 36 ............................. TGCCGCAGTCGGCAGTGGCGGCGGGTGGGCTGACGC 70023 29 100.0 37 ............................. AAGGTTGTTTAGGCCCAGGCGAGAGCAAGACAAAAGA 69957 29 100.0 36 ............................. TCGGCGTTCTCTTTGTGGAAGACATCGGCCTGCACG 69892 29 100.0 36 ............................. TGTAATTCCTATGTCGGACCGTCTGTATTCTGCGTT 69827 29 100.0 37 ............................. AAGGATAATATCCTTCGGCTCTTTGCATTACCAGAAA 69761 29 100.0 35 ............................. CCAACATATGTTCGTATTGACCCATCGCTAAGGGG 69697 29 100.0 36 ............................. CGAAGCTGGTACAATCTGGCCAAATCGTGTTCAGTG 69632 29 100.0 38 ............................. TGATTCAGGCCCAGCCGGGGCAGGCGGGCACACTCTGG 69565 29 100.0 37 ............................. AAGTACGAAGGTCAGGTGCTGAGTCGCCGCGATGGAC 69499 29 100.0 37 ............................. GGTGTCATCGTCACCGACGTGGCGATCAAAGGGCTGA 69433 29 100.0 37 ............................. CGAGGCCGGCAACCTGCTGCGGCTTGACGACTTTGAG 69367 29 100.0 35 ............................. ATGACGTGCTGGGCTGCATTGGGACGGGTGAGAGC 69303 29 100.0 38 ............................. TTGCAGGCGATCTACCTTGGCCGCGTTGGCTACCGGCG 69236 29 100.0 38 ............................. GGGGCCAAGGTGGGGGATATAGTACTTCCAACCTTCGA 69169 29 100.0 36 ............................. TGAGCGTGCCGGTCAACGTACCCAACATCGCCGCCA 69104 29 100.0 36 ............................. CCGAGGCGACGTCGGTGTTGGCGACGGGTATGCCCT 69039 29 100.0 35 ............................. AGGGGGTACAGTACCAGTACCTCGAAGAAGACGGC 68975 29 100.0 39 ............................. ACGCTGCTGCCGCCGCAGGTTGTCAGCCTCGGCGTTCTG 68907 29 100.0 39 ............................. GCAGGCCATCCGGCTCGGTTCGATGGTCGACCTCACCAA 68839 29 100.0 37 ............................. GAGTGGTCGTCGTTACACTCGCCACGCCACCGGCCGT 68773 29 100.0 37 ............................. AGGGTCTGGTCCACGGCATTGGCGTCTCGATCACCAG 68707 29 100.0 35 ............................. CTGGCGATGGGGCAGTACGAGGCAATGGTGGCGGG 68643 29 100.0 35 ............................. GAGGCTACCCGTGATGGTGCGCATATCAAAGAGGA 68579 29 100.0 38 ............................. TAAGCGCGGCGGGGGGCGACCAGTCGGTGCTCAATGGC 68512 29 100.0 37 ............................. GATGGTCTCGGCCCGCAGCAACCCGCACGTATCGAGC 68446 29 100.0 36 ............................. GCGAGGTGTACTGGACTTTCGACAGGCGCACCAACC 68381 29 100.0 36 ............................. CTTGCTGAGGTAGATCGCCCCCAGAACGGCGATCAC 68316 29 100.0 36 ............................. ACGTAACCGTGTCTGCCTCCCTTGTGGCAACCAATG 68251 29 100.0 37 ............................. AAAGCGCAGCCAAGAGCGTACCGACGGGATTCGGTGG 68185 29 100.0 36 ............................. ACCAGGTCACGGCCTACAACCAGCTCGAAGCCTGGC 68120 29 100.0 36 ............................. CGCCCTGGTTGCGTTTGGAAAGGATCTGGGCTTTCC 68055 29 100.0 36 ............................. TCAGGATTCTTGAGGTAGAAGGAATGCTGATCGTCG 67990 29 100.0 36 ............................. GAAGGTCTTCTACGACAAGCACGGCTATTTCCCTCA 67925 29 100.0 37 ............................. GCTCATCAACCCCCAGAACCTGACGGCGGTGGTAGGC 67859 29 100.0 36 ............................. CTCGCGAAGTGGGTTGGCCACCAGGGCCACCTGGGA 67794 29 100.0 37 ............................. GGTCTGGTTTGAATCTGCAATATCATTGCCATACGGC 67728 29 100.0 37 ............................. GGCTTAATCGTAATTCCGATTGGCGCTGTTGGCGTGT 67662 29 100.0 35 ............................. CTGAATTATATTTCGCGTAAAATGACAGATGAGAA 67598 29 100.0 36 ............................. ATTGGCAGTCGACGCCCGCCCGCGTGAACAACCCCG 67533 29 100.0 37 ............................. TAGCAATGCGGAGGGGTACGCGGTCGTTCGTAGTGGT 67467 29 96.6 37 ............................T TGGGACGACACCAGTTCGAGGGCATCTTCGGGCGCGA 67401 29 96.6 34 ............................T AGCGAGTAGCCCACCACGAAGAGGAAACCGCCTC 67338 29 96.6 37 ............................T GCAGATTGCACCCTGTACTGTAACAACATAGCAACAG 67272 29 96.6 36 ............................T CAGGGAGCCTGTTCGACGTGACGCAGTTTACCATCC 67207 29 96.6 36 ............................T TAGAGTGGCAGATACATCCCCAGATCCCCTTCCATG 67142 29 96.6 36 ............................T TGAATGAACGCAGCCAGCAGGCAAAACGTAGCATAC 67077 29 96.6 38 ............................T TGGATGCCACCATCAAAGGGGCCAACTACGGCAGCATC 67010 29 96.6 36 ............................T GATGCTCTCGGGCCTGGGCGAGGTGACTGATCCCGA 66945 29 96.6 36 ............................T TAAACTGTGTCTGCTGGGGGCTACGGATGCCGAACT 66880 29 93.1 36 ..T.........................T TCAATGATGTGTTCAGCCCGAACGCGCTGGATGTCG 66815 29 89.7 34 ..T.........A...............T CTGGGGCAAGAATGAAGTGGGGTTTTCGGCCCTG 66752 29 93.1 37 ..T.........................T TAGCGGGCCACGTTGGCGTCGATACCCCCCTGGGCCA 66686 29 100.0 41 ............................. GAAGATCAACCGGGAAATTGCCAAGCTGAAACAAACGCCTG 66616 29 96.6 36 ..T.......................... GCGAACGGACAACCCAACGGAAGCAACGCCAACACA 66551 29 93.1 37 ..T.........................T TGGGAAGACACCTCTGTCTTTGGCCACGACCCCTCGG 66485 29 96.6 0 ..T.......................... | ========== ====== ====== ====== ============================= ========================================= ================== 99 29 99.3 37 GCCTCAATCGGACCTGCGGGTATTGAAAG # Left flank : AACCCGTTCTTTGACATCATGCCATACATTATTGCGGTCTACGACGTGGGGCAAAAGCGCGTAGGCAAGATGCTGAAACTGTTCAGGCGGTACCTGACGTGGGTGCAGAATTCGGTATTCGAGGGAGATCTGACGGGGGCACAACTCCGGCAATTGCAGCAGGAGGCGGAGGCCATCATGGCCGAGGCCGATGGGGTTATTTTCTACCAGCTTCGCGACGAGCGTTACTCGGAACGAACGGCCCTGGGGGTTGATAAAGCCGAGCGAAGCCGGTTTCTGTAAGTCGTCGGCCGGTGGGGTTGGCGGGGCCGGTGGTGGGGTTTTGGCGGGGTTGGCCCGTGGCATTGGCTGATTGCAGCGAATGAGGGGCTTTTTTACGAGTCGTCGGCCTACGGGGGTTTTAGCACCACCGCAAGCCGACGACTTTTTTTGCGTATTCTTGTGCTAACAAACTGGCTCTACGACTCAAAAACAGCATTTCTCCGCCTGTTTTCGGCGGG # Right flank : TGATTTGATATTTTGTTGATAAACAGATAGGGCTGGTGCTGATGATTGGGCTGAGCCTGTTCTGGCACCGTTTCTGACCACGCCCCCCTTACATCCTGCCATAAAGACCCCCTCAGGCTTTGCGGCGACGGCATACTTAACAATCTGCTAACACTATATGGCTAATAGATACTGTAGCTTTGTGGTTGAAAAACTTATACCATCTTTTCATGACTTCATCTCTACAGCGAGCTTTCTATGCTTGGCTTGGGCTATTCATGCTCTGCATGATGCCAACACGGGTACGGGCACAAGCACCGACCGATCTGTTCTTCTCGGAATACATTGAGGGCAGCAGCAACAACAAAGCCCTCGAGCTTTACAACGGCACCGGTTCGGCCATCAATCTGGCTACCGGGCAGTACATTATCCAGATGTACTTCAACGGCGGTATTACGGCCAGCACTACTATTAATCTTACCGGCACCATTGCTCCAGGAGGCACCTACGTAGTAGCTCCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATCGGACCTGCGGGTATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : NA //