Array 1 82834-82622 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKYU01000014.1 Humitalea rosea strain DSM 24525 Ga0183458_114, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 82833 29 96.6 32 C............................ GCGCTCGGCTGGTTCCCGCTAGCTGCCAGGGT 82772 29 100.0 32 ............................. GCGTTCCGCGCCGGGGCGCGTGCCGAACGCGC 82711 29 100.0 32 ............................. TGGAGCCGTGGCCCGGCATCACGTCGCGACGT 82650 29 89.7 0 ..A......C.G................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.6 32 GCGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CCGAGCGGGTGGAGATGCCCTGGACGTAGGCCTCCTGGATCACCGCCGTCAGCGCCTTCTCAGCTGTCCGGCGCGGCTCCAGGAAGGCCGGGAAGTAGGAGCCGCGGCGAAGCCTGGGGATCCGCAGTTCAACAGTGCCGGCCCGGGTCTGCCAGTCGCGGTCCCGGTAGCCGTTGCGCTGCAGCAGCCTCTCCGGGCTGCGCTCGCCATGGGCGGCGCCGGTCACCTCGCCCACCTCCAACTCCATCAGGCGCTGGGCGGCAAATCCGATCATCTCGCGCAGGAAGGTGGCGTCGGAGCCCTTTTCCAGGAGGTCCCGCAGGGCGATCTTGTCGTCGGTCATCGTGGTCGATCCAAGGCTTGGGGTTGCAGGTCTCAGCAACCCAACCCTACCGAAGATCACCGCGGTGGCCGCCCGGGGGCGCTCCGCTCCGCTCAGCCAGGGGCTTCGCTACGCGCCCCAGGCTCTGGACCTCCTACACCACCACCGGGGACACGAC # Right flank : ACGCCAACCGCTCCAAACCGATGCGCTACACCGCGTTCTCCCAGGCGCTCAGGCAGTGTCCGCCTCAGCCGCCTGTCGAGCCGAGACGGAGCTGGGGCGGCACCGAGGCGGACGACCGCCCCTCGCCCTCAGGCCTCAGCCAGGACCGTGCCGCGCGCGGTCAGCACATAGCCACGATGCTCGGCGAAATGCTCGGAGACCGGCCAGCGCTCATGGAACTTCAGCCAAAGGCGCAGCATGTGGCGCTGCTGGCTGCGCTCCGGACCATCGGCGAATTCGGTGCGCGAATGCAGCACGGTGTAGTTGTTGCAGAATTCCATGTCGCCGGGCCGCAGCATGAAATCCAACCGCAGATCCTCCCGCTGCGTCTGGGCATCGAGGAAGTCGAGCGCCTCCGTCTCCATCGCCGTCAACGGCACGCCGCGCTTCACCGCGCCGGCATTGATCTGGTTGCGCAGGTAACGGCAGCTCACGATCCCGTCCGTCTGGCCGAAGACCGG # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 89809-84290 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKYU01000014.1 Humitalea rosea strain DSM 24525 Ga0183458_114, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 89808 29 100.0 32 ............................. TCCATACGGCTCTGCGTCGTGCATGATGCCGA 89747 29 100.0 32 ............................. GTGGAGGAGGAGGCTCACGGTAGCACGATGCC 89686 29 100.0 32 ............................. ATGGCGGGGGTTGCTGAGCGCGGCAGACCAAC 89625 29 100.0 32 ............................. CTGTTGCGCAGGGTGCGCTGCGCGGCCGGCCA 89564 29 100.0 32 ............................. CCCGCTGTCCATCCGATAGGGGGTCGCGGTGA 89503 29 100.0 32 ............................. GGGGCCGGAGCTCCCAATCCCGTCTTCATCCA 89442 29 100.0 32 ............................. TAGAGGGAGGGGATCATAGCATGCGCGCCTTC 89381 29 100.0 32 ............................. AGCGCGTCGGCGGTGGCGGAGCACGCGCTGGT 89320 29 100.0 32 ............................. AGGGCATGCTGGCCGGGATCAGCATCGCAATG 89259 29 100.0 32 ............................. GGCTACACCGCGACCGCCGATGTCTGGCGCAC 89198 29 100.0 32 ............................. CCACTGCTGTTGACGGTGGAGGTGCTGCCGGA 89137 29 100.0 32 ............................. CAGGTCAGGGCGACGAAGCGCATCTTCTTCGC 89076 29 100.0 32 ............................. CCCGGGCTGGTGGTTGGGCTGCAACTCAACAC 89015 29 100.0 32 ............................. CAGCGCCGCAATCTGATCGATGGGCAGGTCAT 88954 29 100.0 32 ............................. GTGATGATCTGGCCGGACGTGCTCACGCAGAG 88893 29 100.0 32 ............................. ATTTCCTTCTTCGTGTCGGGGTCCAGGGTCGT 88832 29 100.0 32 ............................. GCGTCCTTCAGCATCGAGCGCGCGAAGGAGAC 88771 29 100.0 32 ............................. GACTGGGGCGCGGCGCAGCGCACCCTGCGCAA 88710 29 100.0 32 ............................. TCTCAGCGTTCGCCGTCTTGTGGTCGGTGAAA 88649 29 100.0 32 ............................. GAATACCCTTGGCCGCTCATGCAGCCGGGAGA 88588 29 100.0 32 ............................. CCGATCGGATGGGCCGAGGAAATGGGCCAGAT 88527 29 100.0 32 ............................. GTATATGGCTCGTGGGAAAAAGCTGGAAGGAT 88466 29 96.6 32 ............................C ATTTGTGCAGAGTTCGGCCGTAGGCCGGGGAC 88405 29 100.0 32 ............................. CCGTTTCACATCAGGTCCGTTGTGCATAGATG 88344 29 100.0 32 ............................. GCAGAGCGGCAGCAGCGGCAGGGCATGGCGCC 88283 29 100.0 32 ............................. GCTGGAGATCGGCTATGGGTGCGGGAGGCGTG 88222 29 100.0 32 ............................. CGAAATTCACGAACTGGTCCCCGTAGACCAGC 88161 29 100.0 32 ............................. GCACAAACTGCCGCCGACGCGCTCCGTGCTGC 88100 29 100.0 32 ............................. ATCCAGAATACCCCCGCCGTCCGGGCGCGGGT 88039 29 100.0 32 ............................. GTCTATTTGGGCAAGCAGGTCGGCAATGGCTC 87978 29 100.0 32 ............................. GTTAAAAAACGTGGTTTCGGGAGTGCGCTCGT 87917 29 100.0 32 ............................. AGGCGGCGAATGCCAGAGCCCTAAATAATGCC 87856 29 100.0 32 ............................. TGCAGGTTCCTCTAATTCCGCAGGCGCTCAGG 87795 29 100.0 32 ............................. TCCCCGGCCTGCGGCCGGAACAGATGCACAAG 87734 29 100.0 32 ............................. CAGGTCGGCAATGCATCGCAGATGCTCACGGA 87673 29 100.0 32 ............................. AGGGCGGATGCTGTCCCGCCGATCAACCAGAC 87612 29 96.6 32 ............................C ACTGCGCCAGTCATTGGTCGAGGCCGTAATGC 87551 29 100.0 32 ............................. GTTTGCCTGCTTGGGACGGAGTTCCCAGGGTT 87490 29 100.0 32 ............................. ACCGCCTGCTGGCCCTCGGCATTACCTACGAC 87429 29 100.0 32 ............................. GCCCGATTATAGGGGCCGCAGGCGGTGGGTAT 87368 29 100.0 32 ............................. GCGCCAAACCGAAACACTGAGCGCCCCAACAA 87307 29 96.6 32 ............................T TGACGATCGACGACACCTCCCCGAGCGTCACG 87246 29 100.0 32 ............................. GCCGAGAGGTTGCCCGGCCGCGGCGCGGGGGG 87185 29 100.0 32 ............................. GTTGGATCCTATCCCGACGCCGACCAGGCGAT 87124 29 100.0 32 ............................. GTCGAGGCGCCATGGGCGCGGATCGCGGGTGA 87063 29 100.0 32 ............................. CACAGCCGCTCCACATCCCCGCCGTGCCGCGC 87002 29 100.0 32 ............................. CCCCAACGGTCGCTGGTGACGAAGCCAACGTC 86941 29 100.0 32 ............................. TCATCGGGATGCCGAGGCCGGCGAGAGCGCCT 86880 29 96.6 32 .......T..................... GTGGTGGTTGTGTTGCAGCGGCTCGGGCTGCC 86819 29 100.0 32 ............................. GTCCGCATCAGCATGGAGGAATGGCGGTGAGC 86758 29 96.6 32 ............................A CGGCGCTGATCTGCGGGCAGAGGTATGGGGTC 86697 29 100.0 32 ............................. GGGTTTGCGCCCGTAGAGGCATCCCTTACCAA 86636 29 100.0 32 ............................. CCGCCGGACAGATTCCAGCGTGGGAACTCCCC 86575 29 100.0 32 ............................. AAGAGATCGCCTGGTCGGGCCATAACGGGCGC 86514 29 100.0 32 ............................. CTGCCGATGAGATTTTCGACCGGCATCTGACG 86453 29 100.0 32 ............................. CATTCGATGAGGCGGGGGAGGTTAGGCCGGGC 86392 29 100.0 32 ............................. CTCTCGAATCCCTTCACCATCTCGATCAGCGC 86331 29 100.0 32 ............................. GTTGCCGCTCCTTCGTTCATCGGTTCGCCCTG 86270 29 100.0 32 ............................. GCAGACTACCCAACATCGGGCACTCGTGGGGT 86209 29 96.6 32 ............................A GCGTAGAGGGAAACCTGATCCGCCCCTTCGGG 86148 29 100.0 32 ............................. TAGGAATCGTCGTAGCCGCGCACGCGCACTTC 86087 29 100.0 32 ............................. ACCAACTGGCGCTGCGTCAGTGGGCGATCGAG 86026 29 100.0 32 ............................. ACCCAAAACTTGCGGCAGAAGAAGTCGCCGCC 85965 29 96.6 32 ........................C.... GTGCACCGGGATGCATGCCCTCCGCCGACTCT 85904 29 100.0 32 ............................. CACCCCGCCAGCCGAAGGGCCGCACGCACTTC 85843 29 100.0 32 ............................. TCATCGCGATCTCATTTACGGTCGAGCAGAGT 85782 29 100.0 32 ............................. GAGAAGGGTGAAGCCCAGGCCCGCGCCGCCAC 85721 29 100.0 32 ............................. TTTTTCGTTTCCTCCCCAGCCGTATCGCGGTG 85660 29 100.0 32 ............................. GCCCGGAGCATCCCCACGGCATAGGCTTGCGC 85599 29 100.0 32 ............................. AAAAATCCCAGGTCCGGCTAGGAACCTGGGAA 85538 29 100.0 32 ............................. GTGGGGTGCGATGCGACGAAGCCGGGGTTAGC 85477 29 100.0 32 ............................. CTGCAGATCAACGGCTCGATCAGCAGCACCAC 85416 29 100.0 32 ............................. GCCGTCCTTTGCAGGTAAAGGAACCGCGCCGC 85355 29 100.0 32 ............................. CGTCTGGCGCAGGAACGGGCCATGCGGGAGCT 85294 29 100.0 32 ............................. GCACCGGCGCGGCTGAACTTCGGGCGCCCCTT 85233 29 96.6 32 ............................T ACAGCTCCGGCCGCCGCGTCGCGGTGCATGAA 85172 29 100.0 32 ............................. CCGAGTGCCGCAATCGCCCACACAAACGCCGT 85111 29 100.0 32 ............................. GCCCTGGCTGATCCGACCGTCCGCGCCATCGT 85050 29 100.0 32 ............................. ACGCAGATCGCATCGCCCTTGCCCAGGAACAC 84989 29 100.0 32 ............................. GGCCAGCCTGGAGGCATCGCGGCCGATCGCCT 84928 29 100.0 32 ............................. GTGATGCTCTGCAGGTCGGCCATCGCTCAGGC 84867 29 100.0 32 ............................. GACAGATCGACCTTCAACGGTGGAGCTTGCTC 84806 29 100.0 32 ............................. ATGCTCGGAACCGATACCTACGAGCGCGTGAC 84745 29 96.6 32 .......................T..... GGATATCCGTGACATTCGACCTGCTGAGCTTG 84684 29 100.0 32 ............................. TTGGATGCCGAGAACGGCCGCCTCTACTCTGT 84623 29 100.0 32 ............................. GAGATGGCCGAGGGCCGCGCCTACGAGCCGCG 84562 29 100.0 32 ............................. GTCTCCGTCTCTACGGCCGGCGCCGGCCGCGC 84501 29 100.0 32 ............................. GAACTTGGGTATGACCTTCCTCATCCATATCC 84440 29 100.0 32 ............................. GATTTCCAGCGCCTGGTCTCCATTAGCGCGGT 84379 29 100.0 32 ............................. GCGCTGCCTTGGGTGCCGGTCTGGCCCACCGC 84318 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 91 29 99.7 32 GCGTTCCCCGCACACGCGGGGATGAACCG # Left flank : AGGTGCTGACGGCCGGTGGCCTGCCGATGCCGGGGGCGCCGCCCGAGGCCATGCCCGTTGCGATCGATGGGCCGGAGGAGATGGGCGATGCTGGTCATCGTGGTTGAGAACGCGCCGCCCAGGTTGCGTGGCCGATTGGCCGTCTGGCTGCTGGAGGTGCGGGCGGGAGTCTATATCGGCGACTACGGGCGACGGGTCCGGGAGATGATCTGGGGCGAGGTTTGCGGATACATTGAGGACGGCAATGCCGTGCTGGCCTGGTCGGCCCCGAATGAGGTGGGCTTCCACTTCGATACCTGTGGCAAGAACAGGCGCGTTCCGATCGACCTGGATGGCTTGCGGCTGGTGAGTTTCACGGCCGACGCAGCGCTGCCATCGGAGGCTGGTCCCGCCTCGGTGCCTTCACGTGGACGAGGCCGCGGGCGAGGCTAACGCGGCGCGATTTCGGTGAGTTGTTTGACATGGGGATAGGCTTTGTAAATCAATAGGCTCTGGTCAGA # Right flank : GATTGTAGCAGCCATCTCCGCCGCCCACCCCGGCGTTCCCCGATCGTGTCCCATCGCGTGGTGTAGGAGCGATGATCCTCGGCGGGTTGGGCCGCCGCGTCAGGCTGGCACGGCGGACAGGCTGACGGGGGCAGTGTTGCTGACGGAGCCGATGGTTTCCAGGGTCATGTAGCGGGCGCGCTGGGTGGCCCATTCGTCGGATTGCTCGAGCAGGATGGCCCCGACGAGGCGGAGCACGGCGGCCTCGTTGGGGAATATGCCGACGACATTCGTTCGGCGCTTGATTTCCCCGTTCAGCCGCTCGATCGGGTTTGTGCTGTGCAACTTGGCCCGATGTGCGGCGGGGAAGTGCATATAGGCCAGCACGTCCTCCTCGGCGGTGTCCATCAGGGCTGCGAGCTTGGGCACCTTGGGGCGGAGCTGGTCGGCGACGGTGCGCCACTGGGCGTGGGCCGCGGCGGCGTCCCCTTCGGCATAGGCGGTTCCGATCCAGGCGGAGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //