Array 1 3923431-3924923 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGLO01000001.1 Klebsiella pneumoniae strain NCTC9134, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3923431 29 100.0 32 ............................. CGGCGTAATTCGCGCCAGACCGACACCGGCGC 3923492 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGTG 3923553 29 100.0 32 ............................. CAGGGCGGCGTTGTTCCACCGCTTGAGGTGGT 3923614 29 100.0 32 ............................. CCATTTCCCCGAGTCAAAATCAGTAAAAAAAT 3923675 29 100.0 32 ............................. GCGCGCGCCTCTTCGAGTTGTCGTATCAGCGA 3923736 29 100.0 32 ............................. GCTATTGACGGGCTGAAAGAGGTGCAGGAGGC 3923797 29 100.0 32 ............................. CATTTCAGGCGGCAGGGCGCGCACAACTTGCC 3923858 29 100.0 32 ............................. CATACAGTATTATCATAGCGAATTCCCATTGG 3923919 29 100.0 32 ............................. CCACCGAACTGGCCGTGCACATTCACCTCAAA 3923980 29 100.0 32 ............................. GCGCTCGACCGCCAGACAATCGGCTTTAACGG 3924041 29 96.6 32 .............T............... TTTGCGGAAAAAGTGGCCGCGTATTCCGGATT 3924102 29 100.0 32 ............................. AGTGCTACACCGATACTGGCCCATCATTCCAG 3924163 29 100.0 31 ............................. TCGATCCCCACGGTTGAGAAATTATTGACCC A [3924191] 3924224 29 100.0 32 ............................. TGCAGGGATTGGCTGGCTGTACTTATGCACCA 3924285 29 100.0 32 ............................. AATTCCCGCGCCAGTCTGCCGCACAGTGGAAT 3924346 29 100.0 32 ............................. CGGAGGGTTGCCAACCGATGATTTCAGCAAGG 3924407 29 96.6 32 ............................C CCTGAATCCGTCAACGTTTGGAGTCTTGAGTT 3924468 29 96.6 32 .........A................... AAATAATCGTGCTGCTCTGACGTACCGGGCAC 3924529 29 100.0 32 ............................. CGCTTCAGGGAGAAGAAACTTCCTTCGGCGCC 3924590 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 3924651 29 96.6 32 ..........A.................. ACGGTAATTATTTATGCCCTGGATAATATTGG 3924712 29 96.6 32 .......T..................... TCTGACTGTCGAGGCATGATCTGCCCTCCGAT 3924773 29 96.6 32 A............................ ACGGCCCGACAGAACGGCGCTGGAATCTCTCG 3924834 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 3924895 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 25 29 98.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGTTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGTGATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //