Array 1 38627-37161 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATKE01000047.1 Fusobacterium hwasookii ChDC F145 Contig047, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 38626 36 100.0 43 .................................... CTCTATTATTGCAAACTTGCTTTCTATTTTCATAATATACCTC 38547 36 100.0 40 .................................... TTATTTGGTTATGAAAAAGGTTCTTTTGAAGGAGCAGCAT 38471 36 100.0 41 .................................... TCTAATTGTAGTTATAGCTATTCTTACAAATCTATCAGTAT 38394 36 100.0 38 .................................... ATGTTTCTTTTTGTTTATTTTCATCTACTCTTTTGATA 38320 36 100.0 39 .................................... TATAATGACAATAAATGTTATTACATTTTTCTAATTTAT 38245 36 100.0 40 .................................... ATACTTACAAGCCATCTTGTATTAAATGTATTTTAGAAGT 38169 36 100.0 41 .................................... AAGAAAACTAGGGAAGTTGAAGTAGAAATAAAAAGTAACTA 38092 36 100.0 35 .................................... TGTATCTAGGTTGTCATCTGTAATTGTATTATTTA 38021 36 100.0 41 .................................... TCTTCATCACCGTTCAATCTATACTCATCTCTATTACTATC 37944 36 100.0 37 .................................... TATAAAGTTTTTCTAAATTTGCTAAAGCTATTTCTAA 37871 36 100.0 34 .................................... TTAGTATTTTTTACACCTCTTGAATTTAAAGTTG 37801 36 100.0 43 .................................... TCACAAACTTGTGTACTAACCATTGTACGATTATCACCATATA 37722 36 100.0 40 .................................... CAACTGAAGAATAAGATTCTAACATTATATCTTCTAGTGA 37646 36 100.0 42 .................................... CCAATATTTCTAATTTTTTGTCTTTCATTACGTGAGTGTAAA 37568 36 100.0 39 .................................... TATCTAAAGAAAATTCTCTCATTAGAGGCTGTTCTTCCT 37493 36 100.0 40 .................................... CAGTACCACACGGCTTTTAAAAACCATTTAACTTTAAATT 37417 36 100.0 40 .................................... CTTTACCTACTCCGTTGATAGTATCATTTTTATTTAATAC 37341 36 97.2 40 .....A.............................. GGTAATTTAGAAACAAATTCTTGAACTGCTTTCTTTTTGA 37265 36 97.2 33 .....A.............................. AATTTTATTTTAGATATCTTAAACTATACATTA 37196 36 72.2 0 .....AA.....................TTCCTTTT | ========== ====== ====== ====== ==================================== =========================================== ================== 20 36 98.3 39 ATAAGTGAGAATATAACTCCGATAGGAGACGGAAAC # Left flank : GCCAATATATACAAATCAGTTTTAATCAGGTGATATTTATGGATAATTGGGATTTTTTAGATGAAGATTTTGAAAAGGAAGTTTTTGAAGATAACTTTACGGTTATCATAATTTATGATATTATATCCAACAAGAGAAGAACACAATTATCTAAACTTTTGAGTGCATTTGGATTTAGAATTCAAAAATCTGCATTTGAATGTCTTTTAACAAGAGAAAAATATAAATTACTCATTGAAAAGATTGATAGATATGCAAAGCCAGAAGATTTAATAAGAATCTATAGATTAAATCAAAATGTAGTAACTCAAATTTATGGAGAAAAATTAGAAATTGAAAATGAGATGTACTACTTTTTCTAATGAAAAGTAGACGATATGATAAAAATGGGAAGTTCAATATGATTTTTGATAAAACAAAATATAAATTTTTAAAATTTAAAAAGTCACACGATAATAGTTTTATAAACTATTGCAAACAAAAGTTTTTTTGAGTATAGG # Right flank : ATTGACAAAAAATCAATATATTTTTATAATATTAGTATAAGAAAATAAAAAGATAGAAAAGTCTAAAAACACTACCATGTTATAATATTTAATCAAGAATTTCTCACAATTGAAATTTTTATAGAAAGAAATAAAAACTATTTAAGGAGGAATTTTATGAAAAAATTATTATTTTTAACATTATTTGTAGGAATTTGTATAACTGGAGTAGCAAGTACAAAAGAAAAAAATCCAATTCTTATGAAACAAGTATTTAAAAAGGAAGAATTAATAACATTAGACAAAGAAAATGTAGCAGGGGGAAAAGGAACTTTAAAGGGAAAATTTGCTTTTACTAGAGATATGGCTACTGAAGATGAAGCCATAAAAGAAATAGGTTGGATGACATTAAACAAAGGAGAATCTGTTGGAGTACACCCTCATAAGAATAATGAAGACACTTACATTATTATTTCTGGAGAAGGAATATTTACAGATGGTTCTGGAAAAGAAACAGTAGT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGTGAGAATATAACTCCGATAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 95394-92956 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATKE01000141.1 Fusobacterium hwasookii ChDC F145 Contig141, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 95393 30 100.0 37 .............................. GCTTTTGTATATTCTAAAATTATTTCTTCAGTTGGAA 95326 30 100.0 37 .............................. CTGTCTATGTTTAATATGCAAATATCGCCAATTTTAT 95259 30 100.0 37 .............................. ATTTTTCTTATTTCTAGCATCATGTCCTCCTGTTTTC 95192 30 100.0 38 .............................. GGGTTTTCTTCTTTTTCCTGAAAGTTTTGAAACAGTTC 95124 30 100.0 38 .............................. GTGGTATTTAATAAATATTAAAAATATAGATAAAAAAG 95056 30 100.0 35 .............................. CAACTAAAAAATTACTAACTCTAACAGTTTCTTCT 94991 30 100.0 36 .............................. GTGCCTTTCATTCCAGGGGTTAAAGGTTAAAATAAT 94925 30 100.0 36 .............................. TGTTCTAAAACTTTATCTATAGCTTTTTCAAAATTA 94859 30 100.0 36 .............................. ATACAAATTGATATTCAAAGTAGATTTTTATTAAAC 94793 30 100.0 35 .............................. AGAATTTCTATAATATTTATATTGTTACAATTACA 94728 30 100.0 38 .............................. AGAGTTATAGCAAGGACTATTTCTAATAATGTAATTCA 94660 30 100.0 36 .............................. AGATGAAGAAAGAAATATTAGCGAACAAGGAGTACA 94594 30 100.0 36 .............................. TTAGCAAGTTTTAAATGTATTTCTTTTCTTTTCTTC 94528 30 100.0 36 .............................. GCTACCATAAAAGCAATGTCTTTATCTCTACATCTC 94462 30 100.0 38 .............................. ATAGTATTTGATGGTGCAGTAGGAAGCGGACAGTTAGA 94394 30 100.0 38 .............................. ACACCAGGAAACAAAATATAGAAACCATATCTTTTTGT 94326 30 100.0 37 .............................. GGTTGACTTGTGTATAATTCCAATATTATTCCGTTTT 94259 30 100.0 36 .............................. AATAAATCTAAAACATTCCAATTTTCTTTGCTTGAA 94193 30 100.0 36 .............................. TGTCTAGGTGGAAGATTTAAAATAAGAACTTCATCT 94127 30 100.0 35 .............................. TTATTAGATGTAAATTTACAAGATACAACACAAAA 94062 30 100.0 38 .............................. ATTTTTCTGAAAATGGATGATACTTAATTTTATTTCTA 93994 30 100.0 37 .............................. TCAAATTTAATTGTTAGATTTGGTGGTGGAGTTTCAA 93927 30 100.0 37 .............................. ATCTCCTAACAGGTCTAATCTGTAATCTCTAGCATAT 93860 30 100.0 37 .............................. AGTCTATATTTAAAAGATGGAAATAATTTATTATTGG 93793 30 100.0 35 .............................. TTGTCAACTATTGCTTTTACAGCTGTAGTCAATAA 93728 30 100.0 37 .............................. AATGAAACTCTATATTTTAGTGCTTCTTATAGAAATA 93661 30 100.0 36 .............................. ATTACTTGGATTATAGCTGGAGTTGCTTTAGTTATT 93595 30 100.0 39 .............................. CACAAATCTATAAACTTCTAATTTCTCTGAGTTCTGTAT 93526 30 100.0 36 .............................. TAAAATCAAATTTTAATTATATAATTTCTCTCTTTT 93460 30 100.0 39 .............................. ATTACATCAGTTTCTTTTAATTTGCTAACATCTAAGAAA 93391 30 100.0 38 .............................. AATAATTTTACAGTGTATTTTGAAGGTAGAAGGATAAG 93323 30 100.0 37 .............................. ATTCTGCTCTTCTGCTGTTCTAACTCCCGCAGTTATC 93256 30 100.0 39 .............................. AACATAGCAACAGCTGCATCATCATTAATCAATGATTCA 93187 30 100.0 37 .............................. TTATTTAAACTTGCAAAAAGTTCAACCATTCGTATTT 93120 30 100.0 39 .............................. TAGTGACAGAAATAACTTGACCTGATAGCTGTAGATTTC 93051 30 100.0 36 .............................. TTAGATTTAAGAATAGAGAGTGACCAGGATTTACAA 92985 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ======================================= ================== 37 30 99.9 37 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : AATCTTTTCAAATGTGGTGGTGATAAAATGTATGTAGTTGCAGTGTATGATATTTCATTAGATGAAAAAGGTAGTCGAAATTGGAGAAAAATTTTTGGAATTTGTAAAAGATATCTTCACCATATTCAAAACTCTGTCTTTGAAGGAGAATTATCAGAAGTTGATATTCAAAGATTAAAATATGAAGTTTCAAAATATATTAGAGATGATTTAGATTCTTTTATAATTTTTAAATCAAGAAATGAAAGATGGATGGAAAAAGAAATGCTAGGTTTACAAGAAGATAAAACTGATAATTTCTTATAAATTTTATTGTCTACCTCTGATAATGTAAAATTAGTGGAAGAATGACAAAAGTTATAAAATCGTTTATTTATAAATAAATTTAAGAAAACAAAAAATTTTAAAGAATCAAAGTTTTTTATTTTTTACTAAAAAAACTTACATTGACAAAAAGATATTAAAAAAGTATTATGTAGGAGTAGCTTTTTTAGCTATCT # Right flank : TAAATCAGTTTTTATAGTGTTAAGTGTAGCTTAATAAAGTAAATTAAAAATTAAATATAGATAAAGTAATAAAGAAAATAAAAAAACGAATTTAAACTAAAACATTAATATAATGAACATAAAATTTTAAGATGGTGAAAGAAAAAAATTAAATGTAAAATTAATAAATTTTTAGCAAAAATTAGGTAAATTTCTCAATAAAAATATTGCATTTAATCATAATCAGTGTTAATATATACTTAATAAATTTGAAAGATAAATTTAAGGTTTTATCTACTAAAAATAGGGAGTGATTATAATGAGTTTTTTAGGACAAGTTAGAAAGAAAGCCTTACAAGCAAACAGAAGAATAGTTTTACCTGAATCAAGTGATGAAAGAGTAATAAGAGCAACTTCACAAATTTTAAAAGAAGGTTTAGCACAAGTTATTCTTGTAGGAAATCATGAAACAATAATGAATAGTGCAAAAGCTTATGAAGTTTCATTAAGTGGAGTAAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //