Array 1 14104-15025 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFAT010000004.1 Halomonas sp. KRD171 Scaffold_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 14104 36 100.0 33 .................................... ATCCCCAGTCCTGCTGAGAAAACCCTTCAGTAC 14173 36 100.0 31 .................................... GATTTATGAGCCTCACTCTTATTCATATAAT 14240 36 100.0 32 .................................... GAGATGCTTGTGTGGCGCTCTCGCCATTAGCA 14308 36 100.0 32 .................................... GTGTAGTGTGAATAAACACGACGCAGTTTTTC 14376 36 100.0 31 .................................... CCAAAACGCCGCCTTGGTGGCGGCGTTTTTT 14443 36 100.0 32 .................................... GACGTGCGTTACCTGAGAAATGAGCATGTGCT 14511 36 100.0 32 .................................... GGGGTACCACGTGGTCTGAGTGAGCGGGATGA 14579 36 100.0 32 .................................... TTTGAATGCCGTTCACATCCCCTTCATTACCC 14647 36 100.0 32 .................................... CGTACGAAATTCCGCACGATACGATGTTATTG 14715 36 100.0 33 .................................... ATTGGTTGGCGCGCCATAGATAAACGGTTGTTT 14784 36 100.0 32 .................................... CCCCCACCTACTTTGGTAAGGAGCCCATGATC 14852 36 100.0 33 .................................... AATACACCGCACTTGTGGTGGGAGACCCTCATC 14921 36 100.0 33 .................................... TTGGTACTACCATCACTTATAGCACCAAACTGT 14990 36 94.4 0 ..................................GA | ========== ====== ====== ====== ==================================== ================================= ================== 14 36 99.6 32 GTCCAGAGCCTTCCCTGACTTCGAAGGGATTAAGAC # Left flank : TCCTGTGTAGGGAAACAGAAATCTGAAGAGGTAGTGATCAAAACCGCGACAAACATCTGGTCAGCGAACCGCGAAGGCCTATGGCGCAACGGCCTCTTGATTAGTTCGCATCCACGAGGCTGGGAGCGAGCCATGTGCAGCCAACTGGATACATTTGCTCATAATATCCGTCATGGCACCTGGGATAGCGACATGATTTGGGATCAGATTCCCGCTATGCGTTTAATTGACAGCGCTTACCGGCTGGCCTCGCGTTACTGAAAAGAACTTCCGTCGACCGCTCTCACTTGCTCACTTTACACCAGACACTGTTCATCTTGTTCTGCGACAAAGCTGAGTTTTGTCTGTTAGAAGATTGCATCGGTTCCTGTTAGTAGGCATTATTAGGAGTGAGCCTAAGGATCATATACATCATCCAATAGCAAACTTTTTATGCCAAAAACGGTCGTAAAAAATTGTCCTCAACCAACTGATATAAAAAGATTATTTTTGAGCCTGCA # Right flank : AGGCTCTGAAAAAGTCTCTGCCTTCAGCGATAATACGAACATCGTCAACTGCATAGGGTTCAGTGCTGCCATGGATCAGATCACCTTCTCCGAAGCCGAGTACCAGAACAAAAAGCGAAAGACTCGCCGCGAACTCTTTCTGGAGCGGATGGACAAGCTGATCCCCTGGACTCAGCTGGAGAAGAAGGTAGCCCGTTATTACCCCAAGGGCGAGAGCGGGCGGCCTCCGTATCCATTGTCTGCCATGCTTCGAGTTCACTGTATGCAGTTGTTCTACAACTTGAGCGATCCGTCAATGGAAGATGCTCTCTACGAGATCGAGTCCATGAGGCATTTCGCCGGTTTGAAGCTAGACCGATTGCCGGACGAAACGACGATTCTCAAGTTTCGTCATTTTCTAGAACGACACAGCCTTGGCAAGGTGCTGTTCCAGGAAGTGAACAAACACCTGGCGAAAAACGGCCTAATGTTGCGCGAAGGCAGCATTGTTGATGCCACTA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAGAGCCTTCCCTGACTTCGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 16220-16391 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFAT010000004.1 Halomonas sp. KRD171 Scaffold_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 16220 36 100.0 33 .................................... TGCCGCACCGTAAGCATCAAAACCTGACATAAA 16289 36 100.0 31 .................................... AAACCCTACAGTGGTGTAGCTTACGTACGTC 16356 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================= ================== 3 36 100.0 32 GTCCAGAGCCTTCCCTGACTTCGAAGGGATTAAGAC # Left flank : ACGGTGAAGAGCAGCGCGTCTTCGGTGATGCCGGTTACCTGGGCATTCAAAAGCGAGACGAGCACCATCACCGCTGCGACGTCTCTTGGTATATTGCCAGACGGCCTGGCACGCGAAAGAAGTTGGATGCCAAGCAACAGAAAGTCGAAAAGATCAAAGCCAGCATCCGAGCCAAGGTGGAGCACCCTTTTCGGTACATCAAGCAAGTCTTTGGTTATGGCAAGGTTCGCTATCGTGGTCTTGCTAAAAACACCCAGCGCCTGCACCTGCTGGCGGCGTTCAGCAACCTGCTGATCAGTGAAAAATACCTGTGGGAATAGGGCTATTGCGCCCGTTTTCCGCTTAATGAGCGGTTAACGGGCAAAAAATGCACAAAGAACGGGAAAATAGTGCCTAAATTTGCAATTTTTTATCAGCTCAAGTGAGCGTTGACGAATATCGGTAATTATTCAGACCTTCCTTAAGACTTTGCTGCATAGAGGATTTTATCCCCTACTTTA # Right flank : CTGCCTACGCTTCCAGCACGCCATATGGGCGCCTTTAATATAAGGAGTGTTCTGCGTAGATATGGCCAAGCTGCTCACTAAGCGCCTGTATACCGTCCAAATACAGTAAGTCGTTGAAGTCCGTTGGATTAGCACCTAACGCATCACTTGAAAAAATCGGCCCGTAAAGAGTATCACCAGGCTGCATCGCATCATTGGCTGCACTGTAACCGACATTGCCCACCTGGGGTTTCCATTGGTCATCATCATGGAAGAAGATGGCCGCCCCCTGAACGCCTTTACGCACAGCCGCTAGGTTATGTGCATTCAATGCAACACGGATTTCACCAGGCCACACCAGTGCCAATGAAAGCCCGGTTGCCAACCCTTCGCACAGAGCCACCGGCAACGTGCAGCCTTCCGTTTTTTCACGCACGCGAATAAAAGCACCGCGGCTGGCTCCTTCCTCATGAATCACCATGCGCTTTTGTTCTTGTGGGCGCTCATTGCCTGCACAGAGA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAGAGCCTTCCCTGACTTCGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 3 24222-27343 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFAT010000004.1 Halomonas sp. KRD171 Scaffold_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 24222 36 100.0 34 .................................... ATAAGCAATGCGCGGGCGCGGGCTTCGTCTTGGT 24292 36 100.0 32 .................................... AGAAGACCATGTTGGTCATCTCTTCGTTGACT 24360 36 100.0 33 .................................... AACTCTTTGTTGCTTGCGTCCTTTGGAGACACA 24429 36 100.0 33 .................................... GGTGATTCCCAAAACATCAGCACCGTTTATTGG 24498 36 100.0 32 .................................... TCAGAAGAAAGCTTTCCTCCAACCACCAATAG 24566 36 100.0 32 .................................... GAAGTGGGGGGTGTGACGATCACCAAGGCAAC 24634 36 100.0 32 .................................... GTTCTTCCTCGGTTTCTACCGCGTCATTAAGT 24702 36 100.0 33 .................................... CTCTTAGATGTTACTCTCTTAAGAGGGGATGCT 24771 36 100.0 33 .................................... ACTGTTAAGTTAATGGAGAAGACAATGCTGTCA 24840 36 100.0 32 .................................... GCTTCTACGGACGTAACCTCCTCTGTTTCAGG 24908 36 100.0 33 .................................... GCTGCAAGCTTGGCCAATAGGGCAAAGTTGAGT 24977 36 100.0 33 .................................... TGATCATGTAGATCATTACGTGCTGTTTGCATA 25046 36 100.0 32 .................................... CCATGACATTCATGGTCTGGTCGTCAGTTAGT 25114 36 100.0 31 .................................... CCACTCAGTGGGTTTGAGGTCGTGATTTGCT 25181 36 100.0 32 .................................... AATTACTTTATTACCAGCAGCAGCTTGATTAC 25249 36 100.0 34 .................................... ATCTAATACCCTGTCGGCATCGTGTCCTGTTACC 25319 36 100.0 31 .................................... TTAACAGATGCAAGAATAGCGCATACTTGAA 25386 36 100.0 33 .................................... GAAACACTTTGGTGAAGTCGAAAACAACAGGGG 25455 36 100.0 32 .................................... ATCAGGCTATTAACGTGGTCGCGGCGTTCATT 25523 36 100.0 33 .................................... GAAGATGCCCTTGCGTACCTAACCGCGGTGTAC 25592 36 100.0 33 .................................... GTAATAATGGCGTAAGGGATCACCTGGGGAAGA 25661 36 100.0 32 .................................... TTGGCTCATGCTTCATCATCCTCTTCACTTGT 25729 36 100.0 33 .................................... AATCATGGAATAACATCGATGTTACCATTGGGA 25798 36 100.0 33 .................................... TGGAGCAAAACCCGGCAGCAGAACACATACTGA 25867 36 100.0 33 .................................... GTATCTTCCGCATACGGAAGGTAATCGGTTAAT 25936 36 100.0 32 .................................... CTTCTACCTCATCCATCTCTAATCCCTGTTGC 26004 36 100.0 33 .................................... GGATCGTTCTGTTCGACCAAGTGAGCGGTTTCT 26073 36 100.0 33 .................................... GTCAATCTGGAAACCGCCATGGCACCGTTTGCC 26142 36 100.0 32 .................................... CGACTGTGTTCACCGGACAAGCCACTGTCTGG 26210 36 100.0 33 .................................... TCAGGGGTGTTACGTGAGCCTACGCCTGTATAT 26279 36 100.0 32 .................................... CGCCCACTCAGGGCTAACGGCCAACCAACCTC 26347 36 100.0 31 .................................... GACGGCAGTAATCCAATAATGCCGTTTTGAT 26414 36 100.0 33 .................................... CCAGGGATACAGATCCCATAGTGACCGCCTTGC 26483 36 100.0 33 .................................... TCTAAATTCCTACTGTATTAATCCACTCTTCTT 26552 36 100.0 33 .................................... AACTCCCACCAGAAGCCGTCATTCCCGTACACC 26621 36 100.0 32 .................................... GAACGAATCGCCCGTGCCACACTCAGGTCGTC 26689 36 100.0 35 .................................... GATAGCCCGCGGGTAGAACACGCCCATTTCGCTTT 26760 36 100.0 32 .................................... TATTATCGACAGAGTACCGTTCAACGGTTTGT 26828 36 100.0 32 .................................... AAAGCTCTAGCACTTGCAGCAATCCCAGCTAG 26896 36 100.0 32 .................................... AAAGCTCTAGCACTTGCAGCAATCCCAGCTAG 26964 36 100.0 32 .................................... GTCGATACCCCCAGGACGAGAACACCATTTTT 27032 36 100.0 34 .................................... ACTTACTGAGTTCAGGACTTACTTCATTTAAGAC 27102 36 100.0 32 .................................... GGAAGCCAAGCGCATATCAGAAGAGATGATGG 27170 36 100.0 33 .................................... AATGAACGTGCTGTAGGTTTTGCCTTGGTGGCT 27239 36 97.2 33 ......G............................. CACAATGAAATGGTGGAAGTATTGAACAGCAAT 27308 36 83.3 0 ..................T..T..T..C..A...C. | ========== ====== ====== ====== ==================================== =================================== ================== 46 36 99.6 33 GTCCGGACACTTCCCTGACTTCGAAGGGATTAAGAC # Left flank : CTGGCTGTTAGCGCGACAGCCCAACCCTGATCCAGCACGTGCTGAACGGCATTTCCAGGCAGCGTTGGCGTTATGCTTCGAGCCGACCAATGGCATTACCCTGCACTGGATGGGTGCTGTACTACACAACTTGGCGGTATCGCTGCTGCCCAGCTTCAAGGCAACACGCCCAGCCTTTTCACAACCGGAAGTCTTACAAAAGACGTTACCTAGCGCACCACATGATGCTCTGGCAAAGCTTGCAATACTACCTATAAGAGCCTCGCATGATATACGCCGTGCCTTGATAGCCGAGTGCCTGCCCTTCAATTTTCATTAAGTAAAAGCGCCTGATGCCTGCTCATTGCATCCCGATCAATGAGCAGGCATGATAGAAAAAGAGTACGAAACTTGGCTGATAAATCATAAAGACCAAAAAATAGCAAACTTTTTATGCCCAAAACAGTCATAAATTTTCGCTCGCAACTGGTTGATATGAAAAAGACATTTTTCATGCTCGA # Right flank : CCAATAGCCGTGGGCTGATGGGCTTTTTTAGAAAAAAGCGGCTTGCGTTTTACAGCTCGCGTTTAAGTACCTCACGGATAATACGCTTGGCTTCCTTTTCCTTATTTTTTAGCTTGTATTTCTTCATAAAATCACGCACAGCGTCCACCAGCGCATCCTGTTCCAGCTGAGGCCAGTCGACAGAACCCTCCAGCGTAGACAACACCTCTCTATGAAACTCCGCACCGCTACCGGCATTCTGGTTGGCGAGTTGCTGCATACCTTCCAGAAGCACTGCCAGTTGACGCTGCTCAGGTGACATGCCTGCCAGGGCCGCTTCTTCTTCACGCGCCTGCAGATTCTCTTCATATTCCTTGCGGCGCTGGACGGCTTTGCGTTCATTCGTTTCATCCAAGGCCACAAAAGTGCCGTAACCCGCTGCCGTTTTGGCTCCTGCGCCCTGATGCTCCAGCGCGTCACTCAAAGCCTGACTGGCCAGCTGCGCTAGTGCCAACGACTCT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGGACACTTCCCTGACTTCGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //